RNA–Protein interactions for RNA: ENST00000504044.1

NFKB1-204, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2

Gene NFKB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-204ENST00000504044 KRTAP13-2Q52LG2 175 aa10.53□□□□□ -0.72
NFKB1-204ENST00000504044 LINC00308Q8TCZ7 52 aa10.53□□□□□ -0.72
NFKB1-204ENST00000504044 SMCR5Q8TEV8 140 aa10.53□□□□□ -0.72
NFKB1-204ENST00000504044 KRTAP4-16G5E9R7 235 aaPredicted RBP10.52□□□□□ -0.73
NFKB1-204ENST00000504044 S100A6P06703 90 aa10.52□□□□□ -0.73
NFKB1-204ENST00000504044 B5MCH6 92 aa10.51□□□□□ -0.73
NFKB1-204ENST00000504044 SOSTDC1Q6X4U4 206 aa10.51□□□□□ -0.73
NFKB1-204ENST00000504044 LINC00518Q8N0U6 118 aa10.51□□□□□ -0.73
NFKB1-204ENST00000504044 ZNF73O43830 326 aaPredicted RBP10.5□□□□□ -0.73
NFKB1-204ENST00000504044 Q6ZRX8 168 aa10.5□□□□□ -0.73
NFKB1-204ENST00000504044 OR13C6PQ8NH95 151 aa10.5□□□□□ -0.73
NFKB1-204ENST00000504044 C4orf48Q5BLP8 95 aa10.49□□□□□ -0.73
NFKB1-204ENST00000504044 SPAG11AQ6PDA7 123 aa10.49□□□□□ -0.73
NFKB1-204ENST00000504044 LITAFQ99732 161 aa10.49□□□□□ -0.73
NFKB1-204ENST00000504044 SPANXDQ9BXN6 97 aa10.48□□□□□ -0.73
NFKB1-204ENST00000504044 HSBP1L1C9JCN9 74 aa10.47□□□□□ -0.73
NFKB1-204ENST00000504044 Q6ZVH6 145 aa10.47□□□□□ -0.73
NFKB1-204ENST00000504044 IFITM1P13164 125 aa10.46□□□□□ -0.73
NFKB1-204ENST00000504044 ATOH7Q8N100 152 aa10.46□□□□□ -0.73
NFKB1-204ENST00000504044 TTTY13Q9BZ97 58 aa10.46□□□□□ -0.73
NFKB1-204ENST00000504044 GAGE2AQ6NT46 116 aa10.45□□□□□ -0.74
NFKB1-204ENST00000504044 HIST3H2BBQ8N257 126 aa10.45□□□□□ -0.74
NFKB1-204ENST00000504044 EIF4EBP3O60516 100 aaPredicted RBP10.44□□□□□ -0.74
NFKB1-204ENST00000504044 ANKRD39Q53RE8 183 aa10.44□□□□□ -0.74
NFKB1-204ENST00000504044 C3orf22Q8N5N4 141 aa10.44□□□□□ -0.74
NFKB1-204ENST00000504044 PPDPFQ9H3Y8 114 aa10.44□□□□□ -0.74
NFKB1-204ENST00000504044 UBR4Q5T4S7 5183 aa10.43□□□□□ -0.74
NFKB1-204ENST00000504044 C5orf52A6NGY3 159 aa10.43□□□□□ -0.74
NFKB1-204ENST00000504044 LINC00483Q53H64 154 aa10.43□□□□□ -0.74
NFKB1-204ENST00000504044 HIST1H2BLQ99880 126 aa10.43□□□□□ -0.74
NFKB1-204ENST00000504044 Q9BRP9 147 aa10.41□□□□□ -0.74
NFKB1-204ENST00000504044 DHRS4-AS1Q9P1J3 65 aa10.41□□□□□ -0.74
NFKB1-204ENST00000504044 ERC2-IT1O76042 136 aa10.39□□□□□ -0.75
NFKB1-204ENST00000504044 SLC25A34Q6PIV7 304 aa10.39□□□□□ -0.75
NFKB1-204ENST00000504044 SSBP3-AS1Q7Z2R9 100 aa10.38□□□□□ -0.75
NFKB1-204ENST00000504044 PCP2Q8IVA1 136 aa10.38□□□□□ -0.75
NFKB1-204ENST00000504044 Q8NBF4 154 aa10.38□□□□□ -0.75
NFKB1-204ENST00000504044 IGLV9-49A0A0B4J1Y8 123 aa10.37□□□□□ -0.75
NFKB1-204ENST00000504044 SPINK1P00995 79 aa10.37□□□□□ -0.75
NFKB1-204ENST00000504044 LRP2P98164 4655 aa10.36□□□□□ -0.75
NFKB1-204ENST00000504044 A6NDN8 102 aa10.36□□□□□ -0.75
NFKB1-204ENST00000504044 COX7BP24311 80 aa10.36□□□□□ -0.75
NFKB1-204ENST00000504044 TRAV13-2A0A0B4J235 113 aa10.35□□□□□ -0.75
NFKB1-204ENST00000504044 MOBPQ13875 183 aa10.35□□□□□ -0.75
NFKB1-204ENST00000504044 C6orf99Q4VX62 202 aa10.34□□□□□ -0.75
NFKB1-204ENST00000504044 MUSTN1Q8IVN3 82 aa10.34□□□□□ -0.75
NFKB1-204ENST00000504044 TRBV7-6A0A0J9YX20 115 aa10.33□□□□□ -0.76
NFKB1-204ENST00000504044 SCGB1D1O95968 90 aa10.33□□□□□ -0.76
NFKB1-204ENST00000504044 ELOF1P60002 83 aaKnown RBP10.33□□□□□ -0.76
NFKB1-204ENST00000504044 C9orf153Q5TBE3 101 aa10.33□□□□□ -0.76
NFKB1-204ENST00000504044 RETNLBQ9BQ08 111 aa10.33□□□□□ -0.76
NFKB1-204ENST00000504044 IGLV7-46A0A075B6I9 117 aa10.31□□□□□ -0.76
NFKB1-204ENST00000504044 A0A1B0GWB2 263 aa10.31□□□□□ -0.76
NFKB1-204ENST00000504044 A4D1N5 150 aa10.3□□□□□ -0.76
NFKB1-204ENST00000504044 RPS29P62273 56 aaKnown RBP10.3□□□□□ -0.76
NFKB1-204ENST00000504044 FP248Q71RG6 208 aaPredicted RBP10.3□□□□□ -0.76
NFKB1-204ENST00000504044 LAMTOR3Q9UHA4 124 aa10.3□□□□□ -0.76
NFKB1-204ENST00000504044 ST20-AS1Q8NBB2 130 aa10.29□□□□□ -0.76
NFKB1-204ENST00000504044 NHP2Q9NX24 153 aaKnown RBP10.29□□□□□ -0.76
NFKB1-204ENST00000504044 TAL2Q16559 108 aa10.28□□□□□ -0.76
NFKB1-204ENST00000504044 TPRXLQ17RH7 258 aa10.27□□□□□ -0.77
NFKB1-204ENST00000504044 CDIP1Q9H305 208 aa10.27□□□□□ -0.77
NFKB1-204ENST00000504044 SPRR1BP22528 89 aa10.26□□□□□ -0.77
NFKB1-204ENST00000504044 VAMP3Q15836 100 aa10.26□□□□□ -0.77
NFKB1-204ENST00000504044 SLC25A20O43772 301 aa10.24□□□□□ -0.77
NFKB1-204ENST00000504044 TEX49A0A1B0GTD5 131 aa10.23□□□□□ -0.77
NFKB1-204ENST00000504044 HIST1H4GQ99525 98 aa10.22□□□□□ -0.77
NFKB1-204ENST00000504044 COX8AP10176 69 aa10.21□□□□□ -0.77
NFKB1-204ENST00000504044 DEFB105AQ8NG35 78 aa10.21□□□□□ -0.77
NFKB1-204ENST00000504044 SMIM11BQ8TCY0 68 aa10.2□□□□□ -0.78
NFKB1-204ENST00000504044 LIMD2Q9BT23 127 aa10.2□□□□□ -0.78
NFKB1-204ENST00000504044 DLEU1O43261 78 aa10.19□□□□□ -0.78
NFKB1-204ENST00000504044 A0A0U1RQV1 116 aa10.17□□□□□ -0.78
NFKB1-204ENST00000504044 Q8N377 158 aa10.17□□□□□ -0.78
NFKB1-204ENST00000504044 PRO1933Q9H354 126 aa10.17□□□□□ -0.78
NFKB1-204ENST00000504044 LPAP08519 4548 aa10.16□□□□□ -0.78
NFKB1-204ENST00000504044 Q1RN00 199 aa10.16□□□□□ -0.78
NFKB1-204ENST00000504044 VAMP8Q9BV40 100 aa10.16□□□□□ -0.78
NFKB1-204ENST00000504044 RNF213Q63HN8 5207 aa10.15□□□□□ -0.78
NFKB1-204ENST00000504044 IGLV5-48A0A075B6I7 105 aa10.14□□□□□ -0.79
NFKB1-204ENST00000504044 SPATA45Q537H7 98 aa10.14□□□□□ -0.79
NFKB1-204ENST00000504044 PAM16Q9Y3D7 125 aa10.14□□□□□ -0.79
NFKB1-204ENST00000504044 BVES-AS1Q5T3Y7 98 aa10.13□□□□□ -0.79
NFKB1-204ENST00000504044 F8WEM9 126 aa10.12□□□□□ -0.79
NFKB1-204ENST00000504044 CD164Q04900 197 aa10.12□□□□□ -0.79
NFKB1-204ENST00000504044 hADV29S1A0JD25 119 aa10.11□□□□□ -0.79
NFKB1-204ENST00000504044 H7C2G1 150 aa10.11□□□□□ -0.79
NFKB1-204ENST00000504044 SNCGO76070 127 aa10.11□□□□□ -0.79
NFKB1-204ENST00000504044 C14orf144Q96I85 54 aa10.11□□□□□ -0.79
NFKB1-204ENST00000504044 HIGD1BQ9P298 99 aa10.11□□□□□ -0.79
NFKB1-204ENST00000504044 HRCT1Q6UXD1 115 aa10.1□□□□□ -0.79
NFKB1-204ENST00000504044 LINC00575Q6W349 94 aa10.1□□□□□ -0.79
NFKB1-204ENST00000504044 RAB37Q96AX2 223 aa10.1□□□□□ -0.79
NFKB1-204ENST00000504044 C12orf57Q99622 126 aa10.1□□□□□ -0.79
NFKB1-204ENST00000504044 KRTAP13-3Q3SY46 172 aa10.08□□□□□ -0.8
NFKB1-204ENST00000504044 TMEM238LA0A1B0GVL6 79 aa10.07□□□□□ -0.8
NFKB1-204ENST00000504044 A6NJY4 79 aa10.07□□□□□ -0.8
NFKB1-204ENST00000504044 LINC01547P58512 204 aaPredicted RBP10.07□□□□□ -0.8
NFKB1-204ENST00000504044 SMIM29Q86T20 159 aa10.06□□□□□ -0.8
NFKB1-204ENST00000504044 Q6ZQY7 126 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms