RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 FAM229BQ4G0N7 80 aa5.47□□□□□ -1.53
UBE2D3-223ENST00000508249 S100A7L2Q5SY68 101 aa5.47□□□□□ -1.53
UBE2D3-223ENST00000508249 LINC00518Q8N0U6 118 aa5.47□□□□□ -1.53
UBE2D3-223ENST00000508249 LINC00308Q8TCZ7 52 aa5.47□□□□□ -1.53
UBE2D3-223ENST00000508249 SPANXDQ9BXN6 97 aa5.47□□□□□ -1.53
UBE2D3-223ENST00000508249 ZNF706Q9Y5V0 76 aaPredicted RBP5.47□□□□□ -1.53
UBE2D3-223ENST00000508249 TRBV10-3A0A0K0K1G6 114 aa5.46□□□□□ -1.54
UBE2D3-223ENST00000508249 C5orf52A6NGY3 159 aa5.46□□□□□ -1.54
UBE2D3-223ENST00000508249 CRYGAP11844 174 aa5.46□□□□□ -1.54
UBE2D3-223ENST00000508249 PRLHP81277 87 aa5.46□□□□□ -1.54
UBE2D3-223ENST00000508249 ANKRD39Q53RE8 183 aa5.46□□□□□ -1.54
UBE2D3-223ENST00000508249 ADAMTSL4-AS1Q5T5F5 129 aa5.46□□□□□ -1.54
UBE2D3-223ENST00000508249 LITAFQ99732 161 aa5.46□□□□□ -1.54
UBE2D3-223ENST00000508249 IGLV6-57P01721 117 aa5.45□□□□□ -1.54
UBE2D3-223ENST00000508249 HINT1P49773 126 aaPredicted RBP5.45□□□□□ -1.54
UBE2D3-223ENST00000508249 JOSD1Q15040 202 aaPredicted RBP5.45□□□□□ -1.54
UBE2D3-223ENST00000508249 TRAV23DV6A0A075B6W5 121 aa5.44□□□□□ -1.54
UBE2D3-223ENST00000508249 CTAG1AP78358 180 aa5.44□□□□□ -1.54
UBE2D3-223ENST00000508249 PRR4Q16378 134 aa5.44□□□□□ -1.54
UBE2D3-223ENST00000508249 SOSTDC1Q6X4U4 206 aa5.44□□□□□ -1.54
UBE2D3-223ENST00000508249 ATOH7Q8N100 152 aa5.44□□□□□ -1.54
UBE2D3-223ENST00000508249 HIGD2AQ9BW72 106 aa5.44□□□□□ -1.54
UBE2D3-223ENST00000508249 KRTAP4-16G5E9R7 235 aaPredicted RBP5.43□□□□□ -1.54
UBE2D3-223ENST00000508249 NPC2P61916 151 aa5.43□□□□□ -1.54
UBE2D3-223ENST00000508249 ZNF73O43830 326 aaPredicted RBP5.42□□□□□ -1.54
UBE2D3-223ENST00000508249 SCGB1D1O95968 90 aa5.42□□□□□ -1.54
UBE2D3-223ENST00000508249 TTTY13Q9BZ97 58 aa5.42□□□□□ -1.54
UBE2D3-223ENST00000508249 B5MCH6 92 aa5.41□□□□□ -1.54
UBE2D3-223ENST00000508249 Q6ZRX8 168 aa5.41□□□□□ -1.54
UBE2D3-223ENST00000508249 PCP2Q8IVA1 136 aa5.41□□□□□ -1.54
UBE2D3-223ENST00000508249 TYMSOSQ8TAI1 123 aa5.41□□□□□ -1.54
UBE2D3-223ENST00000508249 C4orf48Q5BLP8 95 aa5.4□□□□□ -1.54
UBE2D3-223ENST00000508249 OR13C6PQ8NH95 151 aa5.4□□□□□ -1.54
UBE2D3-223ENST00000508249 SPRR4Q96PI1 79 aa5.4□□□□□ -1.54
UBE2D3-223ENST00000508249 A0A087X002 238 aa5.39□□□□□ -1.55
UBE2D3-223ENST00000508249 TRAV13-2A0A0B4J235 113 aa5.39□□□□□ -1.55
UBE2D3-223ENST00000508249 EIF4EBP3O60516 100 aaPredicted RBP5.39□□□□□ -1.55
UBE2D3-223ENST00000508249 SMCR5Q8TEV8 140 aa5.39□□□□□ -1.55
UBE2D3-223ENST00000508249 TRBV7-6A0A0J9YX20 115 aa5.38□□□□□ -1.55
UBE2D3-223ENST00000508249 DLEU1O43261 78 aa5.38□□□□□ -1.55
UBE2D3-223ENST00000508249 MUSTN1Q8IVN3 82 aa5.38□□□□□ -1.55
UBE2D3-223ENST00000508249 DHRS4-AS1Q9P1J3 65 aa5.38□□□□□ -1.55
UBE2D3-223ENST00000508249 COX8AP10176 69 aa5.37□□□□□ -1.55
UBE2D3-223ENST00000508249 LINC00483Q53H64 154 aa5.37□□□□□ -1.55
UBE2D3-223ENST00000508249 SPAG11AQ6PDA7 123 aa5.37□□□□□ -1.55
UBE2D3-223ENST00000508249 A4D1N5 150 aa5.36□□□□□ -1.55
UBE2D3-223ENST00000508249 KRTAP13-2Q52LG2 175 aa5.36□□□□□ -1.55
UBE2D3-223ENST00000508249 SLC25A34Q6PIV7 304 aa5.36□□□□□ -1.55
UBE2D3-223ENST00000508249 LINC00304Q8N9R0 145 aa5.36□□□□□ -1.55
UBE2D3-223ENST00000508249 Q9BRP9 147 aa5.36□□□□□ -1.55
UBE2D3-223ENST00000508249 A0A1B0GWB2 263 aa5.35□□□□□ -1.55
UBE2D3-223ENST00000508249 A6NDN8 102 aa5.35□□□□□ -1.55
UBE2D3-223ENST00000508249 COX7BP24311 80 aa5.35□□□□□ -1.55
UBE2D3-223ENST00000508249 ELOF1P60002 83 aaKnown RBP5.35□□□□□ -1.55
UBE2D3-223ENST00000508249 VAMP8Q9BV40 100 aa5.35□□□□□ -1.55
UBE2D3-223ENST00000508249 NHP2Q9NX24 153 aaKnown RBP5.35□□□□□ -1.55
UBE2D3-223ENST00000508249 ANAPC11Q9NYG5 84 aa5.35□□□□□ -1.55
UBE2D3-223ENST00000508249 C6orf99Q4VX62 202 aa5.34□□□□□ -1.55
UBE2D3-223ENST00000508249 HIGD1BQ9P298 99 aa5.34□□□□□ -1.55
UBE2D3-223ENST00000508249 SPATA45Q537H7 98 aa5.33□□□□□ -1.56
UBE2D3-223ENST00000508249 GAGE2AQ6NT46 116 aa5.33□□□□□ -1.56
UBE2D3-223ENST00000508249 SSBP3-AS1Q7Z2R9 100 aa5.33□□□□□ -1.56
UBE2D3-223ENST00000508249 HIST1H4GQ99525 98 aa5.33□□□□□ -1.56
UBE2D3-223ENST00000508249 ERC2-IT1O76042 136 aa5.32□□□□□ -1.56
UBE2D3-223ENST00000508249 SPRR1BP22528 89 aa5.32□□□□□ -1.56
UBE2D3-223ENST00000508249 VAMP3Q15836 100 aa5.32□□□□□ -1.56
UBE2D3-223ENST00000508249 PAM16Q9Y3D7 125 aa5.32□□□□□ -1.56
UBE2D3-223ENST00000508249 TAL2Q16559 108 aa5.31□□□□□ -1.56
UBE2D3-223ENST00000508249 C3orf22Q8N5N4 141 aa5.31□□□□□ -1.56
UBE2D3-223ENST00000508249 KRTAP4-1Q9BYQ7 146 aa5.31□□□□□ -1.56
UBE2D3-223ENST00000508249 SLC25A20O43772 301 aa5.3□□□□□ -1.56
UBE2D3-223ENST00000508249 TSPAN13O95857 204 aa5.3□□□□□ -1.56
UBE2D3-223ENST00000508249 SPINK1P00995 79 aa5.3□□□□□ -1.56
UBE2D3-223ENST00000508249 RPS29P62273 56 aaKnown RBP5.3□□□□□ -1.56
UBE2D3-223ENST00000508249 TMEM238LA0A1B0GVL6 79 aa5.29□□□□□ -1.56
UBE2D3-223ENST00000508249 A6NJY4 79 aa5.29□□□□□ -1.56
UBE2D3-223ENST00000508249 TPRXLQ17RH7 258 aa5.29□□□□□ -1.56
UBE2D3-223ENST00000508249 Q8NBF4 154 aa5.29□□□□□ -1.56
UBE2D3-223ENST00000508249 SMIM11BQ8TCY0 68 aa5.29□□□□□ -1.56
UBE2D3-223ENST00000508249 C14orf144Q96I85 54 aa5.29□□□□□ -1.56
UBE2D3-223ENST00000508249 LAMTOR3Q9UHA4 124 aa5.29□□□□□ -1.56
UBE2D3-223ENST00000508249 TEX49A0A1B0GTD5 131 aa5.28□□□□□ -1.56
UBE2D3-223ENST00000508249 MOBPQ13875 183 aa5.28□□□□□ -1.56
UBE2D3-223ENST00000508249 PYY3Q5JQD4 70 aa5.28□□□□□ -1.56
UBE2D3-223ENST00000508249 BVES-AS1Q5T3Y7 98 aa5.28□□□□□ -1.56
UBE2D3-223ENST00000508249 IGLV9-49A0A0B4J1Y8 123 aa5.27□□□□□ -1.57
UBE2D3-223ENST00000508249 A0A0B4J2C4 111 aa5.27□□□□□ -1.57
UBE2D3-223ENST00000508249 C9orf153Q5TBE3 101 aa5.27□□□□□ -1.57
UBE2D3-223ENST00000508249 FP248Q71RG6 208 aaPredicted RBP5.27□□□□□ -1.57
UBE2D3-223ENST00000508249 ST20-AS1Q8NBB2 130 aa5.27□□□□□ -1.57
UBE2D3-223ENST00000508249 RETNLBQ9BQ08 111 aa5.27□□□□□ -1.57
UBE2D3-223ENST00000508249 TMA7Q9Y2S6 64 aaKnown RBP5.27□□□□□ -1.57
UBE2D3-223ENST00000508249 IGLV5-48A0A075B6I7 105 aa5.26□□□□□ -1.57
UBE2D3-223ENST00000508249 KRTAP9-7A8MTY7 169 aa5.26□□□□□ -1.57
UBE2D3-223ENST00000508249 SNCGO76070 127 aa5.26□□□□□ -1.57
UBE2D3-223ENST00000508249 LCE2CQ5TA81 110 aa5.26□□□□□ -1.57
UBE2D3-223ENST00000508249 RAB37Q96AX2 223 aa5.26□□□□□ -1.57
UBE2D3-223ENST00000508249 SMCPP49901 116 aaPredicted RBP5.25□□□□□ -1.57
UBE2D3-223ENST00000508249 C2orf91Q6ZV80 131 aa5.25□□□□□ -1.57
UBE2D3-223ENST00000508249 CEND1Q8N111 149 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms