RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 FN1P02751 2386 aaKnown RBP2.76□□□□□ -1.97
VCAN-209ENST00000513016 IGFL1Q6UW32 110 aa2.76□□□□□ -1.97
VCAN-209ENST00000513016 C9orf129Q5T035 196 aaKnown RBP2.75□□□□□ -1.97
VCAN-209ENST00000513016 A0A1W2PNN7 141 aa2.75□□□□□ -1.97
VCAN-209ENST00000513016 M0R2T5 61 aa2.75□□□□□ -1.97
VCAN-209ENST00000513016 PRR15Q8IV56 129 aa2.74□□□□□ -1.97
VCAN-209ENST00000513016 C2CD3Q4AC94 2353 aa2.74□□□□□ -1.97
VCAN-209ENST00000513016 MYO9AB2RTY4 2548 aa2.74□□□□□ -1.97
VCAN-209ENST00000513016 F8P00451 2351 aa2.74□□□□□ -1.97
VCAN-209ENST00000513016 SEC61BP60468 96 aaKnown RBP2.74□□□□□ -1.97
VCAN-209ENST00000513016 FAM218AQ96MZ4 157 aa2.74□□□□□ -1.97
VCAN-209ENST00000513016 KRTAP21-3Q3LHN1 58 aa2.74□□□□□ -1.97
VCAN-209ENST00000513016 FASNP49327 2511 aaKnown RBP2.73□□□□□ -1.97
VCAN-209ENST00000513016 USP9XQ93008 2570 aaPredicted RBP2.73□□□□□ -1.97
VCAN-209ENST00000513016 OXTP01178 125 aa2.73□□□□□ -1.97
VCAN-209ENST00000513016 PCSK5Q92824 1860 aa2.73□□□□□ -1.97
VCAN-209ENST00000513016 Q8N377 158 aa2.72□□□□□ -1.97
VCAN-209ENST00000513016 PLAC8Q9NZF1 115 aa2.72□□□□□ -1.97
VCAN-209ENST00000513016 MUC4Q99102 2169 aa2.72□□□□□ -1.97
VCAN-209ENST00000513016 C4orf26Q17RF5 130 aa2.72□□□□□ -1.97
VCAN-209ENST00000513016 ERC2-IT1O76042 136 aa2.72□□□□□ -1.97
VCAN-209ENST00000513016 LITAFQ99732 161 aa2.71□□□□□ -1.98
VCAN-209ENST00000513016 PRR26Q8N8Z3 221 aa2.71□□□□□ -1.98
VCAN-209ENST00000513016 K7EQZ3 153 aa2.71□□□□□ -1.98
VCAN-209ENST00000513016 ANKRD11Q6UB99 2663 aaPredicted RBP2.71□□□□□ -1.98
VCAN-209ENST00000513016 ANAPC11Q9NYG5 84 aa2.7□□□□□ -1.98
VCAN-209ENST00000513016 LINC01600Q96MT4 127 aa2.7□□□□□ -1.98
VCAN-209ENST00000513016 Q5VSD8 79 aa2.7□□□□□ -1.98
VCAN-209ENST00000513016 UQCR11O14957 56 aa2.7□□□□□ -1.98
VCAN-209ENST00000513016 CRIPTQ9P021 101 aa2.69□□□□□ -1.98
VCAN-209ENST00000513016 HRES1P13985 223 aa2.69□□□□□ -1.98
VCAN-209ENST00000513016 RYR1P21817 5038 aa2.69□□□□□ -1.98
VCAN-209ENST00000513016 GOLGB1Q14789 3259 aaKnown RBP2.69□□□□□ -1.98
VCAN-209ENST00000513016 PKD1L2Q7Z442 2459 aa2.68□□□□□ -1.98
VCAN-209ENST00000513016 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.68□□□□□ -1.98
VCAN-209ENST00000513016 MTORP42345 2549 aa2.68□□□□□ -1.98
VCAN-209ENST00000513016 A8MUN3 132 aa2.67□□□□□ -1.98
VCAN-209ENST00000513016 RPS28P62857 69 aaKnown RBP2.67□□□□□ -1.98
VCAN-209ENST00000513016 COA5Q86WW8 74 aa2.67□□□□□ -1.98
VCAN-209ENST00000513016 USP9YO00507 2555 aaPredicted RBP2.67□□□□□ -1.98
VCAN-209ENST00000513016 IGLV8-61A0A075B6I0 122 aa2.67□□□□□ -1.98
VCAN-209ENST00000513016 CYP4F30PQ9H0H9 118 aa2.67□□□□□ -1.98
VCAN-209ENST00000513016 FP248Q71RG6 208 aaPredicted RBP2.67□□□□□ -1.98
VCAN-209ENST00000513016 TLN2Q9Y4G6 2542 aa2.67□□□□□ -1.98
VCAN-209ENST00000513016 CSAG1Q6PB30 78 aa2.66□□□□□ -1.98
VCAN-209ENST00000513016 LINC01554Q52M75 96 aa2.66□□□□□ -1.98
VCAN-209ENST00000513016 UTRNP46939 3433 aa2.66□□□□□ -1.98
VCAN-209ENST00000513016 SMCPP49901 116 aaPredicted RBP2.66□□□□□ -1.98
VCAN-209ENST00000513016 FAM104AQ969W3 186 aa2.66□□□□□ -1.98
VCAN-209ENST00000513016 ANKRD17O75179 2603 aaKnown RBP2.66□□□□□ -1.98
VCAN-209ENST00000513016 IGLV5-48A0A075B6I7 105 aa2.66□□□□□ -1.98
VCAN-209ENST00000513016 CAMK2N1Q7Z7J9 78 aa2.65□□□□□ -1.98
VCAN-209ENST00000513016 SPTBN4Q9H254 2564 aa2.65□□□□□ -1.98
VCAN-209ENST00000513016 CEP295Q9C0D2 2601 aa2.65□□□□□ -1.99
VCAN-209ENST00000513016 PRO0461Q9UI25 63 aa2.65□□□□□ -1.99
VCAN-209ENST00000513016 A0A1W2PNM2 257 aa2.65□□□□□ -1.99
VCAN-209ENST00000513016 MIR22HGQ0VDD5 57 aa2.64□□□□□ -1.99
VCAN-209ENST00000513016 ZCCHC13Q8WW36 166 aaKnown RBP2.64□□□□□ -1.99
VCAN-209ENST00000513016 LCA10Q71F78 164 aa2.63□□□□□ -1.99
VCAN-209ENST00000513016 LUZP6Q538Z0 58 aa2.63□□□□□ -1.99
VCAN-209ENST00000513016 Q8N1X5 172 aa2.63□□□□□ -1.99
VCAN-209ENST00000513016 SPANXA2-OT1Q8N9U9 137 aa2.63□□□□□ -1.99
VCAN-209ENST00000513016 KRTAP10-1P60331 282 aa2.63□□□□□ -1.99
VCAN-209ENST00000513016 ACANP16112 2415 aa2.62□□□□□ -1.99
VCAN-209ENST00000513016 A0A0G2JQZ4 141 aa2.62□□□□□ -1.99
VCAN-209ENST00000513016 SPRR1BP22528 89 aa2.62□□□□□ -1.99
VCAN-209ENST00000513016 CDC42SE1Q9NRR8 79 aa2.62□□□□□ -1.99
VCAN-209ENST00000513016 S4R3F8 94 aa2.62□□□□□ -1.99
VCAN-209ENST00000513016 KTN1-AS1Q86SY8 53 aa2.62□□□□□ -1.99
VCAN-209ENST00000513016 POLQO75417 2590 aa2.62□□□□□ -1.99
VCAN-209ENST00000513016 PCNTO95613 3336 aa2.61□□□□□ -1.99
VCAN-209ENST00000513016 EPG5Q9HCE0 2579 aa2.61□□□□□ -1.99
VCAN-209ENST00000513016 LINC00483Q53H64 154 aa2.61□□□□□ -1.99
VCAN-209ENST00000513016 SPRR1AP35321 89 aa2.61□□□□□ -1.99
VCAN-209ENST00000513016 Q6ZR54 194 aa2.6□□□□□ -1.99
VCAN-209ENST00000513016 EIF4EBP3O60516 100 aaPredicted RBP2.6□□□□□ -1.99
VCAN-209ENST00000513016 A0A0D9SG42 100 aa2.59□□□□□ -1.99
VCAN-209ENST00000513016 KRTAP10-2P60368 255 aa2.59□□□□□ -1.99
VCAN-209ENST00000513016 KLKP1Q107X0 134 aa2.59□□□□□ -2
VCAN-209ENST00000513016 H3BS24 57 aa2.58□□□□□ -2
VCAN-209ENST00000513016 SPINK7P58062 85 aa2.58□□□□□ -2
VCAN-209ENST00000513016 FLNBO75369 2602 aaKnown RBP2.57□□□□□ -2
VCAN-209ENST00000513016 PLAC4Q8WY50 150 aa2.57□□□□□ -2
VCAN-209ENST00000513016 DMAC1Q96GE9 116 aa2.57□□□□□ -2
VCAN-209ENST00000513016 R4GN34 69 aa2.57□□□□□ -2
VCAN-209ENST00000513016 HECTD1Q9ULT8 2610 aa2.57□□□□□ -2
VCAN-209ENST00000513016 KRTAP1-5Q9BYS1 174 aa2.57□□□□□ -2
VCAN-209ENST00000513016 A0A1B0GU33 70 aa2.57□□□□□ -2
VCAN-209ENST00000513016 EP400Q96L91 3159 aa2.57□□□□□ -2
VCAN-209ENST00000513016 SETD2Q9BYW2 2564 aaPredicted RBP2.56□□□□□ -2
VCAN-209ENST00000513016 RPS29P62273 56 aaKnown RBP2.56□□□□□ -2
VCAN-209ENST00000513016 A0A0A0MQY5 61 aa2.55□□□□□ -2
VCAN-209ENST00000513016 MMP24-AS1A0A0U1RRL7 71 aa2.55□□□□□ -2
VCAN-209ENST00000513016 KRTAP26-1Q6PEX3 210 aa2.55□□□□□ -2
VCAN-209ENST00000513016 CR1P17927 2039 aa2.54□□□□□ -2
VCAN-209ENST00000513016 MGAM2Q2M2H8 2515 aa2.53□□□□□ -2
VCAN-209ENST00000513016 Q1T7F1 81 aa2.53□□□□□ -2
VCAN-209ENST00000513016 Q5W150 140 aa2.53□□□□□ -2
VCAN-209ENST00000513016 LINC00472Q9H8W2 130 aa2.53□□□□□ -2
VCAN-209ENST00000513016 CEP350Q5VT06 3117 aa2.53□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms