RNA–Protein interactions for RNA: ENST00000512643.1

PDS5A-209, Transcript of PDS5 cohesin associated factor A, humanhuman

TSL 4

Gene PDS5A, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-209ENST00000512643 SSBP3-AS1Q7Z2R9 100 aa2.72□□□□□ -1.97
PDS5A-209ENST00000512643 C6orf48Q9UBA6 75 aa2.72□□□□□ -1.97
PDS5A-209ENST00000512643 A0A0C4DFX4 3053 aa2.71□□□□□ -1.98
PDS5A-209ENST00000512643 A0A0G2JQZ4 141 aa2.71□□□□□ -1.98
PDS5A-209ENST00000512643 A0A1W2PNN7 141 aa2.71□□□□□ -1.98
PDS5A-209ENST00000512643 A8MTW9 85 aa2.71□□□□□ -1.98
PDS5A-209ENST00000512643 Q9Y3F1 56 aa2.71□□□□□ -1.98
PDS5A-209ENST00000512643 AHCTF1Q8WYP5 2266 aa2.71□□□□□ -1.98
PDS5A-209ENST00000512643 DOPEY2Q9Y3R5 2298 aa2.71□□□□□ -1.98
PDS5A-209ENST00000512643 ABCA1O95477 2261 aa2.69□□□□□ -1.98
PDS5A-209ENST00000512643 DEFB131AP59861 70 aa2.69□□□□□ -1.98
PDS5A-209ENST00000512643 KRTAP10-3P60369 221 aa2.69□□□□□ -1.98
PDS5A-209ENST00000512643 ALMS1Q8TCU4 4167 aa2.68□□□□□ -1.98
PDS5A-209ENST00000512643 NOTCH3Q9UM47 2321 aa2.68□□□□□ -1.98
PDS5A-209ENST00000512643 GVQW2A0A096LPI5 108 aaPredicted RBP2.68□□□□□ -1.98
PDS5A-209ENST00000512643 KRTAP10-5P60370 271 aa2.68□□□□□ -1.98
PDS5A-209ENST00000512643 PRO2289Q9P1D8 64 aa2.68□□□□□ -1.98
PDS5A-209ENST00000512643 ASXL3Q9C0F0 2248 aa2.68□□□□□ -1.98
PDS5A-209ENST00000512643 DEFB108BQ8NET1 73 aa2.66□□□□□ -1.98
PDS5A-209ENST00000512643 PSORS1C2Q9UIG4 136 aa2.66□□□□□ -1.98
PDS5A-209ENST00000512643 MMP24-AS1A0A0U1RRL7 71 aa2.65□□□□□ -1.99
PDS5A-209ENST00000512643 BRWD1Q9NSI6 2320 aa2.65□□□□□ -1.99
PDS5A-209ENST00000512643 TECTAO75443 2155 aa2.62□□□□□ -1.99
PDS5A-209ENST00000512643 DEFB1P60022 68 aa2.62□□□□□ -1.99
PDS5A-209ENST00000512643 DEFB105AQ8NG35 78 aa2.62□□□□□ -1.99
PDS5A-209ENST00000512643 MRPL34Q9BQ48 92 aaKnown RBP2.62□□□□□ -1.99
PDS5A-209ENST00000512643 RHPN1-AS1Q9BWJ2 59 aa2.62□□□□□ -1.99
PDS5A-209ENST00000512643 G3V318 75 aa2.61□□□□□ -1.99
PDS5A-209ENST00000512643 TPRXLQ17RH7 258 aa2.61□□□□□ -1.99
PDS5A-209ENST00000512643 LCE3EQ5T5B0 92 aa2.61□□□□□ -1.99
PDS5A-209ENST00000512643 CLPSL2Q6UWE3 100 aa2.61□□□□□ -1.99
PDS5A-209ENST00000512643 USMG5Q96IX5 58 aa2.61□□□□□ -1.99
PDS5A-209ENST00000512643 CNOT1A5YKK6 2376 aaKnown RBP2.61□□□□□ -1.99
PDS5A-209ENST00000512643 WNK2Q9Y3S1 2297 aa2.61□□□□□ -1.99
PDS5A-209ENST00000512643 ICE1Q9Y2F5 2266 aa2.6□□□□□ -1.99
PDS5A-209ENST00000512643 H3BUA1 57 aa2.6□□□□□ -1.99
PDS5A-209ENST00000512643 SPINK13Q1W4C9 94 aa2.6□□□□□ -1.99
PDS5A-209ENST00000512643 Q6ZRX8 168 aa2.6□□□□□ -1.99
PDS5A-209ENST00000512643 CRIPTQ9P021 101 aa2.6□□□□□ -1.99
PDS5A-209ENST00000512643 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.6□□□□□ -1.999e-7■□□□□ 10.5
PDS5A-209ENST00000512643 TRIOBPQ9H2D6 2365 aa2.59□□□□□ -1.99
PDS5A-209ENST00000512643 H0YAA0 97 aa2.59□□□□□ -1.99
PDS5A-209ENST00000512643 COX6B2Q6YFQ2 88 aa2.59□□□□□ -1.99
PDS5A-209ENST00000512643 R4GN34 69 aa2.59□□□□□ -1.99
PDS5A-209ENST00000512643 KRTAP10-7P60409 375 aaPredicted RBP2.58□□□□□ -2
PDS5A-209ENST00000512643 IGFL1Q6UW32 110 aa2.58□□□□□ -2
PDS5A-209ENST00000512643 PLAC4Q8WY50 150 aa2.58□□□□□ -2
PDS5A-209ENST00000512643 CACNA1BQ00975 2339 aa2.57□□□□□ -2
PDS5A-209ENST00000512643 KRTAP12-2P59991 146 aa2.57□□□□□ -2
PDS5A-209ENST00000512643 DEFB109BQ30KR1 87 aa2.57□□□□□ -2
PDS5A-209ENST00000512643 UNQ6190/PRO20217Q6UXQ8 127 aa2.57□□□□□ -2
PDS5A-209ENST00000512643 Q6ZSA8 131 aa2.57□□□□□ -2
PDS5A-209ENST00000512643 CACNA1EQ15878 2313 aa2.56□□□□□ -2
PDS5A-209ENST00000512643 TPRP12270 2363 aaKnown RBP2.56□□□□□ -2
PDS5A-209ENST00000512643 LY6EQ16553 131 aa2.56□□□□□ -2
PDS5A-209ENST00000512643 LCE1EQ5T753 118 aa2.56□□□□□ -2
PDS5A-209ENST00000512643 ZFHX2Q9C0A1 2572 aaPredicted RBP2.55□□□□□ -2
PDS5A-209ENST00000512643 WNK1Q9H4A3 2382 aa2.55□□□□□ -2
PDS5A-209ENST00000512643 SPTBN1Q01082 2364 aaKnown RBP2.54□□□□□ -2
PDS5A-209ENST00000512643 INE1O15225 51 aa2.54□□□□□ -2
PDS5A-209ENST00000512643 HTN1P15515 57 aa2.54□□□□□ -2
PDS5A-209ENST00000512643 SPRR1AP35321 89 aa2.54□□□□□ -2
PDS5A-209ENST00000512643 KRTAP13-3Q3SY46 172 aa2.54□□□□□ -2
PDS5A-209ENST00000512643 H1FX-AS1Q4G0G2 97 aa2.54□□□□□ -2
PDS5A-209ENST00000512643 KRTAP5-11Q6L8G4 156 aa2.54□□□□□ -2
PDS5A-209ENST00000512643 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.54□□□□□ -2
PDS5A-209ENST00000512643 SPACA4Q8TDM5 124 aa2.53□□□□□ -2
PDS5A-209ENST00000512643 KRTAP13-2Q52LG2 175 aa2.51□□□□□ -2.01
PDS5A-209ENST00000512643 H3BUX3 64 aa2.49□□□□□ -2.01
PDS5A-209ENST00000512643 DEFB130BP0DP73 79 aa2.49□□□□□ -2.01
PDS5A-209ENST00000512643 DEFB130AP0DP74 79 aa2.49□□□□□ -2.01
PDS5A-209ENST00000512643 SPRR1BP22528 89 aa2.49□□□□□ -2.01
PDS5A-209ENST00000512643 RPL37P61927 97 aaKnown RBP2.49□□□□□ -2.01
PDS5A-209ENST00000512643 COL6A6A6NMZ7 2263 aa2.48□□□□□ -2.01
PDS5A-209ENST00000512643 Q6ZRN7 208 aaPredicted RBP2.48□□□□□ -2.01
PDS5A-209ENST00000512643 IGF2RP11717 2491 aa2.48□□□□□ -2.01
PDS5A-209ENST00000512643 FLG2Q5D862 2391 aaPredicted RBP2.47□□□□□ -2.01
PDS5A-209ENST00000512643 DEFB133Q30KQ1 61 aa2.47□□□□□ -2.01
PDS5A-209ENST00000512643 C10orf99Q6UWK7 81 aa2.47□□□□□ -2.01
PDS5A-209ENST00000512643 DEFB119Q8N690 84 aa2.47□□□□□ -2.01
PDS5A-209ENST00000512643 LYNX1P0DP58 116 aa2.46□□□□□ -2.02
PDS5A-209ENST00000512643 MGAQ8IWI9 3026 aa2.45□□□□□ -2.02
PDS5A-209ENST00000512643 C10orf95Q9H7T3 257 aa2.45□□□□□ -2.02
PDS5A-209ENST00000512643 WDR87Q6ZQQ6 2873 aa2.44□□□□□ -2.02
PDS5A-209ENST00000512643 NOP10Q9NPE3 64 aaKnown RBP2.44□□□□□ -2.02
PDS5A-209ENST00000512643 CACNA1GO43497 2377 aa2.44□□□□□ -2.02
PDS5A-209ENST00000512643 UBE2DNLQ8IWF7 75 aa2.43□□□□□ -2.02
PDS5A-209ENST00000512643 ZDBF2Q9HCK1 2354 aa2.43□□□□□ -2.02
PDS5A-209ENST00000512643 K7EIL1 84 aa2.42□□□□□ -2.02
PDS5A-209ENST00000512643 PRLHP81277 87 aa2.42□□□□□ -2.02
PDS5A-209ENST00000512643 SPTBN2O15020 2390 aa2.41□□□□□ -2.02
PDS5A-209ENST00000512643 LELP1Q5T871 98 aa2.41□□□□□ -2.02
PDS5A-209ENST00000512643 PRO0255Q9UI72 69 aa2.41□□□□□ -2.02
PDS5A-209ENST00000512643 SPTA1P02549 2419 aa2.41□□□□□ -2.02
PDS5A-209ENST00000512643 PCNX1Q96RV3 2341 aa2.4□□□□□ -2.02
PDS5A-209ENST00000512643 DEFB123Q8N688 67 aa2.4□□□□□ -2.03
PDS5A-209ENST00000512643 ACACAQ13085 2346 aa2.39□□□□□ -2.03
PDS5A-209ENST00000512643 BRD3OSQ6XYD6 125 aa2.39□□□□□ -2.03
PDS5A-209ENST00000512643 SPRR5A0A1B0GTR4 108 aa2.38□□□□□ -2.03
PDS5A-209ENST00000512643 KRTAP9-6A8MVA2 160 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms