RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 H3BUT2 72 aa3.11□□□□□ -1.91
DEPDC1B-203ENST00000505017 K7ERJ3 54 aa3.11□□□□□ -1.91
DEPDC1B-203ENST00000505017 TSPAN13O95857 204 aa3.11□□□□□ -1.91
DEPDC1B-203ENST00000505017 PFN2P35080 140 aa3.11□□□□□ -1.91
DEPDC1B-203ENST00000505017 C2orf82Q6UX34 121 aa3.11□□□□□ -1.91
DEPDC1B-203ENST00000505017 SOSTDC1Q6X4U4 206 aa3.11□□□□□ -1.91
DEPDC1B-203ENST00000505017 DAND5Q8N907 189 aa3.11□□□□□ -1.91
DEPDC1B-203ENST00000505017 CAMK2N2Q96S95 79 aa3.11□□□□□ -1.91
DEPDC1B-203ENST00000505017 SND1-IT1Q9HBX3 110 aa3.11□□□□□ -1.91
DEPDC1B-203ENST00000505017 PKIGQ9Y2B9 76 aa3.11□□□□□ -1.91
DEPDC1B-203ENST00000505017 MEGF8Q7Z7M0 2845 aa3.11□□□□□ -1.91
DEPDC1B-203ENST00000505017 TRBV10-2A0A0K0K1G8 114 aa3.1□□□□□ -1.91
DEPDC1B-203ENST00000505017 A0A0U1RRA0 63 aa3.1□□□□□ -1.91
DEPDC1B-203ENST00000505017 NBDYA0A0U1RRE5 68 aa3.1□□□□□ -1.91
DEPDC1B-203ENST00000505017 NDUFC2-KCTD14E9PQ53 114 aa3.1□□□□□ -1.91
DEPDC1B-203ENST00000505017 C3orf84H3BNL1 204 aa3.1□□□□□ -1.91
DEPDC1B-203ENST00000505017 K7EP34 96 aa3.1□□□□□ -1.91
DEPDC1B-203ENST00000505017 COX6CP09669 75 aa3.1□□□□□ -1.91
DEPDC1B-203ENST00000505017 TLX1NBP0CAT3 122 aa3.1□□□□□ -1.91
DEPDC1B-203ENST00000505017 SYCNQ0VAF6 134 aa3.1□□□□□ -1.91
DEPDC1B-203ENST00000505017 UNQ6190/PRO20217Q6UXQ8 127 aa3.1□□□□□ -1.91
DEPDC1B-203ENST00000505017 CARD19Q96LW7 228 aa3.1□□□□□ -1.91
DEPDC1B-203ENST00000505017 C6orf48Q9UBA6 75 aa3.1□□□□□ -1.91
DEPDC1B-203ENST00000505017 CBY1Q9Y3M2 126 aa3.1□□□□□ -1.91
DEPDC1B-203ENST00000505017 SPCS1Q9Y6A9 102 aa3.1□□□□□ -1.91
DEPDC1B-203ENST00000505017 PLECQ15149 4684 aaKnown RBP3.1□□□□□ -1.91
DEPDC1B-203ENST00000505017 VPS13DQ5THJ4 4388 aa3.09□□□□□ -1.91
DEPDC1B-203ENST00000505017 DNAH6Q9C0G6 4158 aa3.09□□□□□ -1.91
DEPDC1B-203ENST00000505017 PSCAO43653 123 aa3.09□□□□□ -1.91
DEPDC1B-203ENST00000505017 RPL13AP40429 203 aaKnown RBP3.09□□□□□ -1.91
DEPDC1B-203ENST00000505017 NPC2P61916 151 aa3.09□□□□□ -1.91
DEPDC1B-203ENST00000505017 Q6ZRU5 148 aa3.09□□□□□ -1.91
DEPDC1B-203ENST00000505017 C6orf223Q8N319 242 aa3.09□□□□□ -1.91
DEPDC1B-203ENST00000505017 DNAH1Q9P2D7 4330 aa3.09□□□□□ -1.91
DEPDC1B-203ENST00000505017 FBN3Q75N90 2809 aa3.09□□□□□ -1.92
DEPDC1B-203ENST00000505017 IGKV2-28A0A075B6P5 120 aa3.08□□□□□ -1.92
DEPDC1B-203ENST00000505017 IGKV2D-28P01615 120 aa3.08□□□□□ -1.92
DEPDC1B-203ENST00000505017 SCGB1C2P0DMR2 95 aa3.08□□□□□ -1.92
DEPDC1B-203ENST00000505017 RPL28P46779 137 aaKnown RBP3.08□□□□□ -1.92
DEPDC1B-203ENST00000505017 PSMB2P49721 201 aa3.08□□□□□ -1.92
DEPDC1B-203ENST00000505017 CNBPP62633 177 aaKnown RBP3.08□□□□□ -1.92
DEPDC1B-203ENST00000505017 C9orf116Q5BN46 136 aaPredicted RBP3.08□□□□□ -1.92
DEPDC1B-203ENST00000505017 TMEM126AQ9H061 195 aa3.08□□□□□ -1.92
DEPDC1B-203ENST00000505017 CSMD3Q7Z407 3707 aa3.07□□□□□ -1.92
DEPDC1B-203ENST00000505017 STARD9Q9P2P6 4700 aa3.07□□□□□ -1.92
DEPDC1B-203ENST00000505017 LOC107984640A0A0U1RRK4 108 aa3.07□□□□□ -1.92
DEPDC1B-203ENST00000505017 H0YGX0 51 aa3.07□□□□□ -1.92
DEPDC1B-203ENST00000505017 M0QXV9 152 aa3.07□□□□□ -1.92
DEPDC1B-203ENST00000505017 ATXN8Q156A1 80 aa3.07□□□□□ -1.92
DEPDC1B-203ENST00000505017 LINC00337Q8N6G1 96 aa3.07□□□□□ -1.92
DEPDC1B-203ENST00000505017 LINC00526Q96FQ7 95 aa3.07□□□□□ -1.92
DEPDC1B-203ENST00000505017 NAA38Q9BRA0 125 aaKnown RBP3.07□□□□□ -1.92
DEPDC1B-203ENST00000505017 A0A1B0GX51 115 aa3.06□□□□□ -1.92
DEPDC1B-203ENST00000505017 F8W1H4 67 aa3.06□□□□□ -1.92
DEPDC1B-203ENST00000505017 H7C2G1 150 aa3.06□□□□□ -1.92
DEPDC1B-203ENST00000505017 M0R378 163 aa3.06□□□□□ -1.92
DEPDC1B-203ENST00000505017 CASC10Q5T4H9 136 aa3.06□□□□□ -1.92
DEPDC1B-203ENST00000505017 Q6ZRN7 208 aaPredicted RBP3.06□□□□□ -1.92
DEPDC1B-203ENST00000505017 LINC01600Q96MT4 127 aa3.06□□□□□ -1.92
DEPDC1B-203ENST00000505017 ALMS1Q8TCU4 4167 aa3.06□□□□□ -1.92
DEPDC1B-203ENST00000505017 TENM2Q9NT68 2774 aa3.05□□□□□ -1.92
DEPDC1B-203ENST00000505017 TRBV7-6A0A0J9YX20 115 aa3.05□□□□□ -1.92
DEPDC1B-203ENST00000505017 LRCOL1A6NCL2 159 aa3.05□□□□□ -1.92
DEPDC1B-203ENST00000505017 LST1O00453 97 aa3.05□□□□□ -1.92
DEPDC1B-203ENST00000505017 SNCGO76070 127 aa3.05□□□□□ -1.92
DEPDC1B-203ENST00000505017 TCL1BO95988 128 aa3.05□□□□□ -1.92
DEPDC1B-203ENST00000505017 IGLV6-57P01721 117 aa3.05□□□□□ -1.92
DEPDC1B-203ENST00000505017 TRACP01848 142 aa3.05□□□□□ -1.92
DEPDC1B-203ENST00000505017 S100A7L2Q5SY68 101 aa3.05□□□□□ -1.92
DEPDC1B-203ENST00000505017 OR13C6PQ8NH95 151 aa3.05□□□□□ -1.92
DEPDC1B-203ENST00000505017 SMIM11BQ8TCY0 68 aa3.05□□□□□ -1.92
DEPDC1B-203ENST00000505017 DHRS4-AS1Q9P1J3 65 aa3.05□□□□□ -1.92
DEPDC1B-203ENST00000505017 C16orf90A8MZG2 172 aa3.04□□□□□ -1.92
DEPDC1B-203ENST00000505017 H3BMG7 143 aa3.04□□□□□ -1.92
DEPDC1B-203ENST00000505017 H3BT86 120 aa3.04□□□□□ -1.92
DEPDC1B-203ENST00000505017 RPL18AQ02543 176 aaKnown RBP3.04□□□□□ -1.92
DEPDC1B-203ENST00000505017 LINC01620Q4KN68 170 aa3.04□□□□□ -1.92
DEPDC1B-203ENST00000505017 C1orf134Q5TEV5 83 aa3.04□□□□□ -1.92
DEPDC1B-203ENST00000505017 PP632Q6XCG6 107 aa3.04□□□□□ -1.92
DEPDC1B-203ENST00000505017 C9orf163Q8N9P6 203 aa3.04□□□□□ -1.92
DEPDC1B-203ENST00000505017 NKAPP1Q8N9T2 125 aa3.04□□□□□ -1.92
DEPDC1B-203ENST00000505017 XAGE1AQ9HD64 81 aa3.04□□□□□ -1.92
DEPDC1B-203ENST00000505017 LINC00474Q9P2X8 69 aa3.04□□□□□ -1.92
DEPDC1B-203ENST00000505017 A0A087WTM6 91 aa3.03□□□□□ -1.92
DEPDC1B-203ENST00000505017 H3BQ85 93 aa3.03□□□□□ -1.92
DEPDC1B-203ENST00000505017 NCR3O14931 201 aa3.03□□□□□ -1.92
DEPDC1B-203ENST00000505017 LECT2O14960 151 aa3.03□□□□□ -1.92
DEPDC1B-203ENST00000505017 WFDC2Q14508 124 aa3.03□□□□□ -1.92
DEPDC1B-203ENST00000505017 C9orf129Q5T035 196 aaKnown RBP3.03□□□□□ -1.92
DEPDC1B-203ENST00000505017 Q8N814 137 aa3.03□□□□□ -1.92
DEPDC1B-203ENST00000505017 LYSTQ99698 3801 aa3.03□□□□□ -1.92
DEPDC1B-203ENST00000505017 TGP01266 2768 aa3.02□□□□□ -1.93
DEPDC1B-203ENST00000505017 TRAV23DV6A0A075B6W5 121 aa3.02□□□□□ -1.93
DEPDC1B-203ENST00000505017 TRBV10-3A0A0K0K1G6 114 aa3.02□□□□□ -1.93
DEPDC1B-203ENST00000505017 C9JAW5 83 aa3.02□□□□□ -1.93
DEPDC1B-203ENST00000505017 H0Y9J4 135 aa3.02□□□□□ -1.93
DEPDC1B-203ENST00000505017 SLC25A20O43772 301 aa3.02□□□□□ -1.93
DEPDC1B-203ENST00000505017 LY6G6CO95867 125 aa3.02□□□□□ -1.93
DEPDC1B-203ENST00000505017 DNAL4O96015 105 aa3.02□□□□□ -1.93
DEPDC1B-203ENST00000505017 Q6ZVQ6 151 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms