RNA–Protein interactions for RNA: ENST00000513946.1

PROM1-216, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-216ENST00000513946 PLXNB1O43157 2135 aa2.06□□□□□ -2.08
PROM1-216ENST00000513946 CADP27708 2225 aa2.06□□□□□ -2.08
PROM1-216ENST00000513946 PLCE1Q9P212 2302 aa2.06□□□□□ -2.08
PROM1-216ENST00000513946 IGLV1-50A0A075B6I6 118 aa2.06□□□□□ -2.08
PROM1-216ENST00000513946 PRR3P79522 188 aaKnown RBP2.06□□□□□ -2.08
PROM1-216ENST00000513946 FAM229BQ4G0N7 80 aa2.06□□□□□ -2.08
PROM1-216ENST00000513946 LINC01556Q5JQF7 62 aa2.06□□□□□ -2.08
PROM1-216ENST00000513946 C9orf163Q8N9P6 203 aa2.06□□□□□ -2.08
PROM1-216ENST00000513946 DEFB105AQ8NG35 78 aa2.06□□□□□ -2.08
PROM1-216ENST00000513946 C6orf48Q9UBA6 75 aa2.06□□□□□ -2.08
PROM1-216ENST00000513946 KLK12Q9UKR0 248 aa2.06□□□□□ -2.08
PROM1-216ENST00000513946 ABCA4P78363 2273 aa2.05□□□□□ -2.08
PROM1-216ENST00000513946 A0A1B0GU69 56 aa2.05□□□□□ -2.08
PROM1-216ENST00000513946 K7EQZ3 153 aa2.05□□□□□ -2.08
PROM1-216ENST00000513946 SPRR1BP22528 89 aa2.05□□□□□ -2.08
PROM1-216ENST00000513946 WFDC10BQ8IUB3 73 aa2.05□□□□□ -2.08
PROM1-216ENST00000513946 TPRP12270 2363 aaKnown RBP2.05□□□□□ -2.08
PROM1-216ENST00000513946 HTTP42858 3142 aa2.04□□□□□ -2.08
PROM1-216ENST00000513946 IGLV10-54A0A075B6I4 117 aa2.04□□□□□ -2.08
PROM1-216ENST00000513946 A0A1W2PNM2 257 aa2.04□□□□□ -2.08
PROM1-216ENST00000513946 TRANK1O15050 2925 aa2.04□□□□□ -2.08
PROM1-216ENST00000513946 A0A087WSZ3 146 aa2.03□□□□□ -2.08
PROM1-216ENST00000513946 LRCOL1A6NCL2 159 aa2.03□□□□□ -2.08
PROM1-216ENST00000513946 SPATA8Q6RVD6 105 aa2.03□□□□□ -2.08
PROM1-216ENST00000513946 C15orf56Q8N910 161 aa2.03□□□□□ -2.08
PROM1-216ENST00000513946 PLAC8Q9NZF1 115 aa2.03□□□□□ -2.08
PROM1-216ENST00000513946 BRCA2P51587 3418 aa2.03□□□□□ -2.09
PROM1-216ENST00000513946 ARHGAP32A7KAX9 2087 aa2.02□□□□□ -2.09
PROM1-216ENST00000513946 MIR22HGQ0VDD5 57 aa2.02□□□□□ -2.09
PROM1-216ENST00000513946 DEFB113Q30KQ7 82 aa2.02□□□□□ -2.09
PROM1-216ENST00000513946 CLPSL2Q6UWE3 100 aa2.02□□□□□ -2.09
PROM1-216ENST00000513946 C7orf33Q8WU49 177 aa2.02□□□□□ -2.09
PROM1-216ENST00000513946 ANKHD1Q8IWZ3 2542 aaKnown RBP2.02□□□□□ -2.09
PROM1-216ENST00000513946 MAP1BP46821 2468 aaKnown RBP2.01□□□□□ -2.09
PROM1-216ENST00000513946 ICE1Q9Y2F5 2266 aa2.01□□□□□ -2.09
PROM1-216ENST00000513946 SVILO95425 2214 aa2.01□□□□□ -2.09
PROM1-216ENST00000513946 A0A096LPF7 62 aa2.01□□□□□ -2.09
PROM1-216ENST00000513946 IGKV2-24A0A0C4DH68 120 aa2.01□□□□□ -2.09
PROM1-216ENST00000513946 KRTAP4-16G5E9R7 235 aaPredicted RBP2.01□□□□□ -2.09
PROM1-216ENST00000513946 KRTAP5-8O75690 187 aa2.01□□□□□ -2.09
PROM1-216ENST00000513946 DEFB136Q30KP8 78 aa2.01□□□□□ -2.09
PROM1-216ENST00000513946 IGFL1Q6UW32 110 aa2.01□□□□□ -2.09
PROM1-216ENST00000513946 PP632Q6XCG6 107 aa2.01□□□□□ -2.09
PROM1-216ENST00000513946 WFDC13Q8IUB5 93 aa2.01□□□□□ -2.09
PROM1-216ENST00000513946 MRPL34Q9BQ48 92 aaKnown RBP2.01□□□□□ -2.09
PROM1-216ENST00000513946 LINC00472Q9H8W2 130 aa2.01□□□□□ -2.09
PROM1-216ENST00000513946 CHD7Q9P2D1 2997 aa2.01□□□□□ -2.09
PROM1-216ENST00000513946 CHD9Q3L8U1 2897 aa2□□□□□ -2.09
PROM1-216ENST00000513946 WDR87Q6ZQQ6 2873 aa2□□□□□ -2.09
PROM1-216ENST00000513946 RANBP2P49792 3224 aaKnown RBP2□□□□□ -2.09
PROM1-216ENST00000513946 MKI67P46013 3256 aaKnown RBP2□□□□□ -2.09
PROM1-216ENST00000513946 IGHV6-1A0A0B4J1U7 121 aa2□□□□□ -2.09
PROM1-216ENST00000513946 M0R2N4 97 aa2□□□□□ -2.09
PROM1-216ENST00000513946 LINC00313P59037 77 aa2□□□□□ -2.09
PROM1-216ENST00000513946 DMAC1Q96GE9 116 aa2□□□□□ -2.09
PROM1-216ENST00000513946 SDK1Q7Z5N4 2213 aa2□□□□□ -2.09
PROM1-216ENST00000513946 CREBBPQ92793 2442 aa2□□□□□ -2.09
PROM1-216ENST00000513946 SZT2Q5T011 3432 aa1.99□□□□□ -2.09
PROM1-216ENST00000513946 A0A1B0GVX0 72 aa1.99□□□□□ -2.09
PROM1-216ENST00000513946 ST20-AS1Q8NBB2 130 aa1.99□□□□□ -2.09
PROM1-216ENST00000513946 C8orf17Q9NRJ1 99 aa1.99□□□□□ -2.09
PROM1-216ENST00000513946 POLEQ07864 2286 aa1.99□□□□□ -2.09
PROM1-216ENST00000513946 CEP290O15078 2479 aa1.99□□□□□ -2.09
PROM1-216ENST00000513946 DOPEY2Q9Y3R5 2298 aa1.98□□□□□ -2.09
PROM1-216ENST00000513946 CHTF8P0CG12 524 aa1.98□□□□□ -2.09
PROM1-216ENST00000513946 C10orf99Q6UWK7 81 aa1.98□□□□□ -2.09
PROM1-216ENST00000513946 COX6B2Q6YFQ2 88 aa1.98□□□□□ -2.09
PROM1-216ENST00000513946 ROS1P08922 2347 aa1.98□□□□□ -2.09
PROM1-216ENST00000513946 PKDREJQ9NTG1 2253 aa1.97□□□□□ -2.09
PROM1-216ENST00000513946 CEP250Q9BV73 2442 aa1.97□□□□□ -2.09
PROM1-216ENST00000513946 LAMA3Q16787 3333 aa1.97□□□□□ -2.09
PROM1-216ENST00000513946 SPTBN1Q01082 2364 aaKnown RBP1.97□□□□□ -2.09
PROM1-216ENST00000513946 MMP24-AS1A0A0U1RRL7 71 aa1.97□□□□□ -2.09
PROM1-216ENST00000513946 HTN3P15516 51 aa1.97□□□□□ -2.09
PROM1-216ENST00000513946 CASC10Q5T4H9 136 aa1.97□□□□□ -2.09
PROM1-216ENST00000513946 SSBP3-AS1Q7Z2R9 100 aa1.97□□□□□ -2.09
PROM1-216ENST00000513946 RP1L1Q8IWN7 2480 aaPredicted RBP1.97□□□□□ -2.09
PROM1-216ENST00000513946 LAMA2P24043 3122 aaKnown RBP1.97□□□□□ -2.09
PROM1-216ENST00000513946 CUL9Q8IWT3 2517 aa1.96□□□□□ -2.09
PROM1-216ENST00000513946 IGLV7-43P04211 117 aa1.96□□□□□ -2.1
PROM1-216ENST00000513946 HRES1P13985 223 aa1.96□□□□□ -2.1
PROM1-216ENST00000513946 DEFB135Q30KP9 77 aa1.96□□□□□ -2.1
PROM1-216ENST00000513946 KRTAP26-1Q6PEX3 210 aa1.96□□□□□ -2.1
PROM1-216ENST00000513946 Q8NDZ9 215 aa1.96□□□□□ -2.1
PROM1-216ENST00000513946 CACNA1HO95180 2353 aa1.96□□□□□ -2.1
PROM1-216ENST00000513946 SPTBN5Q9NRC6 3674 aaKnown RBP1.95□□□□□ -2.1
PROM1-216ENST00000513946 COL6A6A6NMZ7 2263 aa1.95□□□□□ -2.1
PROM1-216ENST00000513946 LY6G6CO95867 125 aa1.95□□□□□ -2.1
PROM1-216ENST00000513946 LINC00483Q53H64 154 aa1.95□□□□□ -2.1
PROM1-216ENST00000513946 PCOTHQ58A44 107 aa1.95□□□□□ -2.1
PROM1-216ENST00000513946 MUC3AQ02505 3323 aa1.94□□□□□ -2.1
PROM1-216ENST00000513946 SPINK7P58062 85 aa1.94□□□□□ -2.1
PROM1-216ENST00000513946 COL6A3P12111 3177 aa1.94□□□□□ -2.1
PROM1-216ENST00000513946 UNC80Q8N2C7 3258 aa1.94□□□□□ -2.1
PROM1-216ENST00000513946 CDH23Q9H251 3354 aa1.93□□□□□ -2.1
PROM1-216ENST00000513946 PTPRZ1P23471 2315 aaPredicted RBP1.93□□□□□ -2.1
PROM1-216ENST00000513946 PANO1I0J062 215 aa1.93□□□□□ -2.1
PROM1-216ENST00000513946 ROMO1P60602 79 aa1.93□□□□□ -2.1
PROM1-216ENST00000513946 TECTAO75443 2155 aa1.93□□□□□ -2.1
PROM1-216ENST00000513946 BDP1A6H8Y1 2624 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms