RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 HSPB8Q9UJY1 196 aa5.1□□□□□ -1.59
PDPN-209ENST00000510906 TRAV12-1A0A0B4J245 112 aa5.09□□□□□ -1.59
PDPN-209ENST00000510906 TMEM223A0PJW6 202 aa5.09□□□□□ -1.59
PDPN-209ENST00000510906 RPL13AP40429 203 aaKnown RBP5.09□□□□□ -1.59
PDPN-209ENST00000510906 COX17Q14061 63 aa5.09□□□□□ -1.59
PDPN-209ENST00000510906 KRTAP13-1Q8IUC0 172 aa5.09□□□□□ -1.59
PDPN-209ENST00000510906 LPAP08519 4548 aa5.08□□□□□ -1.6
PDPN-209ENST00000510906 A0A087X002 238 aa5.08□□□□□ -1.6
PDPN-209ENST00000510906 A0A0U1RRA0 63 aa5.08□□□□□ -1.6
PDPN-209ENST00000510906 LEPROTL1O95214 131 aa5.08□□□□□ -1.6
PDPN-209ENST00000510906 C3orf79P0CE67 100 aa5.08□□□□□ -1.6
PDPN-209ENST00000510906 UBE2AP49459 152 aa5.08□□□□□ -1.6
PDPN-209ENST00000510906 LINC01547P58512 204 aaPredicted RBP5.08□□□□□ -1.6
PDPN-209ENST00000510906 MAP1LC3CQ9BXW4 147 aa5.08□□□□□ -1.6
PDPN-209ENST00000510906 PRO1933Q9H354 126 aa5.08□□□□□ -1.6
PDPN-209ENST00000510906 ANAPC11Q9NYG5 84 aa5.08□□□□□ -1.6
PDPN-209ENST00000510906 TMEM238C9JI98 176 aa5.07□□□□□ -1.6
PDPN-209ENST00000510906 LINC00158P58513 81 aa5.07□□□□□ -1.6
PDPN-209ENST00000510906 LCE1AQ5T7P2 110 aa5.07□□□□□ -1.6
PDPN-209ENST00000510906 SFTA2Q6UW10 78 aa5.07□□□□□ -1.6
PDPN-209ENST00000510906 H0Y8G0 127 aa5.06□□□□□ -1.6
PDPN-209ENST00000510906 PRLHP81277 87 aa5.06□□□□□ -1.6
PDPN-209ENST00000510906 MIEN1Q9BRT3 115 aa5.06□□□□□ -1.6
PDPN-209ENST00000510906 TMEM126AQ9H061 195 aa5.06□□□□□ -1.6
PDPN-209ENST00000510906 SYS1-DBNDD2H3BUS1 97 aa5.05□□□□□ -1.6
PDPN-209ENST00000510906 M0R378 163 aa5.05□□□□□ -1.6
PDPN-209ENST00000510906 TSPAN13O95857 204 aa5.05□□□□□ -1.6
PDPN-209ENST00000510906 SMIM13P0DJ93 91 aa5.05□□□□□ -1.6
PDPN-209ENST00000510906 CRYGAP11844 174 aa5.05□□□□□ -1.6
PDPN-209ENST00000510906 FAM19A1Q7Z5A9 133 aa5.05□□□□□ -1.6
PDPN-209ENST00000510906 C14orf144Q96I85 54 aa5.05□□□□□ -1.6
PDPN-209ENST00000510906 HSBP1L1C9JCN9 74 aa5.04□□□□□ -1.6
PDPN-209ENST00000510906 PRR4Q16378 134 aa5.04□□□□□ -1.6
PDPN-209ENST00000510906 KRTAP13-2Q52LG2 175 aa5.04□□□□□ -1.6
PDPN-209ENST00000510906 SPATA45Q537H7 98 aa5.04□□□□□ -1.6
PDPN-209ENST00000510906 MEIG1Q5JSS6 88 aa5.04□□□□□ -1.6
PDPN-209ENST00000510906 TYMSOSQ8TAI1 123 aa5.04□□□□□ -1.6
PDPN-209ENST00000510906 UQCR10Q9UDW1 63 aa5.04□□□□□ -1.6
PDPN-209ENST00000510906 M0R143 59 aa5.03□□□□□ -1.6
PDPN-209ENST00000510906 TSPEAR-AS2P59090 65 aa5.03□□□□□ -1.6
PDPN-209ENST00000510906 HERV-K104P63124 156 aa5.03□□□□□ -1.6
PDPN-209ENST00000510906 LINC01545Q5VT33 79 aa5.03□□□□□ -1.6
PDPN-209ENST00000510906 BOD1L2Q8IYS8 172 aa5.03□□□□□ -1.6
PDPN-209ENST00000510906 MIR7-3HGQ8N6C7 128 aa5.03□□□□□ -1.6
PDPN-209ENST00000510906 PMCHL2Q9BQD1 86 aa5.03□□□□□ -1.6
PDPN-209ENST00000510906 NDUFA12Q9UI09 145 aa5.03□□□□□ -1.6
PDPN-209ENST00000510906 NCR3O14931 201 aa5.02□□□□□ -1.61
PDPN-209ENST00000510906 FAM229BQ4G0N7 80 aa5.02□□□□□ -1.61
PDPN-209ENST00000510906 MYMXA0A1B0GTQ4 84 aa5.01□□□□□ -1.61
PDPN-209ENST00000510906 PLEKHB2Q96CS7 222 aa5.01□□□□□ -1.61
PDPN-209ENST00000510906 PRAC1Q96KF2 57 aa5.01□□□□□ -1.61
PDPN-209ENST00000510906 HIGD2AQ9BW72 106 aa5.01□□□□□ -1.61
PDPN-209ENST00000510906 LEPROTO15243 131 aa5□□□□□ -1.61
PDPN-209ENST00000510906 DPM2O94777 84 aa5□□□□□ -1.61
PDPN-209ENST00000510906 PLNP26678 52 aa5□□□□□ -1.61
PDPN-209ENST00000510906 DAND5Q8N907 189 aa5□□□□□ -1.61
PDPN-209ENST00000510906 IGKV2D-26A0A0A0MRZ7 120 aa4.99□□□□□ -1.61
PDPN-209ENST00000510906 J3QQQ9 107 aa4.99□□□□□ -1.61
PDPN-209ENST00000510906 IGKCP01834 107 aa4.99□□□□□ -1.61
PDPN-209ENST00000510906 C3orf22Q8N5N4 141 aa4.99□□□□□ -1.61
PDPN-209ENST00000510906 LINC00304Q8N9R0 145 aa4.99□□□□□ -1.61
PDPN-209ENST00000510906 TRBV10-3A0A0K0K1G6 114 aa4.98□□□□□ -1.61
PDPN-209ENST00000510906 SPRR1AP35321 89 aa4.98□□□□□ -1.61
PDPN-209ENST00000510906 HERVK_113P61574 105 aa4.98□□□□□ -1.61
PDPN-209ENST00000510906 SLC25A34Q6PIV7 304 aa4.98□□□□□ -1.61
PDPN-209ENST00000510906 ATOH7Q8N100 152 aa4.98□□□□□ -1.61
PDPN-209ENST00000510906 FAM218AQ96MZ4 157 aa4.98□□□□□ -1.61
PDPN-209ENST00000510906 SPRR4Q96PI1 79 aa4.98□□□□□ -1.61
PDPN-209ENST00000510906 SNHG12Q9BXW3 62 aa4.98□□□□□ -1.61
PDPN-209ENST00000510906 KCNQ1DNQ9H478 68 aa4.98□□□□□ -1.61
PDPN-209ENST00000510906 KRTAP4-16G5E9R7 235 aaPredicted RBP4.97□□□□□ -1.61
PDPN-209ENST00000510906 LGALS3P17931 250 aaKnown RBP4.97□□□□□ -1.61
PDPN-209ENST00000510906 COL5A1-AS1Q5SY13 56 aa4.97□□□□□ -1.61
PDPN-209ENST00000510906 LINC00337Q8N6G1 96 aa4.97□□□□□ -1.61
PDPN-209ENST00000510906 RETNLBQ9BQ08 111 aa4.97□□□□□ -1.61
PDPN-209ENST00000510906 LOC107984156A0A0G2JMH3 177 aa4.96□□□□□ -1.62
PDPN-209ENST00000510906 ETDCA0A1B0GVM5 59 aa4.96□□□□□ -1.62
PDPN-209ENST00000510906 DLEU1O43261 78 aa4.96□□□□□ -1.62
PDPN-209ENST00000510906 COX8AP10176 69 aa4.96□□□□□ -1.62
PDPN-209ENST00000510906 NMUP48645 174 aa4.96□□□□□ -1.62
PDPN-209ENST00000510906 NOTCH2NLQ7Z3S9 236 aa4.96□□□□□ -1.62
PDPN-209ENST00000510906 ARL17AQ8IVW1 177 aa4.96□□□□□ -1.62
PDPN-209ENST00000510906 SMCR5Q8TEV8 140 aa4.96□□□□□ -1.62
PDPN-209ENST00000510906 PPDPFQ9H3Y8 114 aa4.95□□□□□ -1.62
PDPN-209ENST00000510906 A0A0J9YXY3 114 aa4.94□□□□□ -1.62
PDPN-209ENST00000510906 TRBV10-2A0A0K0K1G8 114 aa4.94□□□□□ -1.62
PDPN-209ENST00000510906 E9PLD3 99 aa4.94□□□□□ -1.62
PDPN-209ENST00000510906 NPC2P61916 151 aa4.94□□□□□ -1.62
PDPN-209ENST00000510906 ADAMTSL4-AS1Q5T5F5 129 aa4.94□□□□□ -1.62
PDPN-209ENST00000510906 SOSTDC1Q6X4U4 206 aa4.94□□□□□ -1.62
PDPN-209ENST00000510906 SPANXB1Q9NS25 103 aaPredicted RBP4.94□□□□□ -1.62
PDPN-209ENST00000510906 ZNF706Q9Y5V0 76 aaPredicted RBP4.94□□□□□ -1.62
PDPN-209ENST00000510906 A0A1B0GV90 55 aa4.93□□□□□ -1.62
PDPN-209ENST00000510906 ERC2-IT1O76042 136 aa4.93□□□□□ -1.62
PDPN-209ENST00000510906 LITAFQ99732 161 aa4.93□□□□□ -1.62
PDPN-209ENST00000510906 NDUFC2O95298 119 aa4.92□□□□□ -1.62
PDPN-209ENST00000510906 IGLV6-57P01721 117 aa4.92□□□□□ -1.62
PDPN-209ENST00000510906 BATFQ16520 125 aa4.92□□□□□ -1.62
PDPN-209ENST00000510906 Q9BRP9 147 aa4.92□□□□□ -1.62
PDPN-209ENST00000510906 IGLV7-46A0A075B6I9 117 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms