RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 KIAA1549Q9HCM3 1950 aa5.83□□□□□ -1.48
VCAN-208ENST00000512590 KIAA1549LQ6ZVL6 1849 aa5.83□□□□□ -1.48
VCAN-208ENST00000512590 SPRR4Q96PI1 79 aa5.82□□□□□ -1.48
VCAN-208ENST00000512590 MYO18BQ8IUG5 2567 aa5.82□□□□□ -1.48
VCAN-208ENST00000512590 MYO9AB2RTY4 2548 aa5.81□□□□□ -1.48
VCAN-208ENST00000512590 PRR15Q8IV56 129 aa5.81□□□□□ -1.48
VCAN-208ENST00000512590 LOC110117498A0A087WWA1 95 aa5.81□□□□□ -1.48
VCAN-208ENST00000512590 Q1T7F1 81 aa5.8□□□□□ -1.48
VCAN-208ENST00000512590 H7BZZ5 65 aa5.79□□□□□ -1.48
VCAN-208ENST00000512590 A0A0A0MQY5 61 aa5.79□□□□□ -1.48
VCAN-208ENST00000512590 ANKHD1Q8IWZ3 2542 aaKnown RBP5.78□□□□□ -1.48
VCAN-208ENST00000512590 CD164Q04900 197 aa5.78□□□□□ -1.48
VCAN-208ENST00000512590 KCNQ1DNQ9H478 68 aa5.78□□□□□ -1.48
VCAN-208ENST00000512590 F8P00451 2351 aa5.77□□□□□ -1.49
VCAN-208ENST00000512590 FN1P02751 2386 aaKnown RBP5.77□□□□□ -1.49
VCAN-208ENST00000512590 CYP4F30PQ9H0H9 118 aa5.77□□□□□ -1.49
VCAN-208ENST00000512590 LCE6AA0A183 80 aa5.77□□□□□ -1.49
VCAN-208ENST00000512590 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.76□□□□□ -1.49
VCAN-208ENST00000512590 A0A1W2PNN7 141 aa5.76□□□□□ -1.49
VCAN-208ENST00000512590 LRRK2Q5S007 2527 aa5.76□□□□□ -1.49
VCAN-208ENST00000512590 ARHGAP32A7KAX9 2087 aa5.75□□□□□ -1.49
VCAN-208ENST00000512590 CDH23Q9H251 3354 aa5.74□□□□□ -1.49
VCAN-208ENST00000512590 A0A1B0GU33 70 aa5.73□□□□□ -1.49
VCAN-208ENST00000512590 CEP192Q8TEP8 1941 aa5.73□□□□□ -1.49
VCAN-208ENST00000512590 A0A0G2JQZ4 141 aa5.73□□□□□ -1.49
VCAN-208ENST00000512590 C4orf26Q17RF5 130 aa5.73□□□□□ -1.49
VCAN-208ENST00000512590 M0QZ58 72 aa5.72□□□□□ -1.49
VCAN-208ENST00000512590 CNBPP62633 177 aaKnown RBP5.72□□□□□ -1.49
VCAN-208ENST00000512590 C2CD3Q4AC94 2353 aa5.71□□□□□ -1.49
VCAN-208ENST00000512590 PRO0628Q9UI54 55 aa5.71□□□□□ -1.5
VCAN-208ENST00000512590 PIEZO1Q92508 2521 aa5.71□□□□□ -1.5
VCAN-208ENST00000512590 C5orf42Q9H799 3197 aa5.71□□□□□ -1.5
VCAN-208ENST00000512590 UNC80Q8N2C7 3258 aa5.71□□□□□ -1.5
VCAN-208ENST00000512590 FAM229BQ4G0N7 80 aa5.7□□□□□ -1.5
VCAN-208ENST00000512590 MUC22E2RYF6 1773 aaPredicted RBP5.7□□□□□ -1.5
VCAN-208ENST00000512590 CRIP3Q6Q6R5 217 aa5.7□□□□□ -1.5
VCAN-208ENST00000512590 SPINK7P58062 85 aa5.7□□□□□ -1.5
VCAN-208ENST00000512590 KRTAP10-3P60369 221 aa5.7□□□□□ -1.5
VCAN-208ENST00000512590 XIRP2A4UGR9 3374 aa5.69□□□□□ -1.5
VCAN-208ENST00000512590 FAM218AQ96MZ4 157 aa5.69□□□□□ -1.5
VCAN-208ENST00000512590 COX8CQ7Z4L0 72 aa5.69□□□□□ -1.5
VCAN-208ENST00000512590 JMJD1CQ15652 2540 aa5.69□□□□□ -1.5
VCAN-208ENST00000512590 ZCCHC13Q8WW36 166 aaKnown RBP5.68□□□□□ -1.5
VCAN-208ENST00000512590 DMAC1Q96GE9 116 aa5.68□□□□□ -1.5
VCAN-208ENST00000512590 LINC01546A6NGU7 62 aa5.66□□□□□ -1.5
VCAN-208ENST00000512590 HCFC1P51610 2035 aa5.64□□□□□ -1.51
VCAN-208ENST00000512590 WIPF1O43516 503 aa5.63□□□□□ -1.51
VCAN-208ENST00000512590 Q8N377 158 aa5.63□□□□□ -1.51
VCAN-208ENST00000512590 ZNF462Q96JM2 2506 aa5.63□□□□□ -1.51
VCAN-208ENST00000512590 NCOR2Q9Y618 2525 aa5.62□□□□□ -1.51
VCAN-208ENST00000512590 RANBP2P49792 3224 aaKnown RBP5.61□□□□□ -1.51
VCAN-208ENST00000512590 PRR34Q9NV39 138 aa5.61□□□□□ -1.51
VCAN-208ENST00000512590 A0A1W2PNM2 257 aa5.61□□□□□ -1.51
VCAN-208ENST00000512590 LRP4O75096 1905 aa5.61□□□□□ -1.51
VCAN-208ENST00000512590 WDR87Q6ZQQ6 2873 aa5.6□□□□□ -1.51
VCAN-208ENST00000512590 VCANP13611 3396 aa5.59□□□□□ -1.51
VCAN-208ENST00000512590 TLN1Q9Y490 2541 aaKnown RBP5.59□□□□□ -1.51
VCAN-208ENST00000512590 EML5Q05BV3 1969 aa5.59□□□□□ -1.51
VCAN-208ENST00000512590 PRUNE2Q8WUY3 3088 aa5.59□□□□□ -1.51
VCAN-208ENST00000512590 FP248Q71RG6 208 aaPredicted RBP5.59□□□□□ -1.51
VCAN-208ENST00000512590 URB1-AS1Q96HZ7 61 aa5.58□□□□□ -1.52
VCAN-208ENST00000512590 ZFYVE26Q68DK2 2539 aa5.58□□□□□ -1.52
VCAN-208ENST00000512590 DNAH14Q0VDD8 3507 aa5.58□□□□□ -1.52
VCAN-208ENST00000512590 A0A0C4DFX4 3053 aa5.57□□□□□ -1.52
VCAN-208ENST00000512590 SZT2Q5T011 3432 aa5.57□□□□□ -1.52
VCAN-208ENST00000512590 USP34Q70CQ2 3546 aa5.57□□□□□ -1.52
VCAN-208ENST00000512590 PLAC8Q9NZF1 115 aa5.55□□□□□ -1.52
VCAN-208ENST00000512590 CPAMD8Q8IZJ3 1885 aa5.55□□□□□ -1.52
VCAN-208ENST00000512590 HTTP42858 3142 aa5.55□□□□□ -1.52
VCAN-208ENST00000512590 COL4A2P08572 1712 aa5.55□□□□□ -1.52
VCAN-208ENST00000512590 ADM2Q7Z4H4 148 aa5.55□□□□□ -1.52
VCAN-208ENST00000512590 SPEGQ15772 3267 aa5.54□□□□□ -1.52
VCAN-208ENST00000512590 KLKP1Q107X0 134 aa5.53□□□□□ -1.52
VCAN-208ENST00000512590 A0A096LNJ9 63 aa5.53□□□□□ -1.52
VCAN-208ENST00000512590 GIG44P09565 113 aaPredicted RBP5.52□□□□□ -1.53
VCAN-208ENST00000512590 C20orf166-AS1Q96NR2 134 aa5.51□□□□□ -1.53
VCAN-208ENST00000512590 ACANP16112 2415 aa5.5□□□□□ -1.53
VCAN-208ENST00000512590 EYSQ5T1H1 3165 aa5.49□□□□□ -1.53
VCAN-208ENST00000512590 P0C880 135 aa5.49□□□□□ -1.53
VCAN-208ENST00000512590 IGF2RP11717 2491 aa5.49□□□□□ -1.53
VCAN-208ENST00000512590 SPANXA2-OT1Q8N9U9 137 aa5.49□□□□□ -1.53
VCAN-208ENST00000512590 PTPRBP23467 1997 aa5.48□□□□□ -1.53
VCAN-208ENST00000512590 CHD8Q9HCK8 2581 aa5.48□□□□□ -1.53
VCAN-208ENST00000512590 MYO15AQ9UKN7 3530 aa5.48□□□□□ -1.53
VCAN-208ENST00000512590 KRTAP10-1P60331 282 aa5.48□□□□□ -1.53
VCAN-208ENST00000512590 COL27A1Q8IZC6 1860 aaPredicted RBP5.47□□□□□ -1.53
VCAN-208ENST00000512590 USP9XQ93008 2570 aaPredicted RBP5.46□□□□□ -1.54
VCAN-208ENST00000512590 RPL37P61927 97 aaKnown RBP5.45□□□□□ -1.54
VCAN-208ENST00000512590 ABCA12Q86UK0 2595 aa5.45□□□□□ -1.54
VCAN-208ENST00000512590 SPRR1BP22528 89 aa5.44□□□□□ -1.54
VCAN-208ENST00000512590 Q8N9P0 234 aaPredicted RBP5.44□□□□□ -1.54
VCAN-208ENST00000512590 TLN2Q9Y4G6 2542 aa5.43□□□□□ -1.54
VCAN-208ENST00000512590 PIEZO2Q9H5I5 2752 aa5.43□□□□□ -1.54
VCAN-208ENST00000512590 ROMO1P60602 79 aa5.42□□□□□ -1.54
VCAN-208ENST00000512590 KRTAP10-2P60368 255 aa5.41□□□□□ -1.54
VCAN-208ENST00000512590 A0A096LNT2 108 aa5.41□□□□□ -1.54
VCAN-208ENST00000512590 TRIOO75962 3097 aa5.4□□□□□ -1.54
VCAN-208ENST00000512590 CHD7Q9P2D1 2997 aa5.4□□□□□ -1.55
VCAN-208ENST00000512590 CELSR3Q9NYQ7 3312 aa5.39□□□□□ -1.55
VCAN-208ENST00000512590 LINC00310P59036 64 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms