RNA–Protein interactions for RNA: ENST00000507320.5

TRIM6-209, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-209ENST00000507320 Q8NDZ9 215 aa6.73□□□□□ -1.33
TRIM6-209ENST00000507320 NPC2P61916 151 aa6.72□□□□□ -1.33
TRIM6-209ENST00000507320 SERTAD4-AS1Q5TG53 156 aa6.72□□□□□ -1.33
TRIM6-209ENST00000507320 PPDPFLQ8WWR9 84 aa6.72□□□□□ -1.33
TRIM6-209ENST00000507320 HSPG2P98160 4391 aa6.72□□□□□ -1.33
TRIM6-209ENST00000507320 TIMM17BO60830 172 aa6.72□□□□□ -1.33
TRIM6-209ENST00000507320 SOSTDC1Q6X4U4 206 aa6.72□□□□□ -1.33
TRIM6-209ENST00000507320 C3orf22Q8N5N4 141 aa6.72□□□□□ -1.33
TRIM6-209ENST00000507320 KRTAP4-8Q9BYQ9 185 aa6.72□□□□□ -1.33
TRIM6-209ENST00000507320 PLAC8Q9NZF1 115 aa6.72□□□□□ -1.33
TRIM6-209ENST00000507320 FAM236DA0A1B0GTK5 79 aa6.71□□□□□ -1.34
TRIM6-209ENST00000507320 UQCRQO14949 82 aa6.71□□□□□ -1.34
TRIM6-209ENST00000507320 FAM236CP0DP71 79 aa6.71□□□□□ -1.34
TRIM6-209ENST00000507320 EPM2AB3EWF7 344 aa6.7□□□□□ -1.34
TRIM6-209ENST00000507320 CDK2AP2O75956 126 aa6.7□□□□□ -1.34
TRIM6-209ENST00000507320 SNCGO76070 127 aa6.7□□□□□ -1.34
TRIM6-209ENST00000507320 FAT1Q14517 4588 aa6.7□□□□□ -1.34
TRIM6-209ENST00000507320 BIRC6Q9NR09 4857 aa6.69□□□□□ -1.34
TRIM6-209ENST00000507320 LOC107984156A0A0G2JMH3 177 aa6.69□□□□□ -1.34
TRIM6-209ENST00000507320 VPREB1P12018 145 aa6.69□□□□□ -1.34
TRIM6-209ENST00000507320 ARL17AQ8IVW1 177 aa6.69□□□□□ -1.34
TRIM6-209ENST00000507320 LINC00308Q8TCZ7 52 aa6.69□□□□□ -1.34
TRIM6-209ENST00000507320 A0A1B0GWB2 263 aa6.68□□□□□ -1.34
TRIM6-209ENST00000507320 SMR3BP02814 79 aaPredicted RBP6.68□□□□□ -1.34
TRIM6-209ENST00000507320 PRR3P79522 188 aaKnown RBP6.68□□□□□ -1.34
TRIM6-209ENST00000507320 C9orf153Q5TBE3 101 aa6.68□□□□□ -1.34
TRIM6-209ENST00000507320 PHF5AQ7RTV0 110 aaKnown RBP6.68□□□□□ -1.34
TRIM6-209ENST00000507320 PLA2G2DQ9UNK4 145 aa6.68□□□□□ -1.34
TRIM6-209ENST00000507320 C22orf24Q9Y442 160 aa6.68□□□□□ -1.34
TRIM6-209ENST00000507320 RYR1P21817 5038 aa6.67□□□□□ -1.34
TRIM6-209ENST00000507320 TMEM258P61165 79 aa6.67□□□□□ -1.34
TRIM6-209ENST00000507320 KRTAP17-1Q9BYP8 105 aa6.67□□□□□ -1.34
TRIM6-209ENST00000507320 FAM236AA0A1B0GUQ0 79 aa6.67□□□□□ -1.34
TRIM6-209ENST00000507320 FAM236BA0A1B0GV22 79 aa6.67□□□□□ -1.34
TRIM6-209ENST00000507320 CRYGAP11844 174 aa6.67□□□□□ -1.34
TRIM6-209ENST00000507320 IGLV5-37A0A075B6J1 123 aa6.66□□□□□ -1.34
TRIM6-209ENST00000507320 SRSF9Q13242 221 aaKnown RBP eCLIP6.66□□□□□ -1.34
TRIM6-209ENST00000507320 KRTAP11-1Q8IUC1 163 aa6.66□□□□□ -1.34
TRIM6-209ENST00000507320 MUSTN1Q8IVN3 82 aa6.66□□□□□ -1.34
TRIM6-209ENST00000507320 HIGD1BQ9P298 99 aa6.66□□□□□ -1.34
TRIM6-209ENST00000507320 NCR3O14931 201 aa6.64□□□□□ -1.35
TRIM6-209ENST00000507320 GAGE2AQ6NT46 116 aa6.64□□□□□ -1.35
TRIM6-209ENST00000507320 MRPL55Q7Z7F7 128 aaKnown RBP6.64□□□□□ -1.35
TRIM6-209ENST00000507320 NKAPP1Q8N9T2 125 aa6.64□□□□□ -1.35
TRIM6-209ENST00000507320 C7orf33Q8WU49 177 aa6.64□□□□□ -1.35
TRIM6-209ENST00000507320 VPS13BQ7Z7G8 4022 aa6.64□□□□□ -1.35
TRIM6-209ENST00000507320 NDUFC2O95298 119 aa6.64□□□□□ -1.35
TRIM6-209ENST00000507320 TEN1Q86WV5 123 aa6.64□□□□□ -1.35
TRIM6-209ENST00000507320 LINC00167Q96N53 147 aa6.64□□□□□ -1.35
TRIM6-209ENST00000507320 HIST1H4GQ99525 98 aa6.64□□□□□ -1.35
TRIM6-209ENST00000507320 IGKV2-28A0A075B6P5 120 aa6.63□□□□□ -1.35
TRIM6-209ENST00000507320 RPL37AP8A6NKH3 93 aa6.63□□□□□ -1.35
TRIM6-209ENST00000507320 IGKV2D-28P01615 120 aa6.63□□□□□ -1.35
TRIM6-209ENST00000507320 PMAIP1Q13794 54 aa6.63□□□□□ -1.35
TRIM6-209ENST00000507320 LINC00528Q8N1L1 170 aa6.63□□□□□ -1.35
TRIM6-209ENST00000507320 RAB37Q96AX2 223 aa6.63□□□□□ -1.35
TRIM6-209ENST00000507320 IMUPQ9GZP8 106 aa6.63□□□□□ -1.35
TRIM6-209ENST00000507320 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.62□□□□□ -1.35
TRIM6-209ENST00000507320 TRBV7-7A0A0K0K1E9 115 aa6.62□□□□□ -1.35
TRIM6-209ENST00000507320 XP32Q5T750 250 aa6.62□□□□□ -1.35
TRIM6-209ENST00000507320 M0R378 163 aa6.61□□□□□ -1.35
TRIM6-209ENST00000507320 UBE2BP63146 152 aa6.61□□□□□ -1.35
TRIM6-209ENST00000507320 IGLV1-50A0A075B6I6 118 aa6.6□□□□□ -1.35
TRIM6-209ENST00000507320 TRBV10-3A0A0K0K1G6 114 aa6.6□□□□□ -1.35
TRIM6-209ENST00000507320 SMCPP49901 116 aaPredicted RBP6.6□□□□□ -1.35
TRIM6-209ENST00000507320 ANKRD29Q8N6D5 301 aa6.6□□□□□ -1.35
TRIM6-209ENST00000507320 LINC00337Q8N6G1 96 aa6.6□□□□□ -1.35
TRIM6-209ENST00000507320 COPS9Q8WXC6 57 aa6.6□□□□□ -1.35
TRIM6-209ENST00000507320 PSORS1C2Q9UIG4 136 aa6.6□□□□□ -1.35
TRIM6-209ENST00000507320 SRRM2Q9UQ35 2752 aaKnown RBP6.6□□□□□ -1.35
TRIM6-209ENST00000507320 TRBV10-2A0A0K0K1G8 114 aa6.59□□□□□ -1.35
TRIM6-209ENST00000507320 RPL13AP40429 203 aaKnown RBP6.59□□□□□ -1.35
TRIM6-209ENST00000507320 KRTAP9-2Q9BYQ4 174 aa6.59□□□□□ -1.35
TRIM6-209ENST00000507320 TRACP01848 142 aa6.59□□□□□ -1.35
TRIM6-209ENST00000507320 CEND1Q8N111 149 aa6.59□□□□□ -1.35
TRIM6-209ENST00000507320 KRTAP9-6A0A140TA67 174 aa6.58□□□□□ -1.36
TRIM6-209ENST00000507320 IGLV6-57P01721 117 aa6.58□□□□□ -1.36
TRIM6-209ENST00000507320 COX7CP15954 63 aa6.58□□□□□ -1.36
TRIM6-209ENST00000507320 FXYD2P54710 66 aa6.58□□□□□ -1.36
TRIM6-209ENST00000507320 KRTAP10-4P60372 401 aaPredicted RBP6.58□□□□□ -1.36
TRIM6-209ENST00000507320 Q5VSD8 79 aa6.58□□□□□ -1.36
TRIM6-209ENST00000507320 Q8N1X5 172 aa6.58□□□□□ -1.36
TRIM6-209ENST00000507320 LYRM7Q5U5X0 104 aa6.57□□□□□ -1.36
TRIM6-209ENST00000507320 LINC01600Q96MT4 127 aa6.57□□□□□ -1.36
TRIM6-209ENST00000507320 RPL37AP61513 92 aaKnown RBP6.57□□□□□ -1.36
TRIM6-209ENST00000507320 S100A7L2Q5SY68 101 aa6.57□□□□□ -1.36
TRIM6-209ENST00000507320 FAM229AH3BQW9 127 aa6.56□□□□□ -1.36
TRIM6-209ENST00000507320 C1orf137Q5JT78 98 aa6.56□□□□□ -1.36
TRIM6-209ENST00000507320 KRTAP4-5Q9BYR2 181 aa6.56□□□□□ -1.36
TRIM6-209ENST00000507320 HERC2O95714 4834 aa6.55□□□□□ -1.36
TRIM6-209ENST00000507320 CFC1BP0CG36 223 aa6.55□□□□□ -1.36
TRIM6-209ENST00000507320 CFC1P0CG37 223 aa6.55□□□□□ -1.36
TRIM6-209ENST00000507320 KCNQ1DNQ9H478 68 aa6.55□□□□□ -1.36
TRIM6-209ENST00000507320 REG3GQ6UW15 175 aa6.54□□□□□ -1.36
TRIM6-209ENST00000507320 TRAV23DV6A0A075B6W5 121 aa6.53□□□□□ -1.36
TRIM6-209ENST00000507320 TRAV13-2A0A0B4J235 113 aa6.53□□□□□ -1.36
TRIM6-209ENST00000507320 PRYO14603 147 aa6.53□□□□□ -1.36
TRIM6-209ENST00000507320 SPRR1AP35321 89 aa6.53□□□□□ -1.36
TRIM6-209ENST00000507320 KRTAP4-16G5E9R7 235 aaPredicted RBP6.52□□□□□ -1.37
TRIM6-209ENST00000507320 BCE1O60756 84 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms