RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 SMCR5Q8TEV8 140 aa9.38□□□□□ -0.91
TCOF1-207ENST00000504761 Q9BRP9 147 aa9.38□□□□□ -0.91
TCOF1-207ENST00000504761 TENM4Q6N022 2769 aa9.38□□□□□ -0.91
TCOF1-207ENST00000504761 FAM240AA0A1B0GVK7 77 aa9.37□□□□□ -0.91
TCOF1-207ENST00000504761 CASC10Q5T4H9 136 aa9.37□□□□□ -0.91
TCOF1-207ENST00000504761 DEFB116Q30KQ4 102 aa9.37□□□□□ -0.91
TCOF1-207ENST00000504761 ZNF706Q9Y5V0 76 aaPredicted RBP9.37□□□□□ -0.91
TCOF1-207ENST00000504761 C15orf56Q8N910 161 aa9.37□□□□□ -0.91
TCOF1-207ENST00000504761 FAM104AQ969W3 186 aa9.37□□□□□ -0.91
TCOF1-207ENST00000504761 A0A087WSZ3 146 aa9.35□□□□□ -0.91
TCOF1-207ENST00000504761 VPREB1P12018 145 aa9.35□□□□□ -0.91
TCOF1-207ENST00000504761 SERTAD4-AS1Q5TG53 156 aa9.35□□□□□ -0.91
TCOF1-207ENST00000504761 CIRBP-AS1Q8TBR5 109 aa9.35□□□□□ -0.91
TCOF1-207ENST00000504761 STAB2Q8WWQ8 2551 aa9.33□□□□□ -0.92
TCOF1-207ENST00000504761 WIPF1O43516 503 aa9.33□□□□□ -0.92
TCOF1-207ENST00000504761 CDIP1Q9H305 208 aa9.33□□□□□ -0.92
TCOF1-207ENST00000504761 WWC2-AS2Q96NR7 200 aa9.32□□□□□ -0.92
TCOF1-207ENST00000504761 Q6JHZ5 121 aa9.32□□□□□ -0.92
TCOF1-207ENST00000504761 ST20-AS1Q8NBB2 130 aa9.31□□□□□ -0.92
TCOF1-207ENST00000504761 IMUPQ9GZP8 106 aa9.31□□□□□ -0.92
TCOF1-207ENST00000504761 IGKV4-1P06312 121 aa9.31□□□□□ -0.92
TCOF1-207ENST00000504761 RTL8CO15255 209 aa9.31□□□□□ -0.92
TCOF1-207ENST00000504761 ELOF1P60002 83 aaKnown RBP9.31□□□□□ -0.92
TCOF1-207ENST00000504761 C16orf90A8MZG2 172 aa9.3□□□□□ -0.92
TCOF1-207ENST00000504761 SMIM20Q8N5G0 67 aa9.3□□□□□ -0.92
TCOF1-207ENST00000504761 Q6ZVQ6 151 aa9.29□□□□□ -0.92
TCOF1-207ENST00000504761 UQCRQO14949 82 aa9.29□□□□□ -0.92
TCOF1-207ENST00000504761 Q8N9L7 120 aa9.29□□□□□ -0.92
TCOF1-207ENST00000504761 SNURFQ9Y675 71 aa9.29□□□□□ -0.92
TCOF1-207ENST00000504761 IGLV6-57P01721 117 aa9.28□□□□□ -0.92
TCOF1-207ENST00000504761 Q6ZRX8 168 aa9.27□□□□□ -0.92
TCOF1-207ENST00000504761 CCDC179H3BU77 68 aa9.27□□□□□ -0.93
TCOF1-207ENST00000504761 CELSR1Q9NYQ6 3014 aa9.27□□□□□ -0.93
TCOF1-207ENST00000504761 C9orf129Q5T035 196 aaKnown RBP9.25□□□□□ -0.93
TCOF1-207ENST00000504761 APLNQ9ULZ1 77 aa9.25□□□□□ -0.93
TCOF1-207ENST00000504761 SERP2Q8N6R1 65 aa9.25□□□□□ -0.93
TCOF1-207ENST00000504761 FAM30AQ9NZY2 134 aa9.25□□□□□ -0.93
TCOF1-207ENST00000504761 EPM2AB3EWF7 344 aa9.24□□□□□ -0.93
TCOF1-207ENST00000504761 LINC01547P58512 204 aaPredicted RBP9.22□□□□□ -0.93
TCOF1-207ENST00000504761 PRR4Q16378 134 aa9.22□□□□□ -0.93
TCOF1-207ENST00000504761 CSMD1Q96PZ7 3565 aa9.21□□□□□ -0.94
TCOF1-207ENST00000504761 Q6Q795 121 aa9.2□□□□□ -0.94
TCOF1-207ENST00000504761 SVEP1Q4LDE5 3571 aa9.2□□□□□ -0.94
TCOF1-207ENST00000504761 TRBV7-6A0A0J9YX20 115 aa9.2□□□□□ -0.94
TCOF1-207ENST00000504761 IGHV6-1A0A0B4J1U7 121 aa9.19□□□□□ -0.94
TCOF1-207ENST00000504761 COX7CP15954 63 aa9.19□□□□□ -0.94
TCOF1-207ENST00000504761 MOBPQ13875 183 aa9.19□□□□□ -0.94
TCOF1-207ENST00000504761 IGLV1-50A0A075B6I6 118 aa9.19□□□□□ -0.94
TCOF1-207ENST00000504761 A0A087WTM6 91 aa9.17□□□□□ -0.94
TCOF1-207ENST00000504761 Q6ZQT0 140 aa9.17□□□□□ -0.94
TCOF1-207ENST00000504761 LINC00528Q8N1L1 170 aa9.17□□□□□ -0.94
TCOF1-207ENST00000504761 LINC00476Q8WZB0 136 aa9.17□□□□□ -0.94
TCOF1-207ENST00000504761 KCNQ1DNQ9H478 68 aa9.17□□□□□ -0.94
TCOF1-207ENST00000504761 C9orf163Q8N9P6 203 aa9.16□□□□□ -0.94
TCOF1-207ENST00000504761 A0A1W2PNN7 141 aa9.15□□□□□ -0.94
TCOF1-207ENST00000504761 A0A0G2JQZ4 141 aa9.14□□□□□ -0.95
TCOF1-207ENST00000504761 CHKB-CPT1BH3BT56 60 aa9.13□□□□□ -0.95
TCOF1-207ENST00000504761 TMEM258P61165 79 aa9.13□□□□□ -0.95
TCOF1-207ENST00000504761 BCE1O60756 84 aa9.12□□□□□ -0.95
TCOF1-207ENST00000504761 Q8NBF4 154 aa9.11□□□□□ -0.95
TCOF1-207ENST00000504761 FAM236DA0A1B0GTK5 79 aa9.11□□□□□ -0.95
TCOF1-207ENST00000504761 FAM236CP0DP71 79 aa9.11□□□□□ -0.95
TCOF1-207ENST00000504761 CASC2Q6XLA1 102 aa9.11□□□□□ -0.95
TCOF1-207ENST00000504761 LINC00208Q96KT6 92 aa9.11□□□□□ -0.95
TCOF1-207ENST00000504761 J3KT08 172 aa9.1□□□□□ -0.95
TCOF1-207ENST00000504761 TRBV7-7A0A0K0K1E9 115 aa9.1□□□□□ -0.95
TCOF1-207ENST00000504761 SPENQ96T58 3664 aaKnown RBP9.1□□□□□ -0.95
TCOF1-207ENST00000504761 RETNLBQ9BQ08 111 aa9.1□□□□□ -0.95
TCOF1-207ENST00000504761 TRAV7A0A075B6U4 112 aa9.09□□□□□ -0.95
TCOF1-207ENST00000504761 C5orf47Q569G3 176 aa9.09□□□□□ -0.95
TCOF1-207ENST00000504761 TLX1NBP0CAT3 122 aa9.09□□□□□ -0.95
TCOF1-207ENST00000504761 CUBNO60494 3623 aa9.09□□□□□ -0.95
TCOF1-207ENST00000504761 OTOGQ6ZRI0 2925 aa9.09□□□□□ -0.95
TCOF1-207ENST00000504761 ERC2-IT1O76042 136 aa9.08□□□□□ -0.96
TCOF1-207ENST00000504761 TENM1Q9UKZ4 2725 aa9.08□□□□□ -0.96
TCOF1-207ENST00000504761 LOC110117498A0A087WWA1 95 aa9.07□□□□□ -0.96
TCOF1-207ENST00000504761 Q8N377 158 aa9.07□□□□□ -0.96
TCOF1-207ENST00000504761 NBPF19A0A087WUL8 3843 aa9.07□□□□□ -0.96
TCOF1-207ENST00000504761 SPACA4Q8TDM5 124 aa9.07□□□□□ -0.96
TCOF1-207ENST00000504761 ANAPC11Q9NYG5 84 aa9.07□□□□□ -0.96
TCOF1-207ENST00000504761 Q8NDZ9 215 aa9.06□□□□□ -0.96
TCOF1-207ENST00000504761 CXCL6P80162 114 aa9.06□□□□□ -0.96
TCOF1-207ENST00000504761 ZFHX3Q15911 3703 aa9.05□□□□□ -0.96
TCOF1-207ENST00000504761 RPL37AP61513 92 aaKnown RBP9.05□□□□□ -0.96
TCOF1-207ENST00000504761 CNBPP62633 177 aaKnown RBP9.04□□□□□ -0.96
TCOF1-207ENST00000504761 KRTAP1-5Q9BYS1 174 aa9.04□□□□□ -0.96
TCOF1-207ENST00000504761 HCG22E2RYF7 251 aa9.04□□□□□ -0.96
TCOF1-207ENST00000504761 MPLKIPQ8TAP9 179 aa9.04□□□□□ -0.96
TCOF1-207ENST00000504761 TNP2Q05952 138 aa9.04□□□□□ -0.96
TCOF1-207ENST00000504761 SMIM29Q86T20 159 aa9.03□□□□□ -0.96
TCOF1-207ENST00000504761 SMR3BP02814 79 aaPredicted RBP9.03□□□□□ -0.96
TCOF1-207ENST00000504761 CSMD2Q7Z408 3487 aa9.03□□□□□ -0.96
TCOF1-207ENST00000504761 FBN1P35555 2871 aaKnown RBP9.02□□□□□ -0.97
TCOF1-207ENST00000504761 PDZD2O15018 2839 aa9.02□□□□□ -0.97
TCOF1-207ENST00000504761 CRYGAP11844 174 aa9□□□□□ -0.97
TCOF1-207ENST00000504761 PCOTHQ58A44 107 aa9□□□□□ -0.97
TCOF1-207ENST00000504761 PLA2G2DQ9UNK4 145 aa9□□□□□ -0.97
TCOF1-207ENST00000504761 PSORS1C2Q9UIG4 136 aa8.99□□□□□ -0.97
TCOF1-207ENST00000504761 TMEM254Q8TBM7 123 aa8.99□□□□□ -0.97
TCOF1-207ENST00000504761 IGFL1Q6UW32 110 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms