RNA–Protein interactions for RNA: ENST00000508657.5

KLHL3-209, Transcript of kelch like family member 3, humanhuman

TSL 1 (best) BASIC

Gene KLHL3, Length 6,981 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-209ENST00000508657 MRPL34Q9BQ48 92 aaKnown RBP5.94□□□□□ -1.46
KLHL3-209ENST00000508657 PKD1L2Q7Z442 2459 aa5.93□□□□□ -1.46
KLHL3-209ENST00000508657 IGLV5-45A0A087WSX0 123 aa5.93□□□□□ -1.46
KLHL3-209ENST00000508657 FAM218AQ96MZ4 157 aa5.92□□□□□ -1.46
KLHL3-209ENST00000508657 C19orf73Q9NVV2 129 aa5.92□□□□□ -1.46
KLHL3-209ENST00000508657 C8orf87E5RJ46 101 aa5.91□□□□□ -1.46
KLHL3-209ENST00000508657 CAMK2N1Q7Z7J9 78 aa5.91□□□□□ -1.46
KLHL3-209ENST00000508657 CRIPTQ9P021 101 aa5.91□□□□□ -1.46
KLHL3-209ENST00000508657 CXCL6P80162 114 aa5.9□□□□□ -1.46
KLHL3-209ENST00000508657 Q6ZQT0 140 aa5.9□□□□□ -1.46
KLHL3-209ENST00000508657 A0A096LNJ9 63 aa5.89□□□□□ -1.47
KLHL3-209ENST00000508657 TRBV7-4A0A0J9YYF1 115 aa5.89□□□□□ -1.47
KLHL3-209ENST00000508657 LINC01546A6NGU7 62 aa5.89□□□□□ -1.47
KLHL3-209ENST00000508657 A8MWP4 228 aa5.88□□□□□ -1.47
KLHL3-209ENST00000508657 IGFL1Q6UW32 110 aa5.88□□□□□ -1.47
KLHL3-209ENST00000508657 VPREB1P12018 145 aa5.87□□□□□ -1.47
KLHL3-209ENST00000508657 LINC00612Q8N6U2 182 aa5.87□□□□□ -1.47
KLHL3-209ENST00000508657 USP24Q9UPU5 2620 aa5.86□□□□□ -1.47
KLHL3-209ENST00000508657 C8orf17Q9NRJ1 99 aa5.85□□□□□ -1.47
KLHL3-209ENST00000508657 LOC101927531A0A1B0GV80 90 aa5.84□□□□□ -1.47
KLHL3-209ENST00000508657 C9orf163Q8N9P6 203 aa5.84□□□□□ -1.47
KLHL3-209ENST00000508657 XIRP2A4UGR9 3374 aa5.83□□□□□ -1.48
KLHL3-209ENST00000508657 CEP295Q9C0D2 2601 aa5.83□□□□□ -1.48
KLHL3-209ENST00000508657 USP9YO00507 2555 aaPredicted RBP5.82□□□□□ -1.48
KLHL3-209ENST00000508657 BRCA2P51587 3418 aa5.82□□□□□ -1.48
KLHL3-209ENST00000508657 A0A1B0GVX0 72 aa5.82□□□□□ -1.48
KLHL3-209ENST00000508657 PRO0461Q9UI25 63 aa5.81□□□□□ -1.48
KLHL3-209ENST00000508657 HECTD1Q9ULT8 2610 aa5.8□□□□□ -1.48
KLHL3-209ENST00000508657 COA5Q86WW8 74 aa5.8□□□□□ -1.48
KLHL3-209ENST00000508657 FLNBO75369 2602 aaKnown RBP5.8□□□□□ -1.48
KLHL3-209ENST00000508657 PCSK5Q92824 1860 aa5.8□□□□□ -1.48
KLHL3-209ENST00000508657 MGAM2Q2M2H8 2515 aa5.8□□□□□ -1.48
KLHL3-209ENST00000508657 DNAH12Q6ZR08 3092 aa5.79□□□□□ -1.48
KLHL3-209ENST00000508657 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.78□□□□□ -1.48
KLHL3-209ENST00000508657 ERC2-IT1O76042 136 aa5.78□□□□□ -1.48
KLHL3-209ENST00000508657 RPS28P62857 69 aaKnown RBP5.78□□□□□ -1.48
KLHL3-209ENST00000508657 SPRR4Q96PI1 79 aa5.78□□□□□ -1.48
KLHL3-209ENST00000508657 KRTAP1-3Q8IUG1 177 aa5.78□□□□□ -1.48
KLHL3-209ENST00000508657 BPTFQ12830 3046 aa5.77□□□□□ -1.49
KLHL3-209ENST00000508657 PRR15Q8IV56 129 aa5.76□□□□□ -1.49
KLHL3-209ENST00000508657 KCNQ1DNQ9H478 68 aa5.76□□□□□ -1.49
KLHL3-209ENST00000508657 MIR22HGQ0VDD5 57 aa5.75□□□□□ -1.49
KLHL3-209ENST00000508657 C4orf26Q17RF5 130 aa5.75□□□□□ -1.49
KLHL3-209ENST00000508657 EPG5Q9HCE0 2579 aa5.75□□□□□ -1.49
KLHL3-209ENST00000508657 A0A096LNT2 108 aa5.74□□□□□ -1.49
KLHL3-209ENST00000508657 Q8N377 158 aa5.74□□□□□ -1.49
KLHL3-209ENST00000508657 GIG44P09565 113 aaPredicted RBP5.74□□□□□ -1.49
KLHL3-209ENST00000508657 KRTAP1-1Q07627 177 aa5.74□□□□□ -1.49
KLHL3-209ENST00000508657 SMCPP49901 116 aaPredicted RBP5.74□□□□□ -1.49
KLHL3-209ENST00000508657 UQCR11O14957 56 aa5.74□□□□□ -1.49
KLHL3-209ENST00000508657 TLX1NBP0CAT3 122 aa5.74□□□□□ -1.49
KLHL3-209ENST00000508657 LOC110117498A0A087WWA1 95 aa5.72□□□□□ -1.49
KLHL3-209ENST00000508657 C5orf42Q9H799 3197 aa5.72□□□□□ -1.49
KLHL3-209ENST00000508657 H3BPC8 53 aa5.71□□□□□ -1.5
KLHL3-209ENST00000508657 A8MUN3 132 aa5.7□□□□□ -1.5
KLHL3-209ENST00000508657 FAM104AQ969W3 186 aa5.69□□□□□ -1.5
KLHL3-209ENST00000508657 PRO0628Q9UI54 55 aa5.69□□□□□ -1.5
KLHL3-209ENST00000508657 S4R3F8 94 aa5.69□□□□□ -1.5
KLHL3-209ENST00000508657 CDC42SE1Q9NRR8 79 aa5.69□□□□□ -1.5
KLHL3-209ENST00000508657 LINC00483Q53H64 154 aa5.69□□□□□ -1.5
KLHL3-209ENST00000508657 PRR34Q9NV39 138 aa5.69□□□□□ -1.5
KLHL3-209ENST00000508657 LCE6AA0A183 80 aa5.68□□□□□ -1.5
KLHL3-209ENST00000508657 SEC61BP60468 96 aaKnown RBP5.68□□□□□ -1.5
KLHL3-209ENST00000508657 KLK9Q2XQG4 91 aa5.67□□□□□ -1.5
KLHL3-209ENST00000508657 CNBPP62633 177 aaKnown RBP5.66□□□□□ -1.5
KLHL3-209ENST00000508657 LUZP6Q538Z0 58 aa5.65□□□□□ -1.5
KLHL3-209ENST00000508657 A0A1B0GW54 56 aa5.65□□□□□ -1.5
KLHL3-209ENST00000508657 WIPF1O43516 503 aa5.65□□□□□ -1.5
KLHL3-209ENST00000508657 PLAC4Q8WY50 150 aa5.65□□□□□ -1.51
KLHL3-209ENST00000508657 EIF4EBP3O60516 100 aaPredicted RBP5.64□□□□□ -1.51
KLHL3-209ENST00000508657 ATRQ13535 2644 aa5.64□□□□□ -1.51
KLHL3-209ENST00000508657 CSAG1Q6PB30 78 aa5.64□□□□□ -1.51
KLHL3-209ENST00000508657 HRES1P13985 223 aa5.63□□□□□ -1.51
KLHL3-209ENST00000508657 CEP350Q5VT06 3117 aa5.63□□□□□ -1.51
KLHL3-209ENST00000508657 CDH23Q9H251 3354 aa5.63□□□□□ -1.51
KLHL3-209ENST00000508657 LITAFQ99732 161 aa5.63□□□□□ -1.51
KLHL3-209ENST00000508657 KRTAP10-2P60368 255 aa5.63□□□□□ -1.51
KLHL3-209ENST00000508657 R4GN34 69 aa5.63□□□□□ -1.51
KLHL3-209ENST00000508657 CR1P17927 2039 aa5.62□□□□□ -1.51
KLHL3-209ENST00000508657 KRTAP10-1P60331 282 aa5.62□□□□□ -1.51
KLHL3-209ENST00000508657 MAST4O15021 2626 aa5.6□□□□□ -1.51
KLHL3-209ENST00000508657 LCA10Q71F78 164 aa5.59□□□□□ -1.51
KLHL3-209ENST00000508657 MKI67P46013 3256 aaKnown RBP5.59□□□□□ -1.52
KLHL3-209ENST00000508657 HTTP42858 3142 aa5.58□□□□□ -1.52
KLHL3-209ENST00000508657 LAMA3Q16787 3333 aa5.57□□□□□ -1.52
KLHL3-209ENST00000508657 A0A1W2PNM2 257 aa5.56□□□□□ -1.52
KLHL3-209ENST00000508657 FLG2Q5D862 2391 aaPredicted RBP5.56□□□□□ -1.52
KLHL3-209ENST00000508657 CD164Q04900 197 aa5.56□□□□□ -1.52
KLHL3-209ENST00000508657 SZT2Q5T011 3432 aa5.56□□□□□ -1.52
KLHL3-209ENST00000508657 CELSR3Q9NYQ7 3312 aa5.54□□□□□ -1.52
KLHL3-209ENST00000508657 M0QZ58 72 aa5.54□□□□□ -1.52
KLHL3-209ENST00000508657 ZCCHC13Q8WW36 166 aaKnown RBP5.54□□□□□ -1.52
KLHL3-209ENST00000508657 A0A1B0GU33 70 aa5.53□□□□□ -1.52
KLHL3-209ENST00000508657 SPINK7P58062 85 aa5.53□□□□□ -1.52
KLHL3-209ENST00000508657 SPTBN5Q9NRC6 3674 aaKnown RBP5.52□□□□□ -1.53
KLHL3-209ENST00000508657 DNAH14Q0VDD8 3507 aa5.51□□□□□ -1.53
KLHL3-209ENST00000508657 OXTP01178 125 aa5.51□□□□□ -1.53
KLHL3-209ENST00000508657 PLAC8Q9NZF1 115 aa5.51□□□□□ -1.53
KLHL3-209ENST00000508657 USP34Q70CQ2 3546 aa5.5□□□□□ -1.53
KLHL3-209ENST00000508657 HELZ2Q9BYK8 2649 aaKnown RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms