RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 FAM229BQ4G0N7 80 aa10.63□□□□□ -0.71
SCLT1-208ENST00000506368 M0R378 163 aa10.62□□□□□ -0.71
SCLT1-208ENST00000506368 KRTAP10-3P60369 221 aa10.62□□□□□ -0.71
SCLT1-208ENST00000506368 LINC00528Q8N1L1 170 aa10.62□□□□□ -0.71
SCLT1-208ENST00000506368 MPLKIPQ8TAP9 179 aa10.62□□□□□ -0.71
SCLT1-208ENST00000506368 PRR34Q9NV39 138 aa10.62□□□□□ -0.71
SCLT1-208ENST00000506368 PRR15Q8IV56 129 aa10.61□□□□□ -0.71
SCLT1-208ENST00000506368 Q1T7F1 81 aa10.61□□□□□ -0.71
SCLT1-208ENST00000506368 X6R8D5 127 aa10.6□□□□□ -0.71
SCLT1-208ENST00000506368 A0A096LPF7 62 aa10.59□□□□□ -0.71
SCLT1-208ENST00000506368 hDV103S1A0JD37 113 aa10.59□□□□□ -0.71
SCLT1-208ENST00000506368 LELP1Q5T871 98 aa10.59□□□□□ -0.71
SCLT1-208ENST00000506368 C6orf48Q9UBA6 75 aa10.59□□□□□ -0.71
SCLT1-208ENST00000506368 VPREB1P12018 145 aa10.59□□□□□ -0.71
SCLT1-208ENST00000506368 SEC61GP60059 68 aa10.58□□□□□ -0.72
SCLT1-208ENST00000506368 TRRAPQ9Y4A5 3859 aa10.58□□□□□ -0.72
SCLT1-208ENST00000506368 VWFP04275 2813 aa10.57□□□□□ -0.72
SCLT1-208ENST00000506368 HIGD2AQ9BW72 106 aa10.56□□□□□ -0.72
SCLT1-208ENST00000506368 IGLV5-48A0A075B6I7 105 aa10.56□□□□□ -0.72
SCLT1-208ENST00000506368 EGFEM1PQ0D2K5 195 aa10.56□□□□□ -0.72
SCLT1-208ENST00000506368 Q6ZRU5 148 aa10.54□□□□□ -0.72
SCLT1-208ENST00000506368 XAGE1AQ9HD64 81 aa10.54□□□□□ -0.72
SCLT1-208ENST00000506368 DNHD1Q96M86 4753 aa10.54□□□□□ -0.72
SCLT1-208ENST00000506368 Q8N9L7 120 aa10.54□□□□□ -0.72
SCLT1-208ENST00000506368 ANK2Q01484 3957 aa10.53□□□□□ -0.72
SCLT1-208ENST00000506368 CYP4F30PQ9H0H9 118 aa10.52□□□□□ -0.73
SCLT1-208ENST00000506368 WNK1Q9H4A3 2382 aa10.52□□□□□ -0.73
SCLT1-208ENST00000506368 ZCCHC13Q8WW36 166 aaKnown RBP10.51□□□□□ -0.73
SCLT1-208ENST00000506368 NOTCH3Q9UM47 2321 aa10.51□□□□□ -0.73
SCLT1-208ENST00000506368 DAD1P61803 113 aa10.49□□□□□ -0.73
SCLT1-208ENST00000506368 CAMK2N2Q96S95 79 aa10.49□□□□□ -0.73
SCLT1-208ENST00000506368 PKD1L1Q8TDX9 2849 aa10.49□□□□□ -0.73
SCLT1-208ENST00000506368 NDUFB1O75438 58 aa10.49□□□□□ -0.73
SCLT1-208ENST00000506368 KPRPQ5T749 579 aaPredicted RBP10.49□□□□□ -0.73
SCLT1-208ENST00000506368 SMIM29Q86T20 159 aa10.49□□□□□ -0.73
SCLT1-208ENST00000506368 KLK12Q9UKR0 248 aa10.49□□□□□ -0.73
SCLT1-208ENST00000506368 ETDCA0A1B0GVM5 59 aa10.48□□□□□ -0.73
SCLT1-208ENST00000506368 PMAIP1Q13794 54 aa10.48□□□□□ -0.73
SCLT1-208ENST00000506368 C3orf84H3BNL1 204 aa10.47□□□□□ -0.73
SCLT1-208ENST00000506368 C1orf64Q8NEQ6 169 aa10.46□□□□□ -0.73
SCLT1-208ENST00000506368 KCNQ1DNQ9H478 68 aa10.46□□□□□ -0.73
SCLT1-208ENST00000506368 FAM30AQ9NZY2 134 aa10.46□□□□□ -0.74
SCLT1-208ENST00000506368 DHRS4-AS1Q9P1J3 65 aa10.46□□□□□ -0.74
SCLT1-208ENST00000506368 CMYA5Q8N3K9 4069 aa10.45□□□□□ -0.74
SCLT1-208ENST00000506368 KRTAP21-3Q3LHN1 58 aa10.45□□□□□ -0.74
SCLT1-208ENST00000506368 Q6ZRP5 223 aa10.45□□□□□ -0.74
SCLT1-208ENST00000506368 APOC4P55056 127 aa10.43□□□□□ -0.74
SCLT1-208ENST00000506368 Q8N377 158 aa10.43□□□□□ -0.74
SCLT1-208ENST00000506368 SPRR4Q96PI1 79 aa10.43□□□□□ -0.74
SCLT1-208ENST00000506368 Q8NBF4 154 aa10.42□□□□□ -0.74
SCLT1-208ENST00000506368 SPART-AS1P0CW21 52 aa10.4□□□□□ -0.74
SCLT1-208ENST00000506368 TNP2Q05952 138 aa10.4□□□□□ -0.74
SCLT1-208ENST00000506368 A0A1W2PNM2 257 aa10.38□□□□□ -0.75
SCLT1-208ENST00000506368 C1orf137Q5JT78 98 aa10.38□□□□□ -0.75
SCLT1-208ENST00000506368 NKAPP1Q8N9T2 125 aa10.38□□□□□ -0.75
SCLT1-208ENST00000506368 PLA2G2DQ9UNK4 145 aa10.38□□□□□ -0.75
SCLT1-208ENST00000506368 TRAV22A0A0B4J277 110 aa10.37□□□□□ -0.75
SCLT1-208ENST00000506368 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.37□□□□□ -0.75
SCLT1-208ENST00000506368 HCG22E2RYF7 251 aa10.35□□□□□ -0.75
SCLT1-208ENST00000506368 DSCR10P59022 87 aa10.35□□□□□ -0.75
SCLT1-208ENST00000506368 KRTAP26-1Q6PEX3 210 aa10.35□□□□□ -0.75
SCLT1-208ENST00000506368 Q6ZRX8 168 aa10.35□□□□□ -0.75
SCLT1-208ENST00000506368 Q8NAQ8 132 aa10.35□□□□□ -0.75
SCLT1-208ENST00000506368 H3BNG1 76 aa10.35□□□□□ -0.75
SCLT1-208ENST00000506368 PSCAO43653 123 aa10.35□□□□□ -0.75
SCLT1-208ENST00000506368 DEFB135Q30KP9 77 aa10.35□□□□□ -0.75
SCLT1-208ENST00000506368 C15orf56Q8N910 161 aa10.34□□□□□ -0.75
SCLT1-208ENST00000506368 DEFB105AQ8NG35 78 aa10.34□□□□□ -0.75
SCLT1-208ENST00000506368 H3BPC8 53 aa10.34□□□□□ -0.75
SCLT1-208ENST00000506368 MP68P56378 58 aa10.34□□□□□ -0.75
SCLT1-208ENST00000506368 SPANXA2-OT1Q8N9U9 137 aa10.33□□□□□ -0.76
SCLT1-208ENST00000506368 TLX1NBP0CAT3 122 aa10.31□□□□□ -0.76
SCLT1-208ENST00000506368 SPRR1AP35321 89 aa10.31□□□□□ -0.76
SCLT1-208ENST00000506368 C7orf33Q8WU49 177 aa10.31□□□□□ -0.76
SCLT1-208ENST00000506368 IGLV5-37A0A075B6J1 123 aa10.3□□□□□ -0.76
SCLT1-208ENST00000506368 DEFB4AO15263 64 aa10.3□□□□□ -0.76
SCLT1-208ENST00000506368 MGAM2Q2M2H8 2515 aa10.3□□□□□ -0.76
SCLT1-208ENST00000506368 K7EQZ3 153 aa10.3□□□□□ -0.76
SCLT1-208ENST00000506368 SYCNQ0VAF6 134 aa10.3□□□□□ -0.76
SCLT1-208ENST00000506368 KRTAP4-16G5E9R7 235 aaPredicted RBP10.29□□□□□ -0.76
SCLT1-208ENST00000506368 UBE2BP63146 152 aa10.29□□□□□ -0.76
SCLT1-208ENST00000506368 LIMD2Q9BT23 127 aa10.29□□□□□ -0.76
SCLT1-208ENST00000506368 PSPHP1O15172 72 aa10.29□□□□□ -0.76
SCLT1-208ENST00000506368 HTN3P15516 51 aa10.29□□□□□ -0.76
SCLT1-208ENST00000506368 CD164Q04900 197 aa10.29□□□□□ -0.76
SCLT1-208ENST00000506368 LRCOL1A6NCL2 159 aa10.28□□□□□ -0.76
SCLT1-208ENST00000506368 NOTCH1P46531 2555 aa10.27□□□□□ -0.76
SCLT1-208ENST00000506368 OXLD1Q5BKU9 147 aa10.27□□□□□ -0.76
SCLT1-208ENST00000506368 B9D2Q9BPU9 175 aa10.27□□□□□ -0.76
SCLT1-208ENST00000506368 NBEAL1Q6ZS30 2694 aa10.27□□□□□ -0.77
SCLT1-208ENST00000506368 UBE2AP49459 152 aa10.26□□□□□ -0.77
SCLT1-208ENST00000506368 MRPL55Q7Z7F7 128 aaKnown RBP10.26□□□□□ -0.77
SCLT1-208ENST00000506368 Q9BRP9 147 aa10.26□□□□□ -0.77
SCLT1-208ENST00000506368 IGLV1-50A0A075B6I6 118 aa10.24□□□□□ -0.77
SCLT1-208ENST00000506368 ST20-AS1Q8NBB2 130 aa10.24□□□□□ -0.77
SCLT1-208ENST00000506368 WFDC10BQ8IUB3 73 aa10.24□□□□□ -0.77
SCLT1-208ENST00000506368 SERTAD4-AS1Q5TG53 156 aa10.23□□□□□ -0.77
SCLT1-208ENST00000506368 A8MUN3 132 aa10.22□□□□□ -0.77
SCLT1-208ENST00000506368 Q5VV11 94 aa10.22□□□□□ -0.77
SCLT1-208ENST00000506368 LINC00208Q96KT6 92 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms