RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 HIST1H2BNQ99877 126 aa5.78□□□□□ -1.48
DDX41-216ENST00000513562 HIST1H2BMQ99879 126 aa5.78□□□□□ -1.48
DDX41-216ENST00000513562 HSBP1O75506 76 aa5.77□□□□□ -1.49
DDX41-216ENST00000513562 TMEM170BQ5T4T1 132 aa5.77□□□□□ -1.49
DDX41-216ENST00000513562 MIR7-3HGQ8N6C7 128 aa5.77□□□□□ -1.49
DDX41-216ENST00000513562 A0A096LNJ9 63 aa5.76□□□□□ -1.49
DDX41-216ENST00000513562 SERF1AO75920 110 aa5.76□□□□□ -1.49
DDX41-216ENST00000513562 S100A6P06703 90 aa5.76□□□□□ -1.49
DDX41-216ENST00000513562 KRTAP9-8Q9BYQ0 159 aa5.76□□□□□ -1.49
DDX41-216ENST00000513562 HBDP02042 147 aa5.75□□□□□ -1.49
DDX41-216ENST00000513562 DDTP30046 118 aa5.75□□□□□ -1.49
DDX41-216ENST00000513562 HRCT1Q6UXD1 115 aa5.75□□□□□ -1.49
DDX41-216ENST00000513562 SYNE2Q8WXH0 6885 aaKnown RBP5.74□□□□□ -1.49
DDX41-216ENST00000513562 MEIG1Q5JSS6 88 aa5.74□□□□□ -1.49
DDX41-216ENST00000513562 KRTAP19-1Q8IUB9 90 aa5.74□□□□□ -1.49
DDX41-216ENST00000513562 ST20-AS1Q8NBB2 130 aa5.74□□□□□ -1.49
DDX41-216ENST00000513562 TRBV10-2A0A0K0K1G8 114 aa5.73□□□□□ -1.49
DDX41-216ENST00000513562 C5orf52A6NGY3 159 aa5.73□□□□□ -1.49
DDX41-216ENST00000513562 JOSD1Q15040 202 aaPredicted RBP5.73□□□□□ -1.49
DDX41-216ENST00000513562 PMCHL1Q16048 86 aa5.73□□□□□ -1.49
DDX41-216ENST00000513562 URB1-AS1Q96HZ7 61 aa5.73□□□□□ -1.49
DDX41-216ENST00000513562 KRTAP3-3Q9BYR6 98 aa5.73□□□□□ -1.49
DDX41-216ENST00000513562 KRTAP3-2Q9BYR7 98 aa5.73□□□□□ -1.49
DDX41-216ENST00000513562 TMA7Q9Y2S6 64 aaKnown RBP5.73□□□□□ -1.49
DDX41-216ENST00000513562 TMEM223A0PJW6 202 aa5.72□□□□□ -1.49
DDX41-216ENST00000513562 S100A2P29034 98 aa5.72□□□□□ -1.49
DDX41-216ENST00000513562 COA6Q5JTJ3 125 aaKnown RBP5.72□□□□□ -1.49
DDX41-216ENST00000513562 MACF1Q9UPN3 7388 aaKnown RBP5.72□□□□□ -1.49
DDX41-216ENST00000513562 LOC107984156A0A0G2JMH3 177 aa5.71□□□□□ -1.5
DDX41-216ENST00000513562 LINC00587B1AMM8 73 aa5.71□□□□□ -1.5
DDX41-216ENST00000513562 LEPROTL1O95214 131 aa5.71□□□□□ -1.5
DDX41-216ENST00000513562 SPRR1BP22528 89 aa5.71□□□□□ -1.5
DDX41-216ENST00000513562 LINC00310P59036 64 aa5.71□□□□□ -1.5
DDX41-216ENST00000513562 HERV-K104P63124 156 aa5.71□□□□□ -1.5
DDX41-216ENST00000513562 ARL17AQ8IVW1 177 aa5.71□□□□□ -1.5
DDX41-216ENST00000513562 HSPB8Q9UJY1 196 aa5.71□□□□□ -1.5
DDX41-216ENST00000513562 CD164Q04900 197 aa5.7□□□□□ -1.5
DDX41-216ENST00000513562 Q6Q795 121 aa5.7□□□□□ -1.5
DDX41-216ENST00000513562 TRAV23DV6A0A075B6W5 121 aa5.69□□□□□ -1.5
DDX41-216ENST00000513562 C1orf195Q5TG92 126 aa5.69□□□□□ -1.5
DDX41-216ENST00000513562 Q5XG85 94 aa5.69□□□□□ -1.5
DDX41-216ENST00000513562 SLC25A34Q6PIV7 304 aa5.69□□□□□ -1.5
DDX41-216ENST00000513562 MAP1LC3CQ9BXW4 147 aa5.69□□□□□ -1.5
DDX41-216ENST00000513562 SPANXB1Q9NS25 103 aaPredicted RBP5.69□□□□□ -1.5
DDX41-216ENST00000513562 ZNF73O43830 326 aaPredicted RBP5.68□□□□□ -1.5
DDX41-216ENST00000513562 FABP4P15090 132 aa5.68□□□□□ -1.5
DDX41-216ENST00000513562 IFI27L1Q96BM0 104 aa5.68□□□□□ -1.5
DDX41-216ENST00000513562 CHTOPQ9Y3Y2 248 aaKnown RBP5.68□□□□□ -1.5
DDX41-216ENST00000513562 H0Y8G0 127 aa5.67□□□□□ -1.5
DDX41-216ENST00000513562 SNRPEP62304 92 aaKnown RBP5.67□□□□□ -1.5
DDX41-216ENST00000513562 S100A7L2Q5SY68 101 aa5.67□□□□□ -1.5
DDX41-216ENST00000513562 HIST3H2BBQ8N257 126 aa5.67□□□□□ -1.5
DDX41-216ENST00000513562 H7C2G1 150 aa5.66□□□□□ -1.5
DDX41-216ENST00000513562 LCE2BO14633 110 aa5.66□□□□□ -1.5
DDX41-216ENST00000513562 LAMTOR3Q9UHA4 124 aa5.66□□□□□ -1.5
DDX41-216ENST00000513562 MYMXA0A1B0GTQ4 84 aa5.65□□□□□ -1.5
DDX41-216ENST00000513562 NDUFC2O95298 119 aa5.65□□□□□ -1.5
DDX41-216ENST00000513562 HIST1H2BLQ99880 126 aa5.65□□□□□ -1.5
DDX41-216ENST00000513562 TRAV12-1A0A0B4J245 112 aa5.64□□□□□ -1.51
DDX41-216ENST00000513562 C20orf202A1L168 122 aa5.64□□□□□ -1.51
DDX41-216ENST00000513562 KRTDAPP60985 99 aa5.64□□□□□ -1.51
DDX41-216ENST00000513562 SMIM29Q86T20 159 aa5.64□□□□□ -1.51
DDX41-216ENST00000513562 MT2AP02795 61 aa5.63□□□□□ -1.51
DDX41-216ENST00000513562 MIEN1Q9BRT3 115 aa5.63□□□□□ -1.51
DDX41-216ENST00000513562 PRO1933Q9H354 126 aa5.63□□□□□ -1.51
DDX41-216ENST00000513562 SYS1-DBNDD2H3BUS1 97 aa5.62□□□□□ -1.51
DDX41-216ENST00000513562 HINT1P49773 126 aaPredicted RBP5.62□□□□□ -1.51
DDX41-216ENST00000513562 TSPEAR-AS2P59090 65 aa5.62□□□□□ -1.51
DDX41-216ENST00000513562 PET117Q6UWS5 81 aa5.62□□□□□ -1.51
DDX41-216ENST00000513562 C3orf79P0CE67 100 aa5.61□□□□□ -1.51
DDX41-216ENST00000513562 PLNP26678 52 aa5.61□□□□□ -1.51
DDX41-216ENST00000513562 AKR1D1P51857 326 aa5.61□□□□□ -1.51
DDX41-216ENST00000513562 Q1RN00 199 aa5.61□□□□□ -1.51
DDX41-216ENST00000513562 DHRS4-AS1Q9P1J3 65 aa5.61□□□□□ -1.51
DDX41-216ENST00000513562 DPM2O94777 84 aa5.6□□□□□ -1.51
DDX41-216ENST00000513562 IGKCP01834 107 aa5.59□□□□□ -1.51
DDX41-216ENST00000513562 MT1FP04733 61 aa5.59□□□□□ -1.51
DDX41-216ENST00000513562 LINC01545Q5VT33 79 aa5.59□□□□□ -1.51
DDX41-216ENST00000513562 SOSTDC1Q6X4U4 206 aa5.59□□□□□ -1.51
DDX41-216ENST00000513562 ATP11AUNQ6ZP68 121 aa5.59□□□□□ -1.51
DDX41-216ENST00000513562 PMCHL2Q9BQD1 86 aa5.59□□□□□ -1.51
DDX41-216ENST00000513562 KRTAP9-3Q9BYQ3 159 aa5.59□□□□□ -1.51
DDX41-216ENST00000513562 CBY1Q9Y3M2 126 aa5.59□□□□□ -1.51
DDX41-216ENST00000513562 HERVK_113P61574 105 aa5.58□□□□□ -1.52
DDX41-216ENST00000513562 Q75L30 129 aa5.58□□□□□ -1.52
DDX41-216ENST00000513562 LEPROTO15243 131 aa5.57□□□□□ -1.52
DDX41-216ENST00000513562 EIF4EBP3O60516 100 aaPredicted RBP5.57□□□□□ -1.52
DDX41-216ENST00000513562 SCGB1D1O95968 90 aa5.57□□□□□ -1.52
DDX41-216ENST00000513562 A0A0G2JQZ4 141 aa5.56□□□□□ -1.52
DDX41-216ENST00000513562 TEX49A0A1B0GTD5 131 aa5.56□□□□□ -1.52
DDX41-216ENST00000513562 HSBP1L1C9JCN9 74 aa5.56□□□□□ -1.52
DDX41-216ENST00000513562 TAL2Q16559 108 aa5.56□□□□□ -1.52
DDX41-216ENST00000513562 J3QQQ9 107 aa5.55□□□□□ -1.52
DDX41-216ENST00000513562 TCL1BO95988 128 aa5.55□□□□□ -1.52
DDX41-216ENST00000513562 ELOF1P60002 83 aaKnown RBP5.55□□□□□ -1.52
DDX41-216ENST00000513562 DEFB105AQ8NG35 78 aa5.55□□□□□ -1.52
DDX41-216ENST00000513562 LINC00846Q9NV44 126 aa5.55□□□□□ -1.52
DDX41-216ENST00000513562 NMUP48645 174 aa5.54□□□□□ -1.52
DDX41-216ENST00000513562 NPC2P61916 151 aa5.54□□□□□ -1.52
DDX41-216ENST00000513562 KRTAP6-3Q3LI67 103 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 201 ms