RNA–Protein interactions for RNA: ENST00000503659.5

RNF4-204, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-204ENST00000503659 TTTY13Q9BZ97 58 aa10.5□□□□□ -0.73
RNF4-204ENST00000503659 TRAV23DV6A0A075B6W5 121 aa10.49□□□□□ -0.73
RNF4-204ENST00000503659 A0A0U1RQV1 116 aa10.49□□□□□ -0.73
RNF4-204ENST00000503659 MUC2Q02817 5179 aa10.48□□□□□ -0.73
RNF4-204ENST00000503659 TIMM17BO60830 172 aa10.48□□□□□ -0.73
RNF4-204ENST00000503659 LINC00308Q8TCZ7 52 aa10.48□□□□□ -0.73
RNF4-204ENST00000503659 ZNF815PA8K554 130 aa10.47□□□□□ -0.73
RNF4-204ENST00000503659 KRTDAPP60985 99 aa10.47□□□□□ -0.73
RNF4-204ENST00000503659 SPAG11AQ6PDA7 123 aa10.47□□□□□ -0.73
RNF4-204ENST00000503659 Q8NBF4 154 aa10.47□□□□□ -0.73
RNF4-204ENST00000503659 GAGE2AQ6NT46 116 aa10.46□□□□□ -0.73
RNF4-204ENST00000503659 SPANXCQ9NY87 97 aa10.46□□□□□ -0.73
RNF4-204ENST00000503659 ZNF73O43830 326 aaPredicted RBP10.45□□□□□ -0.74
RNF4-204ENST00000503659 TPRXLQ17RH7 258 aa10.44□□□□□ -0.74
RNF4-204ENST00000503659 IGLV7-46A0A075B6I9 117 aa10.42□□□□□ -0.74
RNF4-204ENST00000503659 MOBPQ13875 183 aa10.41□□□□□ -0.74
RNF4-204ENST00000503659 JOSD1Q15040 202 aaPredicted RBP10.41□□□□□ -0.74
RNF4-204ENST00000503659 ANKRD39Q53RE8 183 aa10.41□□□□□ -0.74
RNF4-204ENST00000503659 MUC17Q685J3 4493 aa10.41□□□□□ -0.74
RNF4-204ENST00000503659 IGLV9-49A0A0B4J1Y8 123 aa10.4□□□□□ -0.74
RNF4-204ENST00000503659 C4orf48Q5BLP8 95 aa10.4□□□□□ -0.74
RNF4-204ENST00000503659 C20orf202A1L168 122 aa10.39□□□□□ -0.75
RNF4-204ENST00000503659 ATOH7Q8N100 152 aa10.39□□□□□ -0.75
RNF4-204ENST00000503659 CDIP1Q9H305 208 aa10.39□□□□□ -0.75
RNF4-204ENST00000503659 ST20-AS1Q8NBB2 130 aa10.38□□□□□ -0.75
RNF4-204ENST00000503659 OR13C6PQ8NH95 151 aa10.38□□□□□ -0.75
RNF4-204ENST00000503659 SPANXDQ9BXN6 97 aa10.38□□□□□ -0.75
RNF4-204ENST00000503659 CBY1Q9Y3M2 126 aa10.38□□□□□ -0.75
RNF4-204ENST00000503659 SPINK1P00995 79 aa10.37□□□□□ -0.75
RNF4-204ENST00000503659 SCGB1D4Q6XE38 83 aa10.35□□□□□ -0.75
RNF4-204ENST00000503659 FP248Q71RG6 208 aaPredicted RBP10.35□□□□□ -0.75
RNF4-204ENST00000503659 SSBP3-AS1Q7Z2R9 100 aa10.35□□□□□ -0.75
RNF4-204ENST00000503659 HINT1P49773 126 aaPredicted RBP10.34□□□□□ -0.75
RNF4-204ENST00000503659 PCP2Q8IVA1 136 aa10.34□□□□□ -0.75
RNF4-204ENST00000503659 C5orf52A6NGY3 159 aa10.33□□□□□ -0.76
RNF4-204ENST00000503659 LINC00518Q8N0U6 118 aa10.33□□□□□ -0.76
RNF4-204ENST00000503659 ELOF1P60002 83 aaKnown RBP10.31□□□□□ -0.76
RNF4-204ENST00000503659 RPS29P62273 56 aaKnown RBP10.31□□□□□ -0.76
RNF4-204ENST00000503659 C6orf99Q4VX62 202 aa10.31□□□□□ -0.76
RNF4-204ENST00000503659 HIST3H2BBQ8N257 126 aa10.31□□□□□ -0.76
RNF4-204ENST00000503659 SPRR1BP22528 89 aa10.3□□□□□ -0.76
RNF4-204ENST00000503659 AKR1D1P51857 326 aa10.3□□□□□ -0.76
RNF4-204ENST00000503659 C9orf153Q5TBE3 101 aa10.3□□□□□ -0.76
RNF4-204ENST00000503659 Q8N377 158 aa10.3□□□□□ -0.76
RNF4-204ENST00000503659 HIST1H2BLQ99880 126 aa10.3□□□□□ -0.76
RNF4-204ENST00000503659 DHRS4-AS1Q9P1J3 65 aa10.3□□□□□ -0.76
RNF4-204ENST00000503659 IFITM1P13164 125 aa10.29□□□□□ -0.76
RNF4-204ENST00000503659 COX7BP24311 80 aa10.28□□□□□ -0.76
RNF4-204ENST00000503659 KRTAP13-3Q3SY46 172 aa10.28□□□□□ -0.76
RNF4-204ENST00000503659 Q6ZVH6 145 aa10.28□□□□□ -0.76
RNF4-204ENST00000503659 MUSTN1Q8IVN3 82 aa10.27□□□□□ -0.77
RNF4-204ENST00000503659 COPS9Q8WXC6 57 aa10.27□□□□□ -0.77
RNF4-204ENST00000503659 S100A1P23297 94 aa10.26□□□□□ -0.77
RNF4-204ENST00000503659 SNRPEP62304 92 aaKnown RBP10.26□□□□□ -0.77
RNF4-204ENST00000503659 FAT4Q6V0I7 4981 aa10.25□□□□□ -0.77
RNF4-204ENST00000503659 S100A2P29034 98 aa10.24□□□□□ -0.77
RNF4-204ENST00000503659 LCE2AQ5TA79 106 aaPredicted RBP10.24□□□□□ -0.77
RNF4-204ENST00000503659 TRBV7-6A0A0J9YX20 115 aa10.23□□□□□ -0.77
RNF4-204ENST00000503659 A6NDN8 102 aa10.23□□□□□ -0.77
RNF4-204ENST00000503659 SLC25A20O43772 301 aa10.23□□□□□ -0.77
RNF4-204ENST00000503659 SLC25A34Q6PIV7 304 aa10.21□□□□□ -0.77
RNF4-204ENST00000503659 A0A1B0GWB2 263 aa10.2□□□□□ -0.78
RNF4-204ENST00000503659 LAMTOR3Q9UHA4 124 aa10.19□□□□□ -0.78
RNF4-204ENST00000503659 S100A6P06703 90 aa10.18□□□□□ -0.78
RNF4-204ENST00000503659 Q1RN00 199 aa10.18□□□□□ -0.78
RNF4-204ENST00000503659 DEFB105AQ8NG35 78 aa10.18□□□□□ -0.78
RNF4-204ENST00000503659 TRAV13-2A0A0B4J235 113 aa10.17□□□□□ -0.78
RNF4-204ENST00000503659 LINC01547P58512 204 aaPredicted RBP10.17□□□□□ -0.78
RNF4-204ENST00000503659 TAL2Q16559 108 aa10.17□□□□□ -0.78
RNF4-204ENST00000503659 SMIM11BQ8TCY0 68 aa10.17□□□□□ -0.78
RNF4-204ENST00000503659 IGLV5-48A0A075B6I7 105 aa10.16□□□□□ -0.78
RNF4-204ENST00000503659 TEX49A0A1B0GTD5 131 aa10.16□□□□□ -0.78
RNF4-204ENST00000503659 HSBP1L1C9JCN9 74 aa10.16□□□□□ -0.78
RNF4-204ENST00000503659 SMIM29Q86T20 159 aa10.16□□□□□ -0.78
RNF4-204ENST00000503659 ASB16-AS1Q495Z4 193 aa10.15□□□□□ -0.78
RNF4-204ENST00000503659 HRCT1Q6UXD1 115 aa10.15□□□□□ -0.78
RNF4-204ENST00000503659 A4D1N5 150 aa10.13□□□□□ -0.79
RNF4-204ENST00000503659 SEC61BP60468 96 aaKnown RBP10.11□□□□□ -0.79
RNF4-204ENST00000503659 LIMD2Q9BT23 127 aa10.11□□□□□ -0.79
RNF4-204ENST00000503659 KRTAP9-2Q9BYQ4 174 aa10.11□□□□□ -0.79
RNF4-204ENST00000503659 PRO1933Q9H354 126 aa10.1□□□□□ -0.79
RNF4-204ENST00000503659 SCGB1D1O95968 90 aa10.09□□□□□ -0.79
RNF4-204ENST00000503659 CD164Q04900 197 aa10.09□□□□□ -0.79
RNF4-204ENST00000503659 NHP2Q9NX24 153 aaKnown RBP10.09□□□□□ -0.79
RNF4-204ENST00000503659 XP32Q5T750 250 aa10.08□□□□□ -0.8
RNF4-204ENST00000503659 A0A0G2JQZ4 141 aa10.07□□□□□ -0.8
RNF4-204ENST00000503659 KRTAP4-1Q9BYQ7 146 aa10.07□□□□□ -0.8
RNF4-204ENST00000503659 COX8AP10176 69 aa10.06□□□□□ -0.8
RNF4-204ENST00000503659 H7C2G1 150 aa10.05□□□□□ -0.8
RNF4-204ENST00000503659 LINC00575Q6W349 94 aa10.05□□□□□ -0.8
RNF4-204ENST00000503659 C12orf57Q99622 126 aa10.04□□□□□ -0.8
RNF4-204ENST00000503659 VAMP3Q15836 100 aa10.03□□□□□ -0.8
RNF4-204ENST00000503659 Q5XG85 94 aa10.03□□□□□ -0.8
RNF4-204ENST00000503659 DLEU1O43261 78 aa10.02□□□□□ -0.81
RNF4-204ENST00000503659 HIST1H4GQ99525 98 aa10.02□□□□□ -0.81
RNF4-204ENST00000503659 hADV29S1A0JD25 119 aa10□□□□□ -0.81
RNF4-204ENST00000503659 Q6ZQY7 126 aa10□□□□□ -0.81
RNF4-204ENST00000503659 C14orf144Q96I85 54 aa9.98□□□□□ -0.81
RNF4-204ENST00000503659 C9orf92A6NGG3 77 aa9.97□□□□□ -0.81
RNF4-204ENST00000503659 C1orf195Q5TG92 126 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms