RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 MTORP42345 2549 aa3.91□□□□□ -1.78
USP38-203ENST00000511739 GVQW2A0A096LPI5 108 aaPredicted RBP3.91□□□□□ -1.78
USP38-203ENST00000511739 Q8NAQ8 132 aa3.91□□□□□ -1.78
USP38-203ENST00000511739 OBSCN-AS1Q96MR7 158 aa3.91□□□□□ -1.78
USP38-203ENST00000511739 DNAH10OSP0CZ25 163 aa3.9□□□□□ -1.79
USP38-203ENST00000511739 DSCR10P59022 87 aa3.9□□□□□ -1.79
USP38-203ENST00000511739 C9orf129Q5T035 196 aaKnown RBP3.9□□□□□ -1.79
USP38-203ENST00000511739 TM2D3Q9BRN9 247 aa3.9□□□□□ -1.79
USP38-203ENST00000511739 C5orf42Q9H799 3197 aa3.89□□□□□ -1.79
USP38-203ENST00000511739 EYSQ5T1H1 3165 aa3.89□□□□□ -1.79
USP38-203ENST00000511739 A8MWP4 228 aa3.89□□□□□ -1.79
USP38-203ENST00000511739 POLQO75417 2590 aa3.89□□□□□ -1.79
USP38-203ENST00000511739 K7EIL1 84 aa3.88□□□□□ -1.79
USP38-203ENST00000511739 BAHCC1Q9P281 2608 aa3.88□□□□□ -1.79
USP38-203ENST00000511739 ZNF861PO60384 105 aa3.88□□□□□ -1.79
USP38-203ENST00000511739 UQCR11O14957 56 aa3.88□□□□□ -1.79
USP38-203ENST00000511739 TRBV7-4A0A0J9YYF1 115 aa3.87□□□□□ -1.79
USP38-203ENST00000511739 FAM168BA1KXE4 195 aa3.87□□□□□ -1.79
USP38-203ENST00000511739 Q6ZQT0 140 aa3.87□□□□□ -1.79
USP38-203ENST00000511739 K7EQZ3 153 aa3.87□□□□□ -1.79
USP38-203ENST00000511739 A0A087WTM6 91 aa3.87□□□□□ -1.79
USP38-203ENST00000511739 Q6ZSA8 131 aa3.87□□□□□ -1.79
USP38-203ENST00000511739 ANKRD17O75179 2603 aaKnown RBP3.86□□□□□ -1.79
USP38-203ENST00000511739 LINC00528Q8N1L1 170 aa3.86□□□□□ -1.79
USP38-203ENST00000511739 CFAP54Q96N23 3096 aa3.86□□□□□ -1.79
USP38-203ENST00000511739 IGLV5-48A0A075B6I7 105 aa3.85□□□□□ -1.79
USP38-203ENST00000511739 A0A096LNT2 108 aa3.85□□□□□ -1.79
USP38-203ENST00000511739 LOC110117498A0A087WWA1 95 aa3.85□□□□□ -1.79
USP38-203ENST00000511739 A0A0D9SG42 100 aa3.85□□□□□ -1.79
USP38-203ENST00000511739 CAMK2N1Q7Z7J9 78 aa3.84□□□□□ -1.79
USP38-203ENST00000511739 ZNF575Q86XF7 245 aa3.84□□□□□ -1.79
USP38-203ENST00000511739 C8orf17Q9NRJ1 99 aa3.84□□□□□ -1.79
USP38-203ENST00000511739 IGLV5-45A0A087WSX0 123 aa3.84□□□□□ -1.8
USP38-203ENST00000511739 CSNK1G2-AS1Q8NCQ2 148 aa3.84□□□□□ -1.8
USP38-203ENST00000511739 PRRC2CQ9Y520 2896 aaKnown RBP3.84□□□□□ -1.8
USP38-203ENST00000511739 IGLV1-50A0A075B6I6 118 aa3.84□□□□□ -1.8
USP38-203ENST00000511739 VPREB1P12018 145 aa3.84□□□□□ -1.8
USP38-203ENST00000511739 COA5Q86WW8 74 aa3.83□□□□□ -1.8
USP38-203ENST00000511739 LUZP6Q538Z0 58 aa3.83□□□□□ -1.8
USP38-203ENST00000511739 IGLV7-43P04211 117 aa3.83□□□□□ -1.8
USP38-203ENST00000511739 MIR22HGQ0VDD5 57 aa3.83□□□□□ -1.8
USP38-203ENST00000511739 FAM218AQ96MZ4 157 aa3.83□□□□□ -1.8
USP38-203ENST00000511739 KRTAP10-11P60412 298 aa3.83□□□□□ -1.8
USP38-203ENST00000511739 A0A1B0GVX0 72 aa3.82□□□□□ -1.8
USP38-203ENST00000511739 PRO0628Q9UI54 55 aa3.82□□□□□ -1.8
USP38-203ENST00000511739 WDFY4Q6ZS81 3184 aa3.82□□□□□ -1.8
USP38-203ENST00000511739 ANAPC11Q9NYG5 84 aa3.82□□□□□ -1.8
USP38-203ENST00000511739 XIRP2A4UGR9 3374 aa3.81□□□□□ -1.8
USP38-203ENST00000511739 IGLV7-46A0A075B6I9 117 aa3.81□□□□□ -1.8
USP38-203ENST00000511739 IGFL1Q6UW32 110 aa3.81□□□□□ -1.8
USP38-203ENST00000511739 C9orf163Q8N9P6 203 aa3.81□□□□□ -1.8
USP38-203ENST00000511739 CDC42SE1Q9NRR8 79 aa3.81□□□□□ -1.8
USP38-203ENST00000511739 KCNQ1DNQ9H478 68 aa3.8□□□□□ -1.8
USP38-203ENST00000511739 LINC00483Q53H64 154 aa3.8□□□□□ -1.8
USP38-203ENST00000511739 PRR15Q8IV56 129 aa3.8□□□□□ -1.8
USP38-203ENST00000511739 HECTD1Q9ULT8 2610 aa3.8□□□□□ -1.8
USP38-203ENST00000511739 C19orf73Q9NVV2 129 aa3.8□□□□□ -1.8
USP38-203ENST00000511739 PSORS1C2Q9UIG4 136 aa3.8□□□□□ -1.8
USP38-203ENST00000511739 Q8N1X5 172 aa3.79□□□□□ -1.8
USP38-203ENST00000511739 CYP4F30PQ9H0H9 118 aa3.78□□□□□ -1.8
USP38-203ENST00000511739 ZNF292O60281 2723 aa3.78□□□□□ -1.8
USP38-203ENST00000511739 A8MUN3 132 aa3.77□□□□□ -1.81
USP38-203ENST00000511739 C15orf56Q8N910 161 aa3.77□□□□□ -1.81
USP38-203ENST00000511739 FAM104AQ969W3 186 aa3.77□□□□□ -1.81
USP38-203ENST00000511739 C4orf26Q17RF5 130 aa3.76□□□□□ -1.81
USP38-203ENST00000511739 TRIOO75962 3097 aa3.76□□□□□ -1.81
USP38-203ENST00000511739 USP24Q9UPU5 2620 aa3.76□□□□□ -1.81
USP38-203ENST00000511739 MGAM2Q2M2H8 2515 aa3.76□□□□□ -1.81
USP38-203ENST00000511739 SPRR4Q96PI1 79 aa3.76□□□□□ -1.81
USP38-203ENST00000511739 LINC00612Q8N6U2 182 aa3.75□□□□□ -1.81
USP38-203ENST00000511739 PRO0461Q9UI25 63 aa3.75□□□□□ -1.81
USP38-203ENST00000511739 A0A0G2JQZ4 141 aa3.75□□□□□ -1.81
USP38-203ENST00000511739 A0A1W2PNN7 141 aa3.75□□□□□ -1.81
USP38-203ENST00000511739 KRTAP1-3Q8IUG1 177 aa3.74□□□□□ -1.81
USP38-203ENST00000511739 HRES1P13985 223 aa3.74□□□□□ -1.81
USP38-203ENST00000511739 TNP2Q05952 138 aa3.74□□□□□ -1.81
USP38-203ENST00000511739 PRR34Q9NV39 138 aa3.74□□□□□ -1.81
USP38-203ENST00000511739 SPTBN5Q9NRC6 3674 aaKnown RBP3.74□□□□□ -1.81
USP38-203ENST00000511739 ERC2-IT1O76042 136 aa3.74□□□□□ -1.81
USP38-203ENST00000511739 TLX1NBP0CAT3 122 aa3.74□□□□□ -1.81
USP38-203ENST00000511739 Q8N377 158 aa3.74□□□□□ -1.81
USP38-203ENST00000511739 PRR26Q8N8Z3 221 aa3.73□□□□□ -1.81
USP38-203ENST00000511739 LITAFQ99732 161 aa3.73□□□□□ -1.81
USP38-203ENST00000511739 PLA2G2DQ9UNK4 145 aa3.73□□□□□ -1.81
USP38-203ENST00000511739 FLG2Q5D862 2391 aaPredicted RBP3.73□□□□□ -1.81
USP38-203ENST00000511739 RPS28P62857 69 aaKnown RBP3.73□□□□□ -1.81
USP38-203ENST00000511739 VPS13AQ96RL7 3174 aa3.73□□□□□ -1.81
USP38-203ENST00000511739 HELZ2Q9BYK8 2649 aaKnown RBP3.72□□□□□ -1.81
USP38-203ENST00000511739 MUC3AQ02505 3323 aa3.72□□□□□ -1.81
USP38-203ENST00000511739 SMCPP49901 116 aaPredicted RBP3.72□□□□□ -1.81
USP38-203ENST00000511739 CNBPP62633 177 aaKnown RBP3.72□□□□□ -1.81
USP38-203ENST00000511739 CASC10Q5T4H9 136 aa3.72□□□□□ -1.81
USP38-203ENST00000511739 CHD6Q8TD26 2715 aa3.72□□□□□ -1.81
USP38-203ENST00000511739 CSAG1Q6PB30 78 aa3.71□□□□□ -1.81
USP38-203ENST00000511739 KRTAP10-3P60369 221 aa3.71□□□□□ -1.82
USP38-203ENST00000511739 GIG44P09565 113 aaPredicted RBP3.71□□□□□ -1.82
USP38-203ENST00000511739 SEC61BP60468 96 aaKnown RBP3.7□□□□□ -1.82
USP38-203ENST00000511739 CD164Q04900 197 aa3.7□□□□□ -1.82
USP38-203ENST00000511739 KRTAP1-1Q07627 177 aa3.7□□□□□ -1.82
USP38-203ENST00000511739 Q1T7F1 81 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 321.5 ms