RNA–Protein interactions for RNA: ENST00000514232.1

SMARCAD1-208, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 3

Gene SMARCAD1, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-208ENST00000514232 KRTAP12-3P60328 96 aa0.93□□□□□ -2.26
SMARCAD1-208ENST00000514232 SNRPD3P62318 126 aaKnown RBP0.93□□□□□ -2.26
SMARCAD1-208ENST00000514232 MRPS36P82909 103 aaKnown RBP0.93□□□□□ -2.26
SMARCAD1-208ENST00000514232 MIAQ16674 131 aa0.93□□□□□ -2.26
SMARCAD1-208ENST00000514232 SOSTDC1Q6X4U4 206 aa0.93□□□□□ -2.26
SMARCAD1-208ENST00000514232 Q8N2B8 174 aa0.93□□□□□ -2.26
SMARCAD1-208ENST00000514232 Q8NDZ9 215 aa0.93□□□□□ -2.26
SMARCAD1-208ENST00000514232 LINC00308Q8TCZ7 52 aa0.93□□□□□ -2.26
SMARCAD1-208ENST00000514232 SMCR5Q8TEV8 140 aa0.93□□□□□ -2.26
SMARCAD1-208ENST00000514232 DYNLRB2Q8TF09 96 aa0.93□□□□□ -2.26
SMARCAD1-208ENST00000514232 SPANXDQ9BXN6 97 aa0.93□□□□□ -2.26
SMARCAD1-208ENST00000514232 ASH1LQ9NR48 2969 aaKnown RBP0.93□□□□□ -2.26
SMARCAD1-208ENST00000514232 SPANXCQ9NY87 97 aa0.93□□□□□ -2.26
SMARCAD1-208ENST00000514232 TOMM7Q9P0U1 55 aa0.93□□□□□ -2.26
SMARCAD1-208ENST00000514232 KLK5Q9Y337 293 aaPredicted RBP0.93□□□□□ -2.26
SMARCAD1-208ENST00000514232 CELSR1Q9NYQ6 3014 aa0.93□□□□□ -2.26
SMARCAD1-208ENST00000514232 KMT2AQ03164 3969 aa0.93□□□□□ -2.26
SMARCAD1-208ENST00000514232 USP9YO00507 2555 aaPredicted RBP0.93□□□□□ -2.26
SMARCAD1-208ENST00000514232 NCOR2Q9Y618 2525 aa0.92□□□□□ -2.26
SMARCAD1-208ENST00000514232 ALMS1Q8TCU4 4167 aa0.92□□□□□ -2.26
SMARCAD1-208ENST00000514232 USP9XQ93008 2570 aaPredicted RBP0.92□□□□□ -2.26
SMARCAD1-208ENST00000514232 FAM208BQ5VWN6 2430 aa0.92□□□□□ -2.26
SMARCAD1-208ENST00000514232 A0A096LPF7 62 aa0.92□□□□□ -2.26
SMARCAD1-208ENST00000514232 FAM236AA0A1B0GUQ0 79 aa0.92□□□□□ -2.26
SMARCAD1-208ENST00000514232 FAM236BA0A1B0GV22 79 aa0.92□□□□□ -2.26
SMARCAD1-208ENST00000514232 A0A1B0GW54 56 aa0.92□□□□□ -2.26
SMARCAD1-208ENST00000514232 B4DSR2 109 aa0.92□□□□□ -2.26
SMARCAD1-208ENST00000514232 C8orf87E5RJ46 101 aa0.92□□□□□ -2.26
SMARCAD1-208ENST00000514232 H3BT86 120 aa0.92□□□□□ -2.26
SMARCAD1-208ENST00000514232 COX7A2LO14548 114 aa0.92□□□□□ -2.26
SMARCAD1-208ENST00000514232 NCR3O14931 201 aa0.92□□□□□ -2.26
SMARCAD1-208ENST00000514232 NDUFA1O15239 70 aa0.92□□□□□ -2.26
SMARCAD1-208ENST00000514232 BRI3O95415 125 aa0.92□□□□□ -2.26
SMARCAD1-208ENST00000514232 PRB1P04280 392 aa0.92□□□□□ -2.26
SMARCAD1-208ENST00000514232 HERVK_113P63121 156 aa0.92□□□□□ -2.26
SMARCAD1-208ENST00000514232 CIRBPQ14011 172 aaKnown RBP0.92□□□□□ -2.26
SMARCAD1-208ENST00000514232 DEFB114Q30KQ6 69 aa0.92□□□□□ -2.26
SMARCAD1-208ENST00000514232 DEFB121Q5J5C9 76 aa0.92□□□□□ -2.26
SMARCAD1-208ENST00000514232 Q6Q795 121 aa0.92□□□□□ -2.26
SMARCAD1-208ENST00000514232 CLPSL2Q6UWE3 100 aa0.92□□□□□ -2.26
SMARCAD1-208ENST00000514232 Q6ZTI0 123 aa0.92□□□□□ -2.26
SMARCAD1-208ENST00000514232 C5orf38Q86SI9 138 aa0.92□□□□□ -2.26
SMARCAD1-208ENST00000514232 C1orf158Q8N1D5 194 aa0.92□□□□□ -2.26
SMARCAD1-208ENST00000514232 OR13C6PQ8NH95 151 aa0.92□□□□□ -2.26
SMARCAD1-208ENST00000514232 WFDC10AQ9H1F0 79 aa0.92□□□□□ -2.26
SMARCAD1-208ENST00000514232 C11orf68Q9H3H3 251 aaKnown RBP0.92□□□□□ -2.26
SMARCAD1-208ENST00000514232 NOP10Q9NPE3 64 aaKnown RBP0.92□□□□□ -2.26
SMARCAD1-208ENST00000514232 CDC42SE2Q9NRR3 84 aa0.92□□□□□ -2.26
SMARCAD1-208ENST00000514232 SPANXA1Q9NS26 97 aa0.92□□□□□ -2.26
SMARCAD1-208ENST00000514232 C22orf24Q9Y442 160 aa0.92□□□□□ -2.26
SMARCAD1-208ENST00000514232 TLN2Q9Y4G6 2542 aa0.91□□□□□ -2.26
SMARCAD1-208ENST00000514232 HRNRQ86YZ3 2850 aaPredicted RBP0.91□□□□□ -2.26
SMARCAD1-208ENST00000514232 CEP295Q9C0D2 2601 aa0.91□□□□□ -2.26
SMARCAD1-208ENST00000514232 CR1P17927 2039 aa0.91□□□□□ -2.26
SMARCAD1-208ENST00000514232 ACACBO00763 2458 aa0.91□□□□□ -2.26
SMARCAD1-208ENST00000514232 NAV2Q8IVL1 2488 aa0.91□□□□□ -2.26
SMARCAD1-208ENST00000514232 POLQO75417 2590 aa0.91□□□□□ -2.26
SMARCAD1-208ENST00000514232 A0A087WVE0 104 aa0.91□□□□□ -2.26
SMARCAD1-208ENST00000514232 A0A096LNT2 108 aa0.91□□□□□ -2.26
SMARCAD1-208ENST00000514232 TRAV13-2A0A0B4J235 113 aa0.91□□□□□ -2.26
SMARCAD1-208ENST00000514232 TRBV7-7A0A0K0K1E9 115 aa0.91□□□□□ -2.26
SMARCAD1-208ENST00000514232 hADV29S1A0JD25 119 aa0.91□□□□□ -2.26
SMARCAD1-208ENST00000514232 F5H768 121 aa0.91□□□□□ -2.26
SMARCAD1-208ENST00000514232 TIMM17BO60830 172 aa0.91□□□□□ -2.26
SMARCAD1-208ENST00000514232 CRPP02741 224 aa0.91□□□□□ -2.26
SMARCAD1-208ENST00000514232 FUSP35637 526 aaKnown RBP eCLIP0.91□□□□□ -2.26
SMARCAD1-208ENST00000514232 RPL28P46779 137 aaKnown RBP0.91□□□□□ -2.26
SMARCAD1-208ENST00000514232 CCL18P55774 89 aa0.91□□□□□ -2.26
SMARCAD1-208ENST00000514232 LINC00158P58513 81 aa0.91□□□□□ -2.26
SMARCAD1-208ENST00000514232 KRTAP12-4P60329 112 aa0.91□□□□□ -2.26
SMARCAD1-208ENST00000514232 HIST1H4AP62805 103 aaKnown RBP0.91□□□□□ -2.26
SMARCAD1-208ENST00000514232 C9orf153Q5TBE3 101 aa0.91□□□□□ -2.26
SMARCAD1-208ENST00000514232 WFDC9Q8NEX5 89 aa0.91□□□□□ -2.26
SMARCAD1-208ENST00000514232 SMIM11BQ8TCY0 68 aa0.91□□□□□ -2.26
SMARCAD1-208ENST00000514232 COX7B2Q8TF08 81 aa0.91□□□□□ -2.26
SMARCAD1-208ENST00000514232 ZCCHC13Q8WW36 166 aaKnown RBP0.91□□□□□ -2.26
SMARCAD1-208ENST00000514232 LINC01600Q96MT4 127 aa0.91□□□□□ -2.26
SMARCAD1-208ENST00000514232 CYSTM1Q9H1C7 97 aa0.91□□□□□ -2.26
SMARCAD1-208ENST00000514232 C14orf132Q9NPU4 83 aa0.91□□□□□ -2.26
SMARCAD1-208ENST00000514232 LINC00846Q9NV44 126 aa0.91□□□□□ -2.26
SMARCAD1-208ENST00000514232 SACSQ9NZJ4 4579 aa0.91□□□□□ -2.26
SMARCAD1-208ENST00000514232 SPTBN4Q9H254 2564 aa0.91□□□□□ -2.26
SMARCAD1-208ENST00000514232 JMJD1CQ15652 2540 aa0.9□□□□□ -2.26
SMARCAD1-208ENST00000514232 ZNF292O60281 2723 aa0.9□□□□□ -2.26
SMARCAD1-208ENST00000514232 PRKDCP78527 4128 aaKnown RBP0.9□□□□□ -2.26
SMARCAD1-208ENST00000514232 CCDC168Q8NDH2 2452 aa0.9□□□□□ -2.27
SMARCAD1-208ENST00000514232 CHD8Q9HCK8 2581 aa0.9□□□□□ -2.27
SMARCAD1-208ENST00000514232 TRGV2A0A075B6R0 118 aa0.9□□□□□ -2.27
SMARCAD1-208ENST00000514232 LINC00959A0A1B0GUT2 108 aa0.9□□□□□ -2.27
SMARCAD1-208ENST00000514232 A0A1B0GX51 115 aa0.9□□□□□ -2.27
SMARCAD1-208ENST00000514232 A8MTW9 85 aa0.9□□□□□ -2.27
SMARCAD1-208ENST00000514232 M0R2N4 97 aa0.9□□□□□ -2.27
SMARCAD1-208ENST00000514232 UQCRQO14949 82 aa0.9□□□□□ -2.27
SMARCAD1-208ENST00000514232 DEFB4AO15263 64 aa0.9□□□□□ -2.27
SMARCAD1-208ENST00000514232 DNAL4O96015 105 aa0.9□□□□□ -2.27
SMARCAD1-208ENST00000514232 TRACP01848 142 aa0.9□□□□□ -2.27
SMARCAD1-208ENST00000514232 ACYP1P07311 99 aa0.9□□□□□ -2.27
SMARCAD1-208ENST00000514232 DEFB130BP0DP73 79 aa0.9□□□□□ -2.27
SMARCAD1-208ENST00000514232 DEFB130AP0DP74 79 aa0.9□□□□□ -2.27
SMARCAD1-208ENST00000514232 COX7CP15954 63 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms