RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 Q8NAQ8 132 aa11.46□□□□□ -0.57
HMGXB3-201ENST00000502717 CYSTM1Q9H1C7 97 aa11.46□□□□□ -0.58
HMGXB3-201ENST00000502717 SPAG11AQ6PDA7 123 aa11.45□□□□□ -0.58
HMGXB3-201ENST00000502717 LINC00612Q8N6U2 182 aa11.45□□□□□ -0.58
HMGXB3-201ENST00000502717 CDH23Q9H251 3354 aa11.44□□□□□ -0.58
HMGXB3-201ENST00000502717 CIRBP-AS1Q8TBR5 109 aa11.43□□□□□ -0.58
HMGXB3-201ENST00000502717 Q8N377 158 aa11.42□□□□□ -0.58
HMGXB3-201ENST00000502717 CFAP54Q96N23 3096 aa11.42□□□□□ -0.58
HMGXB3-201ENST00000502717 SETXQ7Z333 2677 aaKnown RBP11.42□□□□□ -0.58
HMGXB3-201ENST00000502717 CENPEQ02224 2701 aa11.41□□□□□ -0.58
HMGXB3-201ENST00000502717 C19orf73Q9NVV2 129 aa11.41□□□□□ -0.58
HMGXB3-201ENST00000502717 RPL37AP61513 92 aaKnown RBP11.4□□□□□ -0.58
HMGXB3-201ENST00000502717 WDFY4Q6ZS81 3184 aa11.39□□□□□ -0.59
HMGXB3-201ENST00000502717 CD164Q04900 197 aa11.39□□□□□ -0.59
HMGXB3-201ENST00000502717 IGLV1-50A0A075B6I6 118 aa11.38□□□□□ -0.59
HMGXB3-201ENST00000502717 SERTAD4-AS1Q5TG53 156 aa11.38□□□□□ -0.59
HMGXB3-201ENST00000502717 OCR1Q9BZK8 76 aa11.38□□□□□ -0.59
HMGXB3-201ENST00000502717 J3QL48 77 aa11.38□□□□□ -0.59
HMGXB3-201ENST00000502717 A8MWP4 228 aa11.37□□□□□ -0.59
HMGXB3-201ENST00000502717 ACYP2P14621 99 aa11.37□□□□□ -0.59
HMGXB3-201ENST00000502717 FLNAP21333 2647 aaKnown RBP11.37□□□□□ -0.59
HMGXB3-201ENST00000502717 COA5Q86WW8 74 aa11.36□□□□□ -0.59
HMGXB3-201ENST00000502717 NBDYA0A0U1RRE5 68 aa11.36□□□□□ -0.59
HMGXB3-201ENST00000502717 PRR15Q8IV56 129 aa11.35□□□□□ -0.59
HMGXB3-201ENST00000502717 A0A1B0GU69 56 aa11.34□□□□□ -0.59
HMGXB3-201ENST00000502717 ATP11AUNQ6ZP68 121 aa11.33□□□□□ -0.6
HMGXB3-201ENST00000502717 PLA2G1BP04054 148 aaKnown RBP11.33□□□□□ -0.6
HMGXB3-201ENST00000502717 XIRP2A4UGR9 3374 aa11.32□□□□□ -0.6
HMGXB3-201ENST00000502717 C15orf56Q8N910 161 aa11.32□□□□□ -0.6
HMGXB3-201ENST00000502717 MOBPQ13875 183 aa11.32□□□□□ -0.6
HMGXB3-201ENST00000502717 LOC101927531A0A1B0GV80 90 aa11.31□□□□□ -0.6
HMGXB3-201ENST00000502717 KRTAP1-3Q8IUG1 177 aa11.31□□□□□ -0.6
HMGXB3-201ENST00000502717 Q1T7F1 81 aa11.31□□□□□ -0.6
HMGXB3-201ENST00000502717 IGFL1Q6UW32 110 aa11.31□□□□□ -0.6
HMGXB3-201ENST00000502717 ITPR3Q14573 2671 aa11.31□□□□□ -0.6
HMGXB3-201ENST00000502717 A0A1W2PNM2 257 aa11.3□□□□□ -0.6
HMGXB3-201ENST00000502717 IGLV5-48A0A075B6I7 105 aa11.3□□□□□ -0.6
HMGXB3-201ENST00000502717 FAM168BA1KXE4 195 aa11.3□□□□□ -0.6
HMGXB3-201ENST00000502717 EPM2AB3EWF7 344 aa11.3□□□□□ -0.6
HMGXB3-201ENST00000502717 FP248Q71RG6 208 aaPredicted RBP11.3□□□□□ -0.6
HMGXB3-201ENST00000502717 AKAP13Q12802 2813 aa11.28□□□□□ -0.6
HMGXB3-201ENST00000502717 DNAH10OSP0CZ25 163 aa11.28□□□□□ -0.6
HMGXB3-201ENST00000502717 SPANXA2-OT1Q8N9U9 137 aa11.28□□□□□ -0.6
HMGXB3-201ENST00000502717 PLA2G2DQ9UNK4 145 aa11.28□□□□□ -0.6
HMGXB3-201ENST00000502717 OXTP01178 125 aa11.27□□□□□ -0.6
HMGXB3-201ENST00000502717 KTN1-AS1Q86SY8 53 aa11.27□□□□□ -0.6
HMGXB3-201ENST00000502717 VPS13AQ96RL7 3174 aa11.27□□□□□ -0.6
HMGXB3-201ENST00000502717 CFAP46Q8IYW2 2715 aa11.26□□□□□ -0.61
HMGXB3-201ENST00000502717 K7EIL1 84 aa11.25□□□□□ -0.61
HMGXB3-201ENST00000502717 RETNLBQ9BQ08 111 aa11.25□□□□□ -0.61
HMGXB3-201ENST00000502717 TLX1NBP0CAT3 122 aa11.24□□□□□ -0.61
HMGXB3-201ENST00000502717 PHF5AQ7RTV0 110 aaKnown RBP11.24□□□□□ -0.61
HMGXB3-201ENST00000502717 SZT2Q5T011 3432 aa11.24□□□□□ -0.61
HMGXB3-201ENST00000502717 RTL8CO15255 209 aa11.23□□□□□ -0.61
HMGXB3-201ENST00000502717 C8orf87E5RJ46 101 aa11.23□□□□□ -0.61
HMGXB3-201ENST00000502717 STAB1Q9NY15 2570 aa11.22□□□□□ -0.61
HMGXB3-201ENST00000502717 LINC00588Q9Y4M8 146 aa11.21□□□□□ -0.61
HMGXB3-201ENST00000502717 KRTAP1-1Q07627 177 aa11.2□□□□□ -0.62
HMGXB3-201ENST00000502717 DSPP15924 2871 aaKnown RBP11.2□□□□□ -0.62
HMGXB3-201ENST00000502717 SPINK1P00995 79 aa11.19□□□□□ -0.62
HMGXB3-201ENST00000502717 C7orf65Q6ZTY9 151 aa11.18□□□□□ -0.62
HMGXB3-201ENST00000502717 MRPL34Q9BQ48 92 aaKnown RBP11.18□□□□□ -0.62
HMGXB3-201ENST00000502717 LAMA1P25391 3075 aa11.17□□□□□ -0.62
HMGXB3-201ENST00000502717 KRTAP10-3P60369 221 aa11.17□□□□□ -0.62
HMGXB3-201ENST00000502717 FAM229BQ4G0N7 80 aa11.16□□□□□ -0.62
HMGXB3-201ENST00000502717 SPRR4Q96PI1 79 aa11.15□□□□□ -0.63
HMGXB3-201ENST00000502717 DSCR10P59022 87 aa11.14□□□□□ -0.63
HMGXB3-201ENST00000502717 IGKV2D-30A0A075B6S6 120 aa11.14□□□□□ -0.63
HMGXB3-201ENST00000502717 A0A0G2JQZ4 141 aa11.14□□□□□ -0.63
HMGXB3-201ENST00000502717 A0A1W2PNN7 141 aa11.14□□□□□ -0.63
HMGXB3-201ENST00000502717 IGKV2-30P06310 120 aa11.14□□□□□ -0.63
HMGXB3-201ENST00000502717 Q8NDZ9 215 aa11.13□□□□□ -0.63
HMGXB3-201ENST00000502717 C8orf17Q9NRJ1 99 aa11.13□□□□□ -0.63
HMGXB3-201ENST00000502717 CDC42SE1Q9NRR8 79 aa11.12□□□□□ -0.63
HMGXB3-201ENST00000502717 LCA10Q71F78 164 aa11.1□□□□□ -0.63
HMGXB3-201ENST00000502717 IGLV5-37A0A075B6J1 123 aa11.1□□□□□ -0.63
HMGXB3-201ENST00000502717 CHTF8P0CG12 524 aa11.09□□□□□ -0.63
HMGXB3-201ENST00000502717 TYMSOSQ8TAI1 123 aa11.08□□□□□ -0.64
HMGXB3-201ENST00000502717 SPACA4Q8TDM5 124 aa11.08□□□□□ -0.64
HMGXB3-201ENST00000502717 UQCR11O14957 56 aa11.06□□□□□ -0.64
HMGXB3-201ENST00000502717 TEP1Q99973 2627 aaKnown RBP11.06□□□□□ -0.64
HMGXB3-201ENST00000502717 LINC00313P59037 77 aa11.06□□□□□ -0.64
HMGXB3-201ENST00000502717 KRTAP10-11P60412 298 aa11.06□□□□□ -0.64
HMGXB3-201ENST00000502717 A0A1B0GVX0 72 aa11.05□□□□□ -0.64
HMGXB3-201ENST00000502717 VCANP13611 3396 aa11.03□□□□□ -0.64
HMGXB3-201ENST00000502717 IGSF10Q6WRI0 2623 aa11.03□□□□□ -0.64
HMGXB3-201ENST00000502717 BAHCC1Q9P281 2608 aa11.01□□□□□ -0.65
HMGXB3-201ENST00000502717 MAP1AP78559 2803 aaPredicted RBP11□□□□□ -0.65
HMGXB3-201ENST00000502717 Q75L30 129 aa10.99□□□□□ -0.65
HMGXB3-201ENST00000502717 Q8N9P0 234 aaPredicted RBP10.98□□□□□ -0.65
HMGXB3-201ENST00000502717 CR1P17927 2039 aa10.98□□□□□ -0.65
HMGXB3-201ENST00000502717 IGLV7-46A0A075B6I9 117 aa10.98□□□□□ -0.65
HMGXB3-201ENST00000502717 MIR22HGQ0VDD5 57 aa10.97□□□□□ -0.65
HMGXB3-201ENST00000502717 FRYQ5TBA9 3013 aa10.97□□□□□ -0.65
HMGXB3-201ENST00000502717 DNAH14Q0VDD8 3507 aa10.95□□□□□ -0.66
HMGXB3-201ENST00000502717 IGLV8-61A0A075B6I0 122 aa10.94□□□□□ -0.66
HMGXB3-201ENST00000502717 NBEAQ8NFP9 2946 aa10.94□□□□□ -0.66
HMGXB3-201ENST00000502717 RBM12B-AS1Q9P1G2 102 aa10.94□□□□□ -0.66
HMGXB3-201ENST00000502717 CASC10Q5T4H9 136 aa10.92□□□□□ -0.66
HMGXB3-201ENST00000502717 CELSR3Q9NYQ7 3312 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms