RNA–Protein interactions for RNA: ENST00000513448.5

PROM1-215, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 2,042 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-215ENST00000513448 CRYGAP11844 174 aa6.06□□□□□ -1.44
PROM1-215ENST00000513448 CXCL6P80162 114 aa6.06□□□□□ -1.44
PROM1-215ENST00000513448 C9orf153Q5TBE3 101 aa6.06□□□□□ -1.44
PROM1-215ENST00000513448 SERP2Q8N6R1 65 aa6.06□□□□□ -1.44
PROM1-215ENST00000513448 C7orf33Q8WU49 177 aa6.06□□□□□ -1.44
PROM1-215ENST00000513448 DHRS4-AS1Q9P1J3 65 aa6.06□□□□□ -1.44
PROM1-215ENST00000513448 SS18L2Q9UHA2 77 aa6.06□□□□□ -1.44
PROM1-215ENST00000513448 A0A1B0GW54 56 aa6.05□□□□□ -1.44
PROM1-215ENST00000513448 SERTAD4-AS1Q5TG53 156 aa6.05□□□□□ -1.44
PROM1-215ENST00000513448 Q6ZVQ6 151 aa6.05□□□□□ -1.44
PROM1-215ENST00000513448 IGLV1-50A0A075B6I6 118 aa6.04□□□□□ -1.44
PROM1-215ENST00000513448 A0A087WVE0 104 aa6.04□□□□□ -1.44
PROM1-215ENST00000513448 LOC107984640A0A0U1RRK4 108 aa6.04□□□□□ -1.44
PROM1-215ENST00000513448 SPRR1AP35321 89 aa6.04□□□□□ -1.44
PROM1-215ENST00000513448 LINC01547P58512 204 aaPredicted RBP6.04□□□□□ -1.44
PROM1-215ENST00000513448 Q6ZRX8 168 aa6.03□□□□□ -1.44
PROM1-215ENST00000513448 KRTAP4-16G5E9R7 235 aaPredicted RBP6.03□□□□□ -1.44
PROM1-215ENST00000513448 PRB2P02812 416 aaPredicted RBP6.03□□□□□ -1.44
PROM1-215ENST00000513448 BAHCC1Q9P281 2608 aa6.02□□□□□ -1.45
PROM1-215ENST00000513448 IGLV5-48A0A075B6I7 105 aa6.02□□□□□ -1.45
PROM1-215ENST00000513448 M0R2N4 97 aa6.02□□□□□ -1.45
PROM1-215ENST00000513448 SMIM20Q8N5G0 67 aa6.02□□□□□ -1.45
PROM1-215ENST00000513448 HAMPP81172 84 aa6.01□□□□□ -1.45
PROM1-215ENST00000513448 CASC10Q5T4H9 136 aa6.01□□□□□ -1.45
PROM1-215ENST00000513448 FAM19A1Q7Z5A9 133 aa6.01□□□□□ -1.45
PROM1-215ENST00000513448 ETDCA0A1B0GVM5 59 aa6.01□□□□□ -1.45
PROM1-215ENST00000513448 MRPL55Q7Z7F7 128 aaKnown RBP6.01□□□□□ -1.45
PROM1-215ENST00000513448 NOTCH1P46531 2555 aa6□□□□□ -1.45
PROM1-215ENST00000513448 CNBPP62633 177 aaKnown RBP6□□□□□ -1.45
PROM1-215ENST00000513448 Q8N377 158 aa6□□□□□ -1.45
PROM1-215ENST00000513448 COL6A5A8TX70 2615 aa6□□□□□ -1.45
PROM1-215ENST00000513448 C14orf177Q52M58 125 aa5.99□□□□□ -1.45
PROM1-215ENST00000513448 FAM168BA1KXE4 195 aa5.98□□□□□ -1.45
PROM1-215ENST00000513448 RPL37AP8A6NKH3 93 aa5.98□□□□□ -1.45
PROM1-215ENST00000513448 C16orf90A8MZG2 172 aa5.98□□□□□ -1.45
PROM1-215ENST00000513448 KRTAP7-1Q8IUC3 87 aa5.98□□□□□ -1.45
PROM1-215ENST00000513448 Q9BRP9 147 aa5.98□□□□□ -1.45
PROM1-215ENST00000513448 PKIGQ9Y2B9 76 aa5.98□□□□□ -1.45
PROM1-215ENST00000513448 NBEAL1Q6ZS30 2694 aa5.98□□□□□ -1.45
PROM1-215ENST00000513448 APLNQ9ULZ1 77 aa5.97□□□□□ -1.45
PROM1-215ENST00000513448 TRAV7A0A075B6U4 112 aa5.96□□□□□ -1.45
PROM1-215ENST00000513448 FUSP35637 526 aaKnown RBP eCLIP5.96□□□□□ -1.45
PROM1-215ENST00000513448 TNP2Q05952 138 aa5.96□□□□□ -1.45
PROM1-215ENST00000513448 NREPQ16612 68 aa5.96□□□□□ -1.45
PROM1-215ENST00000513448 REG3GQ6UW15 175 aa5.96□□□□□ -1.45
PROM1-215ENST00000513448 B9D2Q9BPU9 175 aa5.96□□□□□ -1.45
PROM1-215ENST00000513448 PSCAO43653 123 aa5.96□□□□□ -1.46
PROM1-215ENST00000513448 TMEM258P61165 79 aa5.96□□□□□ -1.46
PROM1-215ENST00000513448 FAM19A5Q7Z5A7 132 aaPredicted RBP5.96□□□□□ -1.46
PROM1-215ENST00000513448 DEFB105AQ8NG35 78 aa5.96□□□□□ -1.46
PROM1-215ENST00000513448 UBE2DNLQ8IWF7 75 aa5.95□□□□□ -1.46
PROM1-215ENST00000513448 DYNC2H1Q8NCM8 4307 aaKnown RBP5.95□□□□□ -1.46
PROM1-215ENST00000513448 DNAH9Q9NYC9 4486 aa5.94□□□□□ -1.46
PROM1-215ENST00000513448 KRTAP1-5Q9BYS1 174 aa5.94□□□□□ -1.46
PROM1-215ENST00000513448 RPS28P62857 69 aaKnown RBP5.93□□□□□ -1.46
PROM1-215ENST00000513448 UBE2BP63146 152 aa5.93□□□□□ -1.46
PROM1-215ENST00000513448 C1orf137Q5JT78 98 aa5.92□□□□□ -1.46
PROM1-215ENST00000513448 SPRR4Q96PI1 79 aa5.92□□□□□ -1.46
PROM1-215ENST00000513448 A0A096LNI7 61 aa5.92□□□□□ -1.46
PROM1-215ENST00000513448 Q8NBF4 154 aa5.92□□□□□ -1.46
PROM1-215ENST00000513448 NUPR2A6NF83 97 aa5.91□□□□□ -1.46
PROM1-215ENST00000513448 BPY2O14599 106 aa5.91□□□□□ -1.46
PROM1-215ENST00000513448 MGAM2Q2M2H8 2515 aa5.91□□□□□ -1.46
PROM1-215ENST00000513448 A0A1W2PNM2 257 aa5.9□□□□□ -1.47
PROM1-215ENST00000513448 H0Y9J4 135 aa5.9□□□□□ -1.47
PROM1-215ENST00000513448 KLKP1Q107X0 134 aa5.9□□□□□ -1.47
PROM1-215ENST00000513448 ST20-AS1Q8NBB2 130 aa5.9□□□□□ -1.47
PROM1-215ENST00000513448 LINC00474Q9P2X8 69 aa5.9□□□□□ -1.47
PROM1-215ENST00000513448 F8WEM9 126 aa5.89□□□□□ -1.47
PROM1-215ENST00000513448 C3orf84H3BNL1 204 aa5.89□□□□□ -1.47
PROM1-215ENST00000513448 ERC2-IT1O76042 136 aa5.89□□□□□ -1.47
PROM1-215ENST00000513448 C9orf163Q8N9P6 203 aa5.89□□□□□ -1.47
PROM1-215ENST00000513448 IGLV8-61A0A075B6I0 122 aa5.89□□□□□ -1.47
PROM1-215ENST00000513448 A0A1W2PNN7 141 aa5.89□□□□□ -1.47
PROM1-215ENST00000513448 J3KT08 172 aa5.89□□□□□ -1.47
PROM1-215ENST00000513448 IGKV4-1P06312 121 aa5.89□□□□□ -1.47
PROM1-215ENST00000513448 SCXQ7RTU7 201 aa5.89□□□□□ -1.47
PROM1-215ENST00000513448 SMIM29Q86T20 159 aa5.89□□□□□ -1.47
PROM1-215ENST00000513448 CYSTM1Q9H1C7 97 aa5.89□□□□□ -1.47
PROM1-215ENST00000513448 IGKV2-24A0A0C4DH68 120 aa5.88□□□□□ -1.47
PROM1-215ENST00000513448 NBDYA0A0U1RRE5 68 aa5.88□□□□□ -1.47
PROM1-215ENST00000513448 C20orf197Q8N268 126 aa5.88□□□□□ -1.47
PROM1-215ENST00000513448 LRCOL1A6NCL2 159 aa5.87□□□□□ -1.47
PROM1-215ENST00000513448 J3QL48 77 aa5.87□□□□□ -1.47
PROM1-215ENST00000513448 NDUFC1O43677 76 aa5.87□□□□□ -1.47
PROM1-215ENST00000513448 DNAH10Q8IVF4 4471 aa5.86□□□□□ -1.47
PROM1-215ENST00000513448 MDFIQ99750 246 aa5.86□□□□□ -1.47
PROM1-215ENST00000513448 STAB2Q8WWQ8 2551 aa5.86□□□□□ -1.47
PROM1-215ENST00000513448 SPRR1BP22528 89 aa5.86□□□□□ -1.47
PROM1-215ENST00000513448 DPH3Q96FX2 82 aa5.86□□□□□ -1.47
PROM1-215ENST00000513448 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.85□□□□□ -1.47
PROM1-215ENST00000513448 LINC00476Q8WZB0 136 aa5.85□□□□□ -1.47
PROM1-215ENST00000513448 LCE2AQ5TA79 106 aaPredicted RBP5.84□□□□□ -1.47
PROM1-215ENST00000513448 H7BZZ5 65 aa5.84□□□□□ -1.48
PROM1-215ENST00000513448 PRLHP81277 87 aa5.84□□□□□ -1.48
PROM1-215ENST00000513448 Q6ZRN7 208 aaPredicted RBP5.84□□□□□ -1.48
PROM1-215ENST00000513448 LYSTQ99698 3801 aa5.83□□□□□ -1.48
PROM1-215ENST00000513448 HIGD2AQ9BW72 106 aa5.83□□□□□ -1.48
PROM1-215ENST00000513448 OCR1Q9BZK8 76 aa5.83□□□□□ -1.48
PROM1-215ENST00000513448 COL7A1Q02388 2944 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms