RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 TMA7Q9Y2S6 64 aaKnown RBP5.22□□□□□ -1.57
PDGFC-205ENST00000506880 TMEM238LA0A1B0GVL6 79 aa5.21□□□□□ -1.58
PDGFC-205ENST00000506880 HINT1P49773 126 aaPredicted RBP5.21□□□□□ -1.58
PDGFC-205ENST00000506880 CTAG1AP78358 180 aa5.21□□□□□ -1.58
PDGFC-205ENST00000506880 C1orf137Q5JT78 98 aa5.21□□□□□ -1.58
PDGFC-205ENST00000506880 S100A7L2Q5SY68 101 aa5.21□□□□□ -1.58
PDGFC-205ENST00000506880 FLG2Q5D862 2391 aaPredicted RBP5.2□□□□□ -1.58
PDGFC-205ENST00000506880 A0A0U1RRA0 63 aa5.2□□□□□ -1.58
PDGFC-205ENST00000506880 A4D1N5 150 aa5.2□□□□□ -1.58
PDGFC-205ENST00000506880 KRTAP29-1A8MX34 341 aaPredicted RBP5.2□□□□□ -1.58
PDGFC-205ENST00000506880 DDTP30046 118 aa5.2□□□□□ -1.58
PDGFC-205ENST00000506880 PAM16Q9Y3D7 125 aa5.2□□□□□ -1.58
PDGFC-205ENST00000506880 FAT1Q14517 4588 aa5.2□□□□□ -1.58
PDGFC-205ENST00000506880 HAMPP81172 84 aa5.19□□□□□ -1.58
PDGFC-205ENST00000506880 KRTAP13-1Q8IUC0 172 aa5.19□□□□□ -1.58
PDGFC-205ENST00000506880 ZNF706Q9Y5V0 76 aaPredicted RBP5.19□□□□□ -1.58
PDGFC-205ENST00000506880 SOSTDC1Q6X4U4 206 aa5.18□□□□□ -1.58
PDGFC-205ENST00000506880 DAND5Q8N907 189 aa5.18□□□□□ -1.58
PDGFC-205ENST00000506880 HIST1H4GQ99525 98 aa5.18□□□□□ -1.58
PDGFC-205ENST00000506880 KRTAP4-5Q9BYR2 181 aa5.18□□□□□ -1.58
PDGFC-205ENST00000506880 TTTY13Q9BZ97 58 aa5.18□□□□□ -1.58
PDGFC-205ENST00000506880 UQCR10Q9UDW1 63 aa5.18□□□□□ -1.58
PDGFC-205ENST00000506880 DMBT1Q9UGM3 2413 aaPredicted RBP5.18□□□□□ -1.58
PDGFC-205ENST00000506880 TRAV23DV6A0A075B6W5 121 aa5.17□□□□□ -1.58
PDGFC-205ENST00000506880 TRBV10-3A0A0K0K1G6 114 aa5.17□□□□□ -1.58
PDGFC-205ENST00000506880 ETDCA0A1B0GVM5 59 aa5.17□□□□□ -1.58
PDGFC-205ENST00000506880 KRTAP4-16G5E9R7 235 aaPredicted RBP5.17□□□□□ -1.58
PDGFC-205ENST00000506880 RPL13AP40429 203 aaKnown RBP5.17□□□□□ -1.58
PDGFC-205ENST00000506880 UBE2AP49459 152 aa5.17□□□□□ -1.58
PDGFC-205ENST00000506880 FAM229BQ4G0N7 80 aa5.17□□□□□ -1.58
PDGFC-205ENST00000506880 MUSTN1Q8IVN3 82 aa5.17□□□□□ -1.58
PDGFC-205ENST00000506880 IGKV2-28A0A075B6P5 120 aa5.16□□□□□ -1.58
PDGFC-205ENST00000506880 RPL37AP8A6NKH3 93 aa5.16□□□□□ -1.58
PDGFC-205ENST00000506880 ZNF73O43830 326 aaPredicted RBP5.16□□□□□ -1.58
PDGFC-205ENST00000506880 IGKV2D-28P01615 120 aa5.16□□□□□ -1.58
PDGFC-205ENST00000506880 Q6ZRX8 168 aa5.16□□□□□ -1.58
PDGFC-205ENST00000506880 Q8NDZ9 215 aa5.16□□□□□ -1.58
PDGFC-205ENST00000506880 NHP2Q9NX24 153 aaKnown RBP5.16□□□□□ -1.58
PDGFC-205ENST00000506880 DHRS4-AS1Q9P1J3 65 aa5.16□□□□□ -1.58
PDGFC-205ENST00000506880 A0A0B4J2C4 111 aa5.15□□□□□ -1.59
PDGFC-205ENST00000506880 A0A1B0GWB2 263 aa5.15□□□□□ -1.59
PDGFC-205ENST00000506880 GAGE10A6NGK3 116 aa5.15□□□□□ -1.59
PDGFC-205ENST00000506880 NCR3O14931 201 aa5.15□□□□□ -1.59
PDGFC-205ENST00000506880 HSD52Q0P140 79 aa5.15□□□□□ -1.59
PDGFC-205ENST00000506880 C14orf144Q96I85 54 aa5.15□□□□□ -1.59
PDGFC-205ENST00000506880 LINC01600Q96MT4 127 aa5.15□□□□□ -1.59
PDGFC-205ENST00000506880 KRTAP4-11Q9BYQ6 195 aa5.15□□□□□ -1.59
PDGFC-205ENST00000506880 PKHD1L1Q86WI1 4243 aa5.14□□□□□ -1.59
PDGFC-205ENST00000506880 SNCGO76070 127 aa5.14□□□□□ -1.59
PDGFC-205ENST00000506880 VAMP3Q15836 100 aa5.14□□□□□ -1.59
PDGFC-205ENST00000506880 FAM19A1Q7Z5A9 133 aa5.14□□□□□ -1.59
PDGFC-205ENST00000506880 KRTAP11-1Q8IUC1 163 aa5.14□□□□□ -1.59
PDGFC-205ENST00000506880 CEND1Q8N111 149 aa5.14□□□□□ -1.59
PDGFC-205ENST00000506880 B5MCH6 92 aa5.13□□□□□ -1.59
PDGFC-205ENST00000506880 GHRHP01286 108 aa5.13□□□□□ -1.59
PDGFC-205ENST00000506880 BVES-AS1Q5T3Y7 98 aa5.13□□□□□ -1.59
PDGFC-205ENST00000506880 C2orf91Q6ZV80 131 aa5.13□□□□□ -1.59
PDGFC-205ENST00000506880 OR13C6PQ8NH95 151 aa5.13□□□□□ -1.59
PDGFC-205ENST00000506880 TSTD3H0UI37 97 aa5.12□□□□□ -1.59
PDGFC-205ENST00000506880 EIF4EBP3O60516 100 aaPredicted RBP5.12□□□□□ -1.59
PDGFC-205ENST00000506880 ELOF1P60002 83 aaKnown RBP5.12□□□□□ -1.59
PDGFC-205ENST00000506880 A0A1B0GX51 115 aa5.11□□□□□ -1.59
PDGFC-205ENST00000506880 A6NDN8 102 aa5.11□□□□□ -1.59
PDGFC-205ENST00000506880 H3BQ85 93 aa5.11□□□□□ -1.59
PDGFC-205ENST00000506880 M0R143 59 aa5.11□□□□□ -1.59
PDGFC-205ENST00000506880 NPC2P61916 151 aa5.11□□□□□ -1.59
PDGFC-205ENST00000506880 LOC105371267A0A1B0GV96 52 aa5.1□□□□□ -1.59
PDGFC-205ENST00000506880 H0YGX0 51 aa5.1□□□□□ -1.59
PDGFC-205ENST00000506880 SLC25A20O43772 301 aa5.1□□□□□ -1.59
PDGFC-205ENST00000506880 CRYGAP11844 174 aa5.1□□□□□ -1.59
PDGFC-205ENST00000506880 COX7BP24311 80 aa5.1□□□□□ -1.59
PDGFC-205ENST00000506880 LINC00483Q53H64 154 aa5.1□□□□□ -1.59
PDGFC-205ENST00000506880 PPDPFLQ8WWR9 84 aa5.1□□□□□ -1.59
PDGFC-205ENST00000506880 RAB37Q96AX2 223 aa5.1□□□□□ -1.59
PDGFC-205ENST00000506880 ABCA13Q86UQ4 5058 aa5.1□□□□□ -1.59
PDGFC-205ENST00000506880 KRTAP1-4P0C5Y4 121 aa5.09□□□□□ -1.59
PDGFC-205ENST00000506880 C6orf99Q4VX62 202 aa5.09□□□□□ -1.59
PDGFC-205ENST00000506880 OCIAD2Q56VL3 154 aa5.09□□□□□ -1.59
PDGFC-205ENST00000506880 PRO1854Q9UHT4 67 aa5.09□□□□□ -1.59
PDGFC-205ENST00000506880 MYCBP2O75592 4640 aa5.08□□□□□ -1.6
PDGFC-205ENST00000506880 CFC1BP0CG36 223 aa5.08□□□□□ -1.6
PDGFC-205ENST00000506880 CFC1P0CG37 223 aa5.08□□□□□ -1.6
PDGFC-205ENST00000506880 SPRR1BP22528 89 aa5.08□□□□□ -1.6
PDGFC-205ENST00000506880 KRTAP10-8P60410 259 aa5.08□□□□□ -1.6
PDGFC-205ENST00000506880 SPRR4Q96PI1 79 aa5.08□□□□□ -1.6
PDGFC-205ENST00000506880 HIGD2AQ9BW72 106 aa5.08□□□□□ -1.6
PDGFC-205ENST00000506880 COX6CP09669 75 aa5.07□□□□□ -1.6
PDGFC-205ENST00000506880 PRLHP81277 87 aa5.07□□□□□ -1.6
PDGFC-205ENST00000506880 SMIM11BQ8TCY0 68 aa5.07□□□□□ -1.6
PDGFC-205ENST00000506880 SMCR5Q8TEV8 140 aa5.07□□□□□ -1.6
PDGFC-205ENST00000506880 C12orf57Q99622 126 aa5.07□□□□□ -1.6
PDGFC-205ENST00000506880 SPAG11AQ6PDA7 123 aa5.06□□□□□ -1.6
PDGFC-205ENST00000506880 Q9BRP9 147 aa5.06□□□□□ -1.6
PDGFC-205ENST00000506880 RPS29P62273 56 aaKnown RBP5.05□□□□□ -1.6
PDGFC-205ENST00000506880 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.05□□□□□ -1.6
PDGFC-205ENST00000506880 SSBP3-AS1Q7Z2R9 100 aa5.05□□□□□ -1.6
PDGFC-205ENST00000506880 IGLV5-48A0A075B6I7 105 aa5.04□□□□□ -1.6
PDGFC-205ENST00000506880 TEX49A0A1B0GTD5 131 aa5.04□□□□□ -1.6
PDGFC-205ENST00000506880 MT1HL1P0DM35 61 aa5.04□□□□□ -1.6
PDGFC-205ENST00000506880 FXYD2P54710 66 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms