RNA–Protein interactions for RNA: ENST00000509712.5

CCDC30-213, Transcript of coiled-coil domain containing 30, humanhuman

TSL 2

Gene CCDC30, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-213ENST00000509712 DEFB108BQ8NET1 73 aa2.93□□□□□ -1.94
CCDC30-213ENST00000509712 CCL19Q99731 98 aa2.93□□□□□ -1.94
CCDC30-213ENST00000509712 ANAPC11Q9NYG5 84 aa2.93□□□□□ -1.94
CCDC30-213ENST00000509712 LINC00304Q8N9R0 145 aa2.92□□□□□ -1.94
CCDC30-213ENST00000509712 A8MTW9 85 aa2.91□□□□□ -1.94
CCDC30-213ENST00000509712 KRTAP10-12P60413 245 aa2.91□□□□□ -1.94
CCDC30-213ENST00000509712 PCOTHQ58A44 107 aa2.91□□□□□ -1.94
CCDC30-213ENST00000509712 C6orf48Q9UBA6 75 aa2.91□□□□□ -1.94
CCDC30-213ENST00000509712 H3BUA1 57 aa2.91□□□□□ -1.94
CCDC30-213ENST00000509712 DEFB131AP59861 70 aa2.91□□□□□ -1.94
CCDC30-213ENST00000509712 Q96NJ1 140 aa2.91□□□□□ -1.94
CCDC30-213ENST00000509712 ICE1Q9Y2F5 2266 aa2.9□□□□□ -1.95
CCDC30-213ENST00000509712 KRTAP11-1Q8IUC1 163 aa2.9□□□□□ -1.95
CCDC30-213ENST00000509712 USMG5Q96IX5 58 aa2.9□□□□□ -1.95
CCDC30-213ENST00000509712 AHCTF1Q8WYP5 2266 aa2.89□□□□□ -1.95
CCDC30-213ENST00000509712 NBDYA0A0U1RRE5 68 aa2.89□□□□□ -1.95
CCDC30-213ENST00000509712 DEFB116Q30KQ4 102 aa2.89□□□□□ -1.95
CCDC30-213ENST00000509712 RHPN1-AS1Q9BWJ2 59 aa2.89□□□□□ -1.95
CCDC30-213ENST00000509712 A0A1B0GU33 70 aa2.88□□□□□ -1.95
CCDC30-213ENST00000509712 LY6G6CO95867 125 aa2.88□□□□□ -1.95
CCDC30-213ENST00000509712 TECTAO75443 2155 aa2.88□□□□□ -1.95
CCDC30-213ENST00000509712 FAM168BA1KXE4 195 aa2.87□□□□□ -1.95
CCDC30-213ENST00000509712 SPINK13Q1W4C9 94 aa2.87□□□□□ -1.95
CCDC30-213ENST00000509712 WNK2Q9Y3S1 2297 aa2.87□□□□□ -1.95
CCDC30-213ENST00000509712 CUL9Q8IWT3 2517 aa2.87□□□□□ -1.95
CCDC30-213ENST00000509712 OBSCNQ5VST9 7968 aa2.87□□□□□ -1.95
CCDC30-213ENST00000509712 DEFB1P60022 68 aa2.87□□□□□ -1.95
CCDC30-213ENST00000509712 SSBP3-AS1Q7Z2R9 100 aa2.86□□□□□ -1.95
CCDC30-213ENST00000509712 KRTAP4-3Q9BYR4 195 aa2.86□□□□□ -1.95
CCDC30-213ENST00000509712 MKI67P46013 3256 aaKnown RBP2.86□□□□□ -1.95
CCDC30-213ENST00000509712 MMP24-AS1A0A0U1RRL7 71 aa2.85□□□□□ -1.95
CCDC30-213ENST00000509712 C5orf56Q8N8D9 126 aa2.85□□□□□ -1.95
CCDC30-213ENST00000509712 A0A0G2JQZ4 141 aa2.84□□□□□ -1.95
CCDC30-213ENST00000509712 A0A1W2PNN7 141 aa2.84□□□□□ -1.95
CCDC30-213ENST00000509712 SZT2Q5T011 3432 aa2.84□□□□□ -1.96
CCDC30-213ENST00000509712 ANKRD17O75179 2603 aaKnown RBP2.83□□□□□ -1.96
CCDC30-213ENST00000509712 KRTAP10-5P60370 271 aa2.83□□□□□ -1.96
CCDC30-213ENST00000509712 RPL37AP61513 92 aaKnown RBP2.83□□□□□ -1.96
CCDC30-213ENST00000509712 NOTCH3Q9UM47 2321 aa2.83□□□□□ -1.96
CCDC30-213ENST00000509712 HTTP42858 3142 aa2.83□□□□□ -1.96
CCDC30-213ENST00000509712 LCE3CQ5T5A8 94 aa2.83□□□□□ -1.96
CCDC30-213ENST00000509712 CLPSL2Q6UWE3 100 aa2.83□□□□□ -1.96
CCDC30-213ENST00000509712 DEFB105AQ8NG35 78 aa2.83□□□□□ -1.96
CCDC30-213ENST00000509712 TYMSOSQ8TAI1 123 aa2.83□□□□□ -1.96
CCDC30-213ENST00000509712 BRCA2P51587 3418 aa2.82□□□□□ -1.96
CCDC30-213ENST00000509712 ALMS1Q8TCU4 4167 aa2.82□□□□□ -1.96
CCDC30-213ENST00000509712 Q6ZRX8 168 aa2.82□□□□□ -1.96
CCDC30-213ENST00000509712 CENPFP49454 3210 aa2.81□□□□□ -1.96
CCDC30-213ENST00000509712 DEFB109BQ30KR1 87 aa2.81□□□□□ -1.96
CCDC30-213ENST00000509712 C16orf74Q96GX8 76 aa2.81□□□□□ -1.96
CCDC30-213ENST00000509712 COL6A3P12111 3177 aa2.81□□□□□ -1.96
CCDC30-213ENST00000509712 SPTBN1Q01082 2364 aaKnown RBP2.8□□□□□ -1.96
CCDC30-213ENST00000509712 DEFB133Q30KQ1 61 aa2.8□□□□□ -1.96
CCDC30-213ENST00000509712 GIG44P09565 113 aaPredicted RBP2.79□□□□□ -1.96
CCDC30-213ENST00000509712 IGFL1Q6UW32 110 aa2.79□□□□□ -1.96
CCDC30-213ENST00000509712 UNQ6190/PRO20217Q6UXQ8 127 aa2.79□□□□□ -1.96
CCDC30-213ENST00000509712 MRPL34Q9BQ48 92 aaKnown RBP2.79□□□□□ -1.96
CCDC30-213ENST00000509712 PSORS1C2Q9UIG4 136 aa2.79□□□□□ -1.96
CCDC30-213ENST00000509712 CNOT1A5YKK6 2376 aaKnown RBP2.79□□□□□ -1.96
CCDC30-213ENST00000509712 RANBP2P49792 3224 aaKnown RBP2.79□□□□□ -1.96
CCDC30-213ENST00000509712 G3V318 75 aa2.78□□□□□ -1.96
CCDC30-213ENST00000509712 HTN1P15515 57 aa2.78□□□□□ -1.96
CCDC30-213ENST00000509712 SPRR1AP35321 89 aa2.78□□□□□ -1.96
CCDC30-213ENST00000509712 DEFB123Q8N688 67 aa2.78□□□□□ -1.96
CCDC30-213ENST00000509712 PRO2289Q9P1D8 64 aa2.78□□□□□ -1.96
CCDC30-213ENST00000509712 TRIOBPQ9H2D6 2365 aa2.78□□□□□ -1.96
CCDC30-213ENST00000509712 A0A1B0GVY2 172 aa2.78□□□□□ -1.96
CCDC30-213ENST00000509712 COX6B2Q6YFQ2 88 aa2.78□□□□□ -1.96
CCDC30-213ENST00000509712 CACNA1BQ00975 2339 aa2.77□□□□□ -1.97
CCDC30-213ENST00000509712 LAMA3Q16787 3333 aa2.77□□□□□ -1.97
CCDC30-213ENST00000509712 H0YAA0 97 aa2.77□□□□□ -1.97
CCDC30-213ENST00000509712 WNK1Q9H4A3 2382 aa2.77□□□□□ -1.97
CCDC30-213ENST00000509712 UNC80Q8N2C7 3258 aa2.77□□□□□ -1.97
CCDC30-213ENST00000509712 SPTBN5Q9NRC6 3674 aaKnown RBP2.76□□□□□ -1.97
CCDC30-213ENST00000509712 H3BUX3 64 aa2.75□□□□□ -1.97
CCDC30-213ENST00000509712 VCANP13611 3396 aa2.75□□□□□ -1.97
CCDC30-213ENST00000509712 KRTAP13-3Q3SY46 172 aa2.74□□□□□ -1.97
CCDC30-213ENST00000509712 CRIPTQ9P021 101 aa2.74□□□□□ -1.97
CCDC30-213ENST00000509712 CACNA1GO43497 2377 aa2.74□□□□□ -1.97
CCDC30-213ENST00000509712 TPRXLQ17RH7 258 aa2.74□□□□□ -1.97
CCDC30-213ENST00000509712 Q6ZSA8 131 aa2.74□□□□□ -1.97
CCDC30-213ENST00000509712 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.73□□□□□ -1.97
CCDC30-213ENST00000509712 WDR87Q6ZQQ6 2873 aa2.73□□□□□ -1.97
CCDC30-213ENST00000509712 MUC3AQ02505 3323 aa2.73□□□□□ -1.97
CCDC30-213ENST00000509712 EYSQ5T1H1 3165 aa2.72□□□□□ -1.97
CCDC30-213ENST00000509712 CEP290O15078 2479 aa2.72□□□□□ -1.97
CCDC30-213ENST00000509712 TPRP12270 2363 aaKnown RBP2.72□□□□□ -1.97
CCDC30-213ENST00000509712 KRTAP1-4P0C5Y4 121 aa2.72□□□□□ -1.97
CCDC30-213ENST00000509712 SPRR1BP22528 89 aa2.72□□□□□ -1.97
CCDC30-213ENST00000509712 COL6A6A6NMZ7 2263 aa2.71□□□□□ -1.98
CCDC30-213ENST00000509712 H1FX-AS1Q4G0G2 97 aa2.7□□□□□ -1.98
CCDC30-213ENST00000509712 DEFB119Q8N690 84 aa2.7□□□□□ -1.98
CCDC30-213ENST00000509712 PLAC4Q8WY50 150 aa2.7□□□□□ -1.98
CCDC30-213ENST00000509712 PRUNE2Q8WUY3 3088 aa2.7□□□□□ -1.98
CCDC30-213ENST00000509712 LAMA2P24043 3122 aaKnown RBP2.7□□□□□ -1.98
CCDC30-213ENST00000509712 CACNA1EQ15878 2313 aa2.7□□□□□ -1.98
CCDC30-213ENST00000509712 MGAQ8IWI9 3026 aa2.7□□□□□ -1.98
CCDC30-213ENST00000509712 KRTAP10-3P60369 221 aa2.69□□□□□ -1.98
CCDC30-213ENST00000509712 LY6EQ16553 131 aa2.69□□□□□ -1.98
CCDC30-213ENST00000509712 NOP10Q9NPE3 64 aaKnown RBP2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms