RNA–Protein interactions for RNA: ENST00000511105.1

PTPN13-208, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 3

Gene PTPN13, Length 645 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-208ENST00000511105 ZNF625Q96I27 306 aaPredicted RBP2.79□□□□□ -1.96
PTPN13-208ENST00000511105 AMELXQ99217 191 aa2.79□□□□□ -1.96
PTPN13-208ENST00000511105 TRAPPC1Q9Y5R8 145 aa2.79□□□□□ -1.96
PTPN13-208ENST00000511105 TNXBP22105 4242 aa2.79□□□□□ -1.96
PTPN13-208ENST00000511105 DMBT1Q9UGM3 2413 aaPredicted RBP2.78□□□□□ -1.96
PTPN13-208ENST00000511105 CKS1BP61024 79 aa2.78□□□□□ -1.96
PTPN13-208ENST00000511105 UBE2BP63146 152 aa2.78□□□□□ -1.96
PTPN13-208ENST00000511105 FA2HQ7L5A8 372 aa2.78□□□□□ -1.96
PTPN13-208ENST00000511105 OR10D4PQ8NGN7 298 aa2.78□□□□□ -1.96
PTPN13-208ENST00000511105 TOMM6Q96B49 74 aa2.78□□□□□ -1.96
PTPN13-208ENST00000511105 C2orf88Q9BSF0 95 aa2.78□□□□□ -1.96
PTPN13-208ENST00000511105 SEC11CQ9BY50 192 aa2.78□□□□□ -1.96
PTPN13-208ENST00000511105 LUZP6Q538Z0 58 aa2.77□□□□□ -1.97
PTPN13-208ENST00000511105 COX7B2Q8TF08 81 aa2.77□□□□□ -1.97
PTPN13-208ENST00000511105 LINC01600Q96MT4 127 aa2.77□□□□□ -1.97
PTPN13-208ENST00000511105 GNB1LQ9BYB4 327 aa2.77□□□□□ -1.97
PTPN13-208ENST00000511105 CST9LQ9H4G1 147 aa2.77□□□□□ -1.97
PTPN13-208ENST00000511105 NXT2Q9NPJ8 142 aaKnown RBP2.77□□□□□ -1.97
PTPN13-208ENST00000511105 SMCO4Q9NRQ5 59 aa2.77□□□□□ -1.97
PTPN13-208ENST00000511105 MRPL35Q9NZE8 188 aaKnown RBP2.77□□□□□ -1.97
PTPN13-208ENST00000511105 C22orf24Q9Y442 160 aa2.77□□□□□ -1.97
PTPN13-208ENST00000511105 A8MU10 97 aa2.76□□□□□ -1.97
PTPN13-208ENST00000511105 IGLV7-43P04211 117 aa2.76□□□□□ -1.97
PTPN13-208ENST00000511105 LINC00614P0C842 121 aa2.76□□□□□ -1.97
PTPN13-208ENST00000511105 SCGB1C2P0DMR2 95 aa2.76□□□□□ -1.97
PTPN13-208ENST00000511105 KRTAP10-8P60410 259 aa2.76□□□□□ -1.97
PTPN13-208ENST00000511105 C10orf91Q5T1B1 145 aa2.76□□□□□ -1.97
PTPN13-208ENST00000511105 SPINK6Q6UWN8 80 aa2.76□□□□□ -1.97
PTPN13-208ENST00000511105 FAM19A2Q8N3H0 131 aa2.76□□□□□ -1.97
PTPN13-208ENST00000511105 ANAPC13Q9BS18 74 aa2.76□□□□□ -1.97
PTPN13-208ENST00000511105 LINC00474Q9P2X8 69 aa2.76□□□□□ -1.97
PTPN13-208ENST00000511105 LAMTOR2Q9Y2Q5 125 aa2.76□□□□□ -1.97
PTPN13-208ENST00000511105 LPAP08519 4548 aa2.76□□□□□ -1.97
PTPN13-208ENST00000511105 MP68P56378 58 aa2.75□□□□□ -1.97
PTPN13-208ENST00000511105 FAM19A3Q7Z5A8 133 aa2.75□□□□□ -1.97
PTPN13-208ENST00000511105 BAGE3Q86Y29 109 aa2.75□□□□□ -1.97
PTPN13-208ENST00000511105 C18orf32Q8TCD1 76 aa2.75□□□□□ -1.97
PTPN13-208ENST00000511105 LINC00167Q96N53 147 aa2.75□□□□□ -1.97
PTPN13-208ENST00000511105 CARHSP1Q9Y2V2 147 aaKnown RBP2.75□□□□□ -1.97
PTPN13-208ENST00000511105 ZNF706Q9Y5V0 76 aaPredicted RBP2.75□□□□□ -1.97
PTPN13-208ENST00000511105 LRP2P98164 4655 aa2.75□□□□□ -1.97
PTPN13-208ENST00000511105 IGKV2-28A0A075B6P5 120 aa2.74□□□□□ -1.97
PTPN13-208ENST00000511105 TRBV30A0A0K0K1B3 111 aa2.74□□□□□ -1.97
PTPN13-208ENST00000511105 NUPR1O60356 82 aa2.74□□□□□ -1.97
PTPN13-208ENST00000511105 IGKV2D-28P01615 120 aa2.74□□□□□ -1.97
PTPN13-208ENST00000511105 HERVK_113P63121 156 aa2.74□□□□□ -1.97
PTPN13-208ENST00000511105 TMEM170BQ5T4T1 132 aa2.74□□□□□ -1.97
PTPN13-208ENST00000511105 Q8IZM0 81 aa2.74□□□□□ -1.97
PTPN13-208ENST00000511105 PMCHL2Q9BQD1 86 aa2.74□□□□□ -1.97
PTPN13-208ENST00000511105 RNF213Q63HN8 5207 aa2.74□□□□□ -1.97
PTPN13-208ENST00000511105 TRAV9-1A0A075B6T8 112 aa2.73□□□□□ -1.97
PTPN13-208ENST00000511105 C11orf86A6NJI1 115 aa2.73□□□□□ -1.97
PTPN13-208ENST00000511105 F8VRH5 84 aa2.73□□□□□ -1.97
PTPN13-208ENST00000511105 FABP4P15090 132 aa2.73□□□□□ -1.97
PTPN13-208ENST00000511105 ZNF22P17026 224 aaPredicted RBP2.73□□□□□ -1.97
PTPN13-208ENST00000511105 RHEBQ15382 184 aa2.73□□□□□ -1.97
PTPN13-208ENST00000511105 Q8NDZ9 215 aa2.73□□□□□ -1.97
PTPN13-208ENST00000511105 LINC01546A6NGU7 62 aa2.72□□□□□ -1.97
PTPN13-208ENST00000511105 TMEM238C9JI98 176 aa2.72□□□□□ -1.97
PTPN13-208ENST00000511105 HBDP02042 147 aa2.72□□□□□ -1.97
PTPN13-208ENST00000511105 TRGC2P03986 189 aa2.72□□□□□ -1.97
PTPN13-208ENST00000511105 LINC00158P58513 81 aa2.72□□□□□ -1.97
PTPN13-208ENST00000511105 SEC11AP67812 179 aa2.72□□□□□ -1.97
PTPN13-208ENST00000511105 MIR7-3HGQ8N6C7 128 aa2.72□□□□□ -1.97
PTPN13-208ENST00000511105 DIRC1Q969H9 104 aa2.72□□□□□ -1.97
PTPN13-208ENST00000511105 PKIGQ9Y2B9 76 aa2.72□□□□□ -1.97
PTPN13-208ENST00000511105 H3BRM9 83 aa2.71□□□□□ -1.98
PTPN13-208ENST00000511105 K7EMI3 77 aa2.71□□□□□ -1.98
PTPN13-208ENST00000511105 SMIM13P0DJ93 91 aa2.71□□□□□ -1.98
PTPN13-208ENST00000511105 IGLC3P0DOY3 106 aa2.71□□□□□ -1.98
PTPN13-208ENST00000511105 G0S2P27469 103 aa2.71□□□□□ -1.98
PTPN13-208ENST00000511105 NPC2P61916 151 aa2.71□□□□□ -1.98
PTPN13-208ENST00000511105 NDUFA5Q16718 116 aa2.71□□□□□ -1.98
PTPN13-208ENST00000511105 SVBPQ8N300 66 aa2.71□□□□□ -1.98
PTPN13-208ENST00000511105 DAND5Q8N907 189 aa2.71□□□□□ -1.98
PTPN13-208ENST00000511105 Q8N9L7 120 aa2.71□□□□□ -1.98
PTPN13-208ENST00000511105 NCR3O14931 201 aa2.7□□□□□ -1.98
PTPN13-208ENST00000511105 PRLHP81277 87 aa2.7□□□□□ -1.98
PTPN13-208ENST00000511105 IFI27L1Q96BM0 104 aa2.7□□□□□ -1.98
PTPN13-208ENST00000511105 RETNLBQ9BQ08 111 aa2.7□□□□□ -1.98
PTPN13-208ENST00000511105 ERG28Q9UKR5 140 aa2.7□□□□□ -1.98
PTPN13-208ENST00000511105 COLCA2A8K830 154 aa2.69□□□□□ -1.98
PTPN13-208ENST00000511105 MEIG1Q5JSS6 88 aa2.69□□□□□ -1.98
PTPN13-208ENST00000511105 SCGB1D4Q6XE38 83 aa2.69□□□□□ -1.98
PTPN13-208ENST00000511105 ST20-AS1Q8NBB2 130 aa2.69□□□□□ -1.98
PTPN13-208ENST00000511105 BCE1O60756 84 aa2.68□□□□□ -1.98
PTPN13-208ENST00000511105 LEPROTL1O95214 131 aa2.68□□□□□ -1.98
PTPN13-208ENST00000511105 TSPEAR-AS2P59090 65 aa2.68□□□□□ -1.98
PTPN13-208ENST00000511105 KRTAP13-2Q52LG2 175 aa2.68□□□□□ -1.98
PTPN13-208ENST00000511105 C3orf22Q8N5N4 141 aa2.68□□□□□ -1.98
PTPN13-208ENST00000511105 CHCHD1Q96BP2 118 aaKnown RBP2.68□□□□□ -1.98
PTPN13-208ENST00000511105 M0R378 163 aa2.67□□□□□ -1.98
PTPN13-208ENST00000511105 RPL28P46779 137 aaKnown RBP2.67□□□□□ -1.98
PTPN13-208ENST00000511105 KRTAP12-2P59991 146 aa2.67□□□□□ -1.98
PTPN13-208ENST00000511105 HIGD2AQ9BW72 106 aa2.67□□□□□ -1.98
PTPN13-208ENST00000511105 TMEM126AQ9H061 195 aa2.67□□□□□ -1.98
PTPN13-208ENST00000511105 TRAV12-1A0A0B4J245 112 aa2.66□□□□□ -1.98
PTPN13-208ENST00000511105 LINC01549A6NIU2 74 aa2.66□□□□□ -1.98
PTPN13-208ENST00000511105 DDTP30046 118 aa2.66□□□□□ -1.98
PTPN13-208ENST00000511105 LINC00483Q53H64 154 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms