RNA–Protein interactions for RNA: ENST00000508936.1

SMAD1-AS2-201, SMAD1 antisense RNA 2, humanhuman

TSL 1 (best) BASIC

Gene SMAD1-AS2, Length 1,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-AS2-201ENST00000508936 DEFB114Q30KQ6 69 aa0.7□□□□□ -2.3
SMAD1-AS2-201ENST00000508936 USMG5Q96IX5 58 aa0.7□□□□□ -2.3
SMAD1-AS2-201ENST00000508936 KCNQ1DNQ9H478 68 aa0.7□□□□□ -2.3
SMAD1-AS2-201ENST00000508936 AHCTF1Q8WYP5 2266 aa0.69□□□□□ -2.3
SMAD1-AS2-201ENST00000508936 EFCAB6Q5THR3 1501 aa0.69□□□□□ -2.3
SMAD1-AS2-201ENST00000508936 ROS1P08922 2347 aa0.69□□□□□ -2.3
SMAD1-AS2-201ENST00000508936 SNRPGP15A8MWD9 76 aa0.69□□□□□ -2.3
SMAD1-AS2-201ENST00000508936 CRIPTQ9P021 101 aa0.69□□□□□ -2.3
SMAD1-AS2-201ENST00000508936 PRO0255Q9UI72 69 aa0.69□□□□□ -2.3
SMAD1-AS2-201ENST00000508936 DDX60Q8IY21 1712 aaKnown RBP0.69□□□□□ -2.3
SMAD1-AS2-201ENST00000508936 ASH1LQ9NR48 2969 aaKnown RBP0.69□□□□□ -2.3
SMAD1-AS2-201ENST00000508936 TNCP24821 2201 aa0.68□□□□□ -2.3
SMAD1-AS2-201ENST00000508936 A0A0D9SG42 100 aa0.68□□□□□ -2.3
SMAD1-AS2-201ENST00000508936 I3L3M4 83 aa0.68□□□□□ -2.3
SMAD1-AS2-201ENST00000508936 FCER1GP30273 86 aa0.68□□□□□ -2.3
SMAD1-AS2-201ENST00000508936 CDC42BPAQ5VT25 1732 aa0.68□□□□□ -2.3
SMAD1-AS2-201ENST00000508936 MRPL34Q9BQ48 92 aaKnown RBP0.68□□□□□ -2.3
SMAD1-AS2-201ENST00000508936 COL6A6A6NMZ7 2263 aa0.68□□□□□ -2.3
SMAD1-AS2-201ENST00000508936 IQGAP1P46940 1657 aa0.68□□□□□ -2.3
SMAD1-AS2-201ENST00000508936 AGLP35573 1532 aa0.68□□□□□ -2.3
SMAD1-AS2-201ENST00000508936 FAM208BQ5VWN6 2430 aa0.67□□□□□ -2.3
SMAD1-AS2-201ENST00000508936 DEFB131BA0A096LNP1 70 aa0.67□□□□□ -2.3
SMAD1-AS2-201ENST00000508936 ETDCA0A1B0GVM5 59 aa0.67□□□□□ -2.3
SMAD1-AS2-201ENST00000508936 MRPL33O75394 65 aaKnown RBP0.67□□□□□ -2.3
SMAD1-AS2-201ENST00000508936 COX6A2Q02221 97 aa0.67□□□□□ -2.3
SMAD1-AS2-201ENST00000508936 Q8IZM0 81 aa0.67□□□□□ -2.3
SMAD1-AS2-201ENST00000508936 KIAA0586Q9BVV6 1533 aa0.67□□□□□ -2.3
SMAD1-AS2-201ENST00000508936 K7EMI3 77 aa0.66□□□□□ -2.3
SMAD1-AS2-201ENST00000508936 M0R1W7 72 aa0.66□□□□□ -2.3
SMAD1-AS2-201ENST00000508936 CCL22O00626 93 aa0.66□□□□□ -2.3
SMAD1-AS2-201ENST00000508936 NCBP2-AS2Q69YL0 99 aa0.66□□□□□ -2.3
SMAD1-AS2-201ENST00000508936 DEPDC5O75140 1603 aa0.66□□□□□ -2.3
SMAD1-AS2-201ENST00000508936 LMO7Q8WWI1 1683 aa0.65□□□□□ -2.3
SMAD1-AS2-201ENST00000508936 JMJD1CQ15652 2540 aa0.65□□□□□ -2.31
SMAD1-AS2-201ENST00000508936 COX6B1P14854 86 aa0.65□□□□□ -2.31
SMAD1-AS2-201ENST00000508936 SERF2P84101 59 aa0.65□□□□□ -2.31
SMAD1-AS2-201ENST00000508936 NMES1Q9C002 83 aa0.65□□□□□ -2.31
SMAD1-AS2-201ENST00000508936 DOPEY2Q9Y3R5 2298 aa0.64□□□□□ -2.31
SMAD1-AS2-201ENST00000508936 IGIPA6NJ69 53 aa0.64□□□□□ -2.31
SMAD1-AS2-201ENST00000508936 PRB3Q04118 309 aaPredicted RBP0.64□□□□□ -2.31
SMAD1-AS2-201ENST00000508936 Q5VSD8 79 aa0.64□□□□□ -2.31
SMAD1-AS2-201ENST00000508936 COX6B2Q6YFQ2 88 aa0.64□□□□□ -2.31
SMAD1-AS2-201ENST00000508936 ANKRD17O75179 2603 aaKnown RBP0.64□□□□□ -2.31
SMAD1-AS2-201ENST00000508936 CACNA1EQ15878 2313 aa0.64□□□□□ -2.31
SMAD1-AS2-201ENST00000508936 GOLGA4Q13439 2230 aaKnown RBP0.64□□□□□ -2.31
SMAD1-AS2-201ENST00000508936 SPRR1AP35321 89 aa0.63□□□□□ -2.31
SMAD1-AS2-201ENST00000508936 CMC2Q9NRP2 79 aa0.63□□□□□ -2.31
SMAD1-AS2-201ENST00000508936 PLCE1Q9P212 2302 aa0.63□□□□□ -2.31
SMAD1-AS2-201ENST00000508936 CNOT1A5YKK6 2376 aaKnown RBP0.62□□□□□ -2.31
SMAD1-AS2-201ENST00000508936 NDUFA3O95167 84 aa0.62□□□□□ -2.31
SMAD1-AS2-201ENST00000508936 PLNP26678 52 aa0.62□□□□□ -2.31
SMAD1-AS2-201ENST00000508936 CRIP1P50238 77 aa0.62□□□□□ -2.31
SMAD1-AS2-201ENST00000508936 CDKN2A-AS1Q9UH64 79 aa0.62□□□□□ -2.31
SMAD1-AS2-201ENST00000508936 MEGF8Q7Z7M0 2845 aa0.62□□□□□ -2.31
SMAD1-AS2-201ENST00000508936 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.61□□□□□ -2.31
SMAD1-AS2-201ENST00000508936 USF3Q68DE3 2245 aa0.61□□□□□ -2.31
SMAD1-AS2-201ENST00000508936 PRH1P02810 166 aa0.61□□□□□ -2.31
SMAD1-AS2-201ENST00000508936 H1FX-AS1Q4G0G2 97 aa0.61□□□□□ -2.31
SMAD1-AS2-201ENST00000508936 LELP1Q5T871 98 aa0.61□□□□□ -2.31
SMAD1-AS2-201ENST00000508936 DEFB105AQ8NG35 78 aa0.61□□□□□ -2.31
SMAD1-AS2-201ENST00000508936 PRO3102Q9H379 93 aa0.61□□□□□ -2.31
SMAD1-AS2-201ENST00000508936 TRPM2O94759 1503 aa0.6□□□□□ -2.31
SMAD1-AS2-201ENST00000508936 ATP7AQ04656 1500 aa0.6□□□□□ -2.31
SMAD1-AS2-201ENST00000508936 H0YAA0 97 aa0.6□□□□□ -2.31
SMAD1-AS2-201ENST00000508936 SPRR1BP22528 89 aa0.6□□□□□ -2.31
SMAD1-AS2-201ENST00000508936 LINC00158P58513 81 aa0.6□□□□□ -2.31
SMAD1-AS2-201ENST00000508936 TOMM5Q8N4H5 51 aa0.6□□□□□ -2.31
SMAD1-AS2-201ENST00000508936 APLNQ9ULZ1 77 aa0.6□□□□□ -2.31
SMAD1-AS2-201ENST00000508936 NOTCH1P46531 2555 aa0.6□□□□□ -2.31
SMAD1-AS2-201ENST00000508936 PTPRZ1P23471 2315 aaPredicted RBP0.6□□□□□ -2.31
SMAD1-AS2-201ENST00000508936 PTPRQQ9UMZ3 2332 aa0.6□□□□□ -2.31
SMAD1-AS2-201ENST00000508936 ANK2Q01484 3957 aa0.6□□□□□ -2.31
SMAD1-AS2-201ENST00000508936 LYNX1G3V0Z9 82 aa0.59□□□□□ -2.31
SMAD1-AS2-201ENST00000508936 BPTFQ12830 3046 aa0.58□□□□□ -2.32
SMAD1-AS2-201ENST00000508936 LOC730098B7Z3J9 87 aa0.58□□□□□ -2.32
SMAD1-AS2-201ENST00000508936 H0YGX0 51 aa0.58□□□□□ -2.32
SMAD1-AS2-201ENST00000508936 WFDC13Q8IUB5 93 aa0.58□□□□□ -2.32
SMAD1-AS2-201ENST00000508936 ABRACLQ9P1F3 81 aa0.58□□□□□ -2.32
SMAD1-AS2-201ENST00000508936 SMIM27A0A1W2PRY6 76 aa0.57□□□□□ -2.32
SMAD1-AS2-201ENST00000508936 LINC01546A6NGU7 62 aa0.57□□□□□ -2.32
SMAD1-AS2-201ENST00000508936 KLK9Q2XQG4 91 aa0.57□□□□□ -2.32
SMAD1-AS2-201ENST00000508936 TMEM167BQ9NRX6 74 aa0.57□□□□□ -2.32
SMAD1-AS2-201ENST00000508936 NFAT5O94916 1531 aa0.57□□□□□ -2.32
SMAD1-AS2-201ENST00000508936 IAPPP10997 89 aa0.56□□□□□ -2.32
SMAD1-AS2-201ENST00000508936 MINOS1Q5TGZ0 78 aa0.56□□□□□ -2.32
SMAD1-AS2-201ENST00000508936 CACNA1HO95180 2353 aa0.56□□□□□ -2.32
SMAD1-AS2-201ENST00000508936 C2CD3Q4AC94 2353 aa0.56□□□□□ -2.32
SMAD1-AS2-201ENST00000508936 KIF21BO75037 1637 aa0.56□□□□□ -2.32
SMAD1-AS2-201ENST00000508936 ZNF462Q96JM2 2506 aa0.56□□□□□ -2.32
SMAD1-AS2-201ENST00000508936 SAMD9LQ8IVG5 1584 aa0.55□□□□□ -2.32
SMAD1-AS2-201ENST00000508936 PIEZO2Q9H5I5 2752 aa0.55□□□□□ -2.32
SMAD1-AS2-201ENST00000508936 ZNF469Q96JG9 3925 aaPredicted RBP0.55□□□□□ -2.32
SMAD1-AS2-201ENST00000508936 AHNAKQ09666 5890 aaKnown RBP0.54□□□□□ -2.32
SMAD1-AS2-201ENST00000508936 CLTCL1P53675 1640 aa0.54□□□□□ -2.32
SMAD1-AS2-201ENST00000508936 TTC28Q96AY4 2481 aa0.54□□□□□ -2.32
SMAD1-AS2-201ENST00000508936 SPINK4O60575 86 aa0.54□□□□□ -2.32
SMAD1-AS2-201ENST00000508936 LINC00308Q8TCZ7 52 aa0.54□□□□□ -2.32
SMAD1-AS2-201ENST00000508936 C6orf48Q9UBA6 75 aa0.54□□□□□ -2.32
SMAD1-AS2-201ENST00000508936 TIMM8BQ9Y5J9 83 aaPredicted RBP0.54□□□□□ -2.32
SMAD1-AS2-201ENST00000508936 FRAS1Q86XX4 4008 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms