RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 UBE2AP49459 152 aa9.26□□□□□ -0.93
DDR1-250ENST00000503628 KRTAP13-1Q8IUC0 172 aa9.26□□□□□ -0.93
DDR1-250ENST00000503628 COPS9Q8WXC6 57 aa9.26□□□□□ -0.93
DDR1-250ENST00000503628 KCNQ1DNQ9H478 68 aa9.26□□□□□ -0.93
DDR1-250ENST00000503628 S100A7L2Q5SY68 101 aa9.25□□□□□ -0.93
DDR1-250ENST00000503628 FAM19A1Q7Z5A9 133 aa9.25□□□□□ -0.93
DDR1-250ENST00000503628 VAMP8Q9BV40 100 aa9.25□□□□□ -0.93
DDR1-250ENST00000503628 PPDPFQ9H3Y8 114 aa9.25□□□□□ -0.93
DDR1-250ENST00000503628 PAM16Q9Y3D7 125 aa9.25□□□□□ -0.93
DDR1-250ENST00000503628 MUC17Q685J3 4493 aa9.25□□□□□ -0.93
DDR1-250ENST00000503628 A0A087X002 238 aa9.24□□□□□ -0.93
DDR1-250ENST00000503628 IGLV6-57P01721 117 aa9.24□□□□□ -0.93
DDR1-250ENST00000503628 COX8AP10176 69 aa9.24□□□□□ -0.93
DDR1-250ENST00000503628 S100A12P80511 92 aa9.24□□□□□ -0.93
DDR1-250ENST00000503628 SPATA45Q537H7 98 aa9.24□□□□□ -0.93
DDR1-250ENST00000503628 PYY3Q5JQD4 70 aa9.23□□□□□ -0.93
DDR1-250ENST00000503628 SPRR1AP35321 89 aa9.22□□□□□ -0.93
DDR1-250ENST00000503628 PRLHP81277 87 aa9.22□□□□□ -0.93
DDR1-250ENST00000503628 MUSTN1Q8IVN3 82 aa9.22□□□□□ -0.93
DDR1-250ENST00000503628 TYMSOSQ8TAI1 123 aa9.22□□□□□ -0.93
DDR1-250ENST00000503628 RETNLBQ9BQ08 111 aa9.22□□□□□ -0.93
DDR1-250ENST00000503628 CDIP1Q9H305 208 aa9.22□□□□□ -0.93
DDR1-250ENST00000503628 DLEU1O43261 78 aa9.21□□□□□ -0.94
DDR1-250ENST00000503628 LINC00518Q8N0U6 118 aa9.21□□□□□ -0.94
DDR1-250ENST00000503628 LINC00337Q8N6G1 96 aa9.21□□□□□ -0.94
DDR1-250ENST00000503628 FSIP2Q5CZC0 6907 aa9.2□□□□□ -0.94
DDR1-250ENST00000503628 KRTAP4-16G5E9R7 235 aaPredicted RBP9.2□□□□□ -0.94
DDR1-250ENST00000503628 LCE2DQ5TA82 110 aaPredicted RBP9.2□□□□□ -0.94
DDR1-250ENST00000503628 C14orf144Q96I85 54 aa9.2□□□□□ -0.94
DDR1-250ENST00000503628 TRAV23DV6A0A075B6W5 121 aa9.19□□□□□ -0.94
DDR1-250ENST00000503628 ETDCA0A1B0GVM5 59 aa9.19□□□□□ -0.94
DDR1-250ENST00000503628 CRYGAP11844 174 aa9.19□□□□□ -0.94
DDR1-250ENST00000503628 OR13C6PQ8NH95 151 aa9.19□□□□□ -0.94
DDR1-250ENST00000503628 CRCT1Q9UGL9 99 aa9.19□□□□□ -0.94
DDR1-250ENST00000503628 CBY1Q9Y3M2 126 aa9.19□□□□□ -0.94
DDR1-250ENST00000503628 SLC25A34Q6PIV7 304 aa9.17□□□□□ -0.94
DDR1-250ENST00000503628 TPRXLQ17RH7 258 aa9.16□□□□□ -0.94
DDR1-250ENST00000503628 ANAPC11Q9NYG5 84 aa9.16□□□□□ -0.94
DDR1-250ENST00000503628 B5MCH6 92 aa9.15□□□□□ -0.94
DDR1-250ENST00000503628 ZNF73O43830 326 aaPredicted RBP9.15□□□□□ -0.94
DDR1-250ENST00000503628 HIST1H4GQ99525 98 aa9.15□□□□□ -0.94
DDR1-250ENST00000503628 HIGD2AQ9BW72 106 aa9.15□□□□□ -0.94
DDR1-250ENST00000503628 IGLV7-46A0A075B6I9 117 aa9.14□□□□□ -0.95
DDR1-250ENST00000503628 HIGD1BQ9P298 99 aa9.14□□□□□ -0.95
DDR1-250ENST00000503628 KRTAP13-2Q52LG2 175 aa9.13□□□□□ -0.95
DDR1-250ENST00000503628 Q6ZRX8 168 aa9.13□□□□□ -0.95
DDR1-250ENST00000503628 TRAV13-2A0A0B4J235 113 aa9.12□□□□□ -0.95
DDR1-250ENST00000503628 A4D1N5 150 aa9.12□□□□□ -0.95
DDR1-250ENST00000503628 A6NDN8 102 aa9.12□□□□□ -0.95
DDR1-250ENST00000503628 HINT1P49773 126 aaPredicted RBP9.11□□□□□ -0.95
DDR1-250ENST00000503628 C2orf91Q6ZV80 131 aa9.11□□□□□ -0.95
DDR1-250ENST00000503628 SMCR5Q8TEV8 140 aa9.11□□□□□ -0.95
DDR1-250ENST00000503628 LINC00304Q8N9R0 145 aa9.1□□□□□ -0.95
DDR1-250ENST00000503628 Q9BRP9 147 aa9.1□□□□□ -0.95
DDR1-250ENST00000503628 LINC01547P58512 204 aaPredicted RBP9.08□□□□□ -0.96
DDR1-250ENST00000503628 FAM229BQ4G0N7 80 aa9.08□□□□□ -0.96
DDR1-250ENST00000503628 C6orf99Q4VX62 202 aa9.08□□□□□ -0.96
DDR1-250ENST00000503628 SPRR4Q96PI1 79 aa9.08□□□□□ -0.96
DDR1-250ENST00000503628 ZNF706Q9Y5V0 76 aaPredicted RBP9.08□□□□□ -0.96
DDR1-250ENST00000503628 ERC2-IT1O76042 136 aa9.06□□□□□ -0.96
DDR1-250ENST00000503628 COX7BP24311 80 aa9.06□□□□□ -0.96
DDR1-250ENST00000503628 ELOF1P60002 83 aaKnown RBP9.06□□□□□ -0.96
DDR1-250ENST00000503628 TAL2Q16559 108 aa9.06□□□□□ -0.96
DDR1-250ENST00000503628 TRBV7-6A0A0J9YX20 115 aa9.05□□□□□ -0.96
DDR1-250ENST00000503628 SMIM11BQ8TCY0 68 aa9.05□□□□□ -0.96
DDR1-250ENST00000503628 C12orf57Q99622 126 aa9.05□□□□□ -0.96
DDR1-250ENST00000503628 UQCR10Q9UDW1 63 aa9.04□□□□□ -0.96
DDR1-250ENST00000503628 CEND1Q8N111 149 aa9.03□□□□□ -0.96
DDR1-250ENST00000503628 DHRS4-AS1Q9P1J3 65 aa9.03□□□□□ -0.96
DDR1-250ENST00000503628 A0A1B0GWB2 263 aa9.02□□□□□ -0.97
DDR1-250ENST00000503628 SMIM6P0DI80 62 aa9.02□□□□□ -0.97
DDR1-250ENST00000503628 CFC1BP0CG36 223 aa9.01□□□□□ -0.97
DDR1-250ENST00000503628 CFC1P0CG37 223 aa9.01□□□□□ -0.97
DDR1-250ENST00000503628 LINC00483Q53H64 154 aa9.01□□□□□ -0.97
DDR1-250ENST00000503628 TMEM238LA0A1B0GVL6 79 aa9□□□□□ -0.97
DDR1-250ENST00000503628 A6NJY4 79 aa9□□□□□ -0.97
DDR1-250ENST00000503628 CTAG1AP78358 180 aa9□□□□□ -0.97
DDR1-250ENST00000503628 HSD52Q0P140 79 aa9□□□□□ -0.97
DDR1-250ENST00000503628 GAGE2AQ6NT46 116 aa9□□□□□ -0.97
DDR1-250ENST00000503628 KRTAP4-1Q9BYQ7 146 aa9□□□□□ -0.97
DDR1-250ENST00000503628 A0A0B4J2C4 111 aa8.99□□□□□ -0.97
DDR1-250ENST00000503628 LOC105371267A0A1B0GV96 52 aa8.99□□□□□ -0.97
DDR1-250ENST00000503628 RAB37Q96AX2 223 aa8.99□□□□□ -0.97
DDR1-250ENST00000503628 FXYD2P54710 66 aa8.98□□□□□ -0.97
DDR1-250ENST00000503628 ASB16-AS1Q495Z4 193 aa8.98□□□□□ -0.97
DDR1-250ENST00000503628 C3orf22Q8N5N4 141 aa8.98□□□□□ -0.97
DDR1-250ENST00000503628 ST20-AS1Q8NBB2 130 aa8.98□□□□□ -0.97
DDR1-250ENST00000503628 VAMP3Q15836 100 aa8.97□□□□□ -0.97
DDR1-250ENST00000503628 PRO1933Q9H354 126 aa8.96□□□□□ -0.98
DDR1-250ENST00000503628 H7C2G1 150 aa8.95□□□□□ -0.98
DDR1-250ENST00000503628 NHP2Q9NX24 153 aaKnown RBP8.94□□□□□ -0.98
DDR1-250ENST00000503628 KRTAP13-3Q3SY46 172 aa8.93□□□□□ -0.98
DDR1-250ENST00000503628 BVES-AS1Q5T3Y7 98 aa8.93□□□□□ -0.98
DDR1-250ENST00000503628 PRO1854Q9UHT4 67 aa8.93□□□□□ -0.98
DDR1-250ENST00000503628 SLC25A20O43772 301 aa8.92□□□□□ -0.98
DDR1-250ENST00000503628 SPRR1BP22528 89 aa8.92□□□□□ -0.98
DDR1-250ENST00000503628 LINC00575Q6W349 94 aa8.92□□□□□ -0.98
DDR1-250ENST00000503628 FP248Q71RG6 208 aaPredicted RBP8.92□□□□□ -0.98
DDR1-250ENST00000503628 IGLV9-49A0A0B4J1Y8 123 aa8.91□□□□□ -0.98
DDR1-250ENST00000503628 Q1RN00 199 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms