RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 LGALS3P17931 250 aaKnown RBP5.23□□□□□ -1.57
PDLIM5-209ENST00000506632 SMCR5Q8TEV8 140 aa5.23□□□□□ -1.57
PDLIM5-209ENST00000506632 ZNF706Q9Y5V0 76 aaPredicted RBP5.23□□□□□ -1.57
PDLIM5-209ENST00000506632 ETDCA0A1B0GVM5 59 aa5.22□□□□□ -1.57
PDLIM5-209ENST00000506632 SYS1-DBNDD2H3BUS1 97 aa5.22□□□□□ -1.57
PDLIM5-209ENST00000506632 NDUFC2O95298 119 aa5.22□□□□□ -1.57
PDLIM5-209ENST00000506632 SOSTDC1Q6X4U4 206 aa5.22□□□□□ -1.57
PDLIM5-209ENST00000506632 RETNLBQ9BQ08 111 aa5.22□□□□□ -1.57
PDLIM5-209ENST00000506632 SPANXB1Q9NS25 103 aaPredicted RBP5.22□□□□□ -1.57
PDLIM5-209ENST00000506632 A0A0J9YXY3 114 aa5.21□□□□□ -1.58
PDLIM5-209ENST00000506632 IGLV6-57P01721 117 aa5.21□□□□□ -1.58
PDLIM5-209ENST00000506632 DDTP30046 118 aa5.21□□□□□ -1.58
PDLIM5-209ENST00000506632 LINC00483Q53H64 154 aa5.21□□□□□ -1.58
PDLIM5-209ENST00000506632 ADAMTSL4-AS1Q5T5F5 129 aa5.21□□□□□ -1.58
PDLIM5-209ENST00000506632 LINC01545Q5VT33 79 aa5.21□□□□□ -1.58
PDLIM5-209ENST00000506632 S100A12P80511 92 aa5.2□□□□□ -1.58
PDLIM5-209ENST00000506632 SPAG11AQ6PDA7 123 aa5.2□□□□□ -1.58
PDLIM5-209ENST00000506632 Q6ZRX8 168 aa5.2□□□□□ -1.58
PDLIM5-209ENST00000506632 LITAFQ99732 161 aa5.2□□□□□ -1.58
PDLIM5-209ENST00000506632 Q9BRP9 147 aa5.2□□□□□ -1.58
PDLIM5-209ENST00000506632 MIEN1Q9BRT3 115 aa5.2□□□□□ -1.58
PDLIM5-209ENST00000506632 MUC2Q02817 5179 aa5.2□□□□□ -1.58
PDLIM5-209ENST00000506632 ERC2-IT1O76042 136 aa5.19□□□□□ -1.58
PDLIM5-209ENST00000506632 SNRPEP62304 92 aaKnown RBP5.19□□□□□ -1.58
PDLIM5-209ENST00000506632 TPRXLQ17RH7 258 aa5.19□□□□□ -1.58
PDLIM5-209ENST00000506632 COA6Q5JTJ3 125 aaKnown RBP5.19□□□□□ -1.58
PDLIM5-209ENST00000506632 UBE2V1Q13404 147 aa5.18□□□□□ -1.58
PDLIM5-209ENST00000506632 PPDPFQ9H3Y8 114 aa5.18□□□□□ -1.58
PDLIM5-209ENST00000506632 IGLV7-46A0A075B6I9 117 aa5.17□□□□□ -1.58
PDLIM5-209ENST00000506632 TRAV23DV6A0A075B6W5 121 aa5.17□□□□□ -1.58
PDLIM5-209ENST00000506632 TIMM17BO60830 172 aa5.17□□□□□ -1.58
PDLIM5-209ENST00000506632 C3orf79P0CE67 100 aa5.17□□□□□ -1.58
PDLIM5-209ENST00000506632 NPC2P61916 151 aa5.17□□□□□ -1.58
PDLIM5-209ENST00000506632 S100A7L2Q5SY68 101 aa5.17□□□□□ -1.58
PDLIM5-209ENST00000506632 GAGE2AQ6NT46 116 aa5.17□□□□□ -1.58
PDLIM5-209ENST00000506632 Q8NBF4 154 aa5.17□□□□□ -1.58
PDLIM5-209ENST00000506632 ZNF73O43830 326 aaPredicted RBP5.16□□□□□ -1.58
PDLIM5-209ENST00000506632 LINC00308Q8TCZ7 52 aa5.16□□□□□ -1.58
PDLIM5-209ENST00000506632 SPANXCQ9NY87 97 aa5.16□□□□□ -1.58
PDLIM5-209ENST00000506632 MUC17Q685J3 4493 aa5.15□□□□□ -1.58
PDLIM5-209ENST00000506632 FP248Q71RG6 208 aaPredicted RBP5.15□□□□□ -1.59
PDLIM5-209ENST00000506632 SSBP3-AS1Q7Z2R9 100 aa5.15□□□□□ -1.59
PDLIM5-209ENST00000506632 TTTY13Q9BZ97 58 aa5.15□□□□□ -1.59
PDLIM5-209ENST00000506632 ZNF815PA8K554 130 aa5.14□□□□□ -1.59
PDLIM5-209ENST00000506632 SPINK1P00995 79 aa5.14□□□□□ -1.59
PDLIM5-209ENST00000506632 MOBPQ13875 183 aa5.14□□□□□ -1.59
PDLIM5-209ENST00000506632 JOSD1Q15040 202 aaPredicted RBP5.14□□□□□ -1.59
PDLIM5-209ENST00000506632 IGLV9-49A0A0B4J1Y8 123 aa5.13□□□□□ -1.59
PDLIM5-209ENST00000506632 RPS29P62273 56 aaKnown RBP5.13□□□□□ -1.59
PDLIM5-209ENST00000506632 CBY1Q9Y3M2 126 aa5.13□□□□□ -1.59
PDLIM5-209ENST00000506632 KRTDAPP60985 99 aa5.12□□□□□ -1.59
PDLIM5-209ENST00000506632 SPANXDQ9BXN6 97 aa5.12□□□□□ -1.59
PDLIM5-209ENST00000506632 SPRR1BP22528 89 aa5.11□□□□□ -1.59
PDLIM5-209ENST00000506632 KRTAP13-3Q3SY46 172 aa5.11□□□□□ -1.59
PDLIM5-209ENST00000506632 Q8N377 158 aa5.11□□□□□ -1.59
PDLIM5-209ENST00000506632 ST20-AS1Q8NBB2 130 aa5.11□□□□□ -1.59
PDLIM5-209ENST00000506632 A0A0U1RQV1 116 aa5.1□□□□□ -1.59
PDLIM5-209ENST00000506632 C20orf202A1L168 122 aa5.1□□□□□ -1.59
PDLIM5-209ENST00000506632 HINT1P49773 126 aaPredicted RBP5.1□□□□□ -1.59
PDLIM5-209ENST00000506632 LINC00518Q8N0U6 118 aa5.1□□□□□ -1.59
PDLIM5-209ENST00000506632 OR13C6PQ8NH95 151 aa5.1□□□□□ -1.59
PDLIM5-209ENST00000506632 ELOF1P60002 83 aaKnown RBP5.09□□□□□ -1.59
PDLIM5-209ENST00000506632 DHRS4-AS1Q9P1J3 65 aa5.09□□□□□ -1.59
PDLIM5-209ENST00000506632 PAM16Q9Y3D7 125 aa5.09□□□□□ -1.59
PDLIM5-209ENST00000506632 SLC25A20O43772 301 aa5.08□□□□□ -1.6
PDLIM5-209ENST00000506632 IFITM1P13164 125 aa5.08□□□□□ -1.6
PDLIM5-209ENST00000506632 SCGB1D4Q6XE38 83 aa5.08□□□□□ -1.6
PDLIM5-209ENST00000506632 ATOH7Q8N100 152 aa5.08□□□□□ -1.6
PDLIM5-209ENST00000506632 TRBV7-6A0A0J9YX20 115 aa5.07□□□□□ -1.6
PDLIM5-209ENST00000506632 COX7BP24311 80 aa5.07□□□□□ -1.6
PDLIM5-209ENST00000506632 AKR1D1P51857 326 aa5.07□□□□□ -1.6
PDLIM5-209ENST00000506632 C6orf99Q4VX62 202 aa5.07□□□□□ -1.6
PDLIM5-209ENST00000506632 C9orf153Q5TBE3 101 aa5.07□□□□□ -1.6
PDLIM5-209ENST00000506632 Q6ZVH6 145 aa5.07□□□□□ -1.6
PDLIM5-209ENST00000506632 PCP2Q8IVA1 136 aa5.07□□□□□ -1.6
PDLIM5-209ENST00000506632 COPS9Q8WXC6 57 aa5.06□□□□□ -1.6
PDLIM5-209ENST00000506632 ASB16-AS1Q495Z4 193 aa5.05□□□□□ -1.6
PDLIM5-209ENST00000506632 SLC25A34Q6PIV7 304 aa5.05□□□□□ -1.6
PDLIM5-209ENST00000506632 MUSTN1Q8IVN3 82 aa5.05□□□□□ -1.6
PDLIM5-209ENST00000506632 HIST3H2BBQ8N257 126 aa5.05□□□□□ -1.6
PDLIM5-209ENST00000506632 FAT4Q6V0I7 4981 aa5.04□□□□□ -1.6
PDLIM5-209ENST00000506632 A0A1B0GWB2 263 aa5.04□□□□□ -1.6
PDLIM5-209ENST00000506632 SEC61BP60468 96 aaKnown RBP5.04□□□□□ -1.6
PDLIM5-209ENST00000506632 HIST1H2BLQ99880 126 aa5.04□□□□□ -1.6
PDLIM5-209ENST00000506632 LINC01547P58512 204 aaPredicted RBP5.03□□□□□ -1.6
PDLIM5-209ENST00000506632 Q75L30 129 aa5.03□□□□□ -1.6
PDLIM5-209ENST00000506632 SMIM29Q86T20 159 aa5.03□□□□□ -1.6
PDLIM5-209ENST00000506632 LAMTOR3Q9UHA4 124 aa5.03□□□□□ -1.6
PDLIM5-209ENST00000506632 IGLV5-48A0A075B6I7 105 aa5.02□□□□□ -1.61
PDLIM5-209ENST00000506632 TEX49A0A1B0GTD5 131 aa5.02□□□□□ -1.61
PDLIM5-209ENST00000506632 A6NDN8 102 aa5.02□□□□□ -1.61
PDLIM5-209ENST00000506632 XP32Q5T750 250 aa5.02□□□□□ -1.61
PDLIM5-209ENST00000506632 TRAV13-2A0A0B4J235 113 aa5.01□□□□□ -1.61
PDLIM5-209ENST00000506632 S100A1P23297 94 aa5.01□□□□□ -1.61
PDLIM5-209ENST00000506632 CD164Q04900 197 aa5.01□□□□□ -1.61
PDLIM5-209ENST00000506632 TAL2Q16559 108 aa5.01□□□□□ -1.61
PDLIM5-209ENST00000506632 Q1RN00 199 aa5.01□□□□□ -1.61
PDLIM5-209ENST00000506632 SMIM11BQ8TCY0 68 aa5.01□□□□□ -1.61
PDLIM5-209ENST00000506632 LIMD2Q9BT23 127 aa5.01□□□□□ -1.61
PDLIM5-209ENST00000506632 KRTAP4-1Q9BYQ7 146 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms