RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 HSBP1L1C9JCN9 74 aa9.36□□□□□ -0.91
NR1H3-227ENST00000498548 SMCR5Q8TEV8 140 aa9.36□□□□□ -0.91
NR1H3-227ENST00000498548 SPRR4Q96PI1 79 aa9.36□□□□□ -0.91
NR1H3-227ENST00000498548 RETNLBQ9BQ08 111 aa9.36□□□□□ -0.91
NR1H3-227ENST00000498548 SPRR1AP35321 89 aa9.35□□□□□ -0.91
NR1H3-227ENST00000498548 NPC2P61916 151 aa9.35□□□□□ -0.91
NR1H3-227ENST00000498548 LOC107984156A0A0G2JMH3 177 aa9.34□□□□□ -0.91
NR1H3-227ENST00000498548 ETDCA0A1B0GVM5 59 aa9.34□□□□□ -0.91
NR1H3-227ENST00000498548 KRTAP4-16G5E9R7 235 aaPredicted RBP9.34□□□□□ -0.91
NR1H3-227ENST00000498548 NMUP48645 174 aa9.34□□□□□ -0.91
NR1H3-227ENST00000498548 ARL17AQ8IVW1 177 aa9.34□□□□□ -0.91
NR1H3-227ENST00000498548 LINC00337Q8N6G1 96 aa9.34□□□□□ -0.91
NR1H3-227ENST00000498548 PPDPFQ9H3Y8 114 aa9.33□□□□□ -0.92
NR1H3-227ENST00000498548 A0A0J9YXY3 114 aa9.32□□□□□ -0.92
NR1H3-227ENST00000498548 E9PLD3 99 aa9.32□□□□□ -0.92
NR1H3-227ENST00000498548 EIF4EBP3O60516 100 aaPredicted RBP9.32□□□□□ -0.92
NR1H3-227ENST00000498548 ANKRD39Q53RE8 183 aa9.32□□□□□ -0.92
NR1H3-227ENST00000498548 ADAMTSL4-AS1Q5T5F5 129 aa9.32□□□□□ -0.92
NR1H3-227ENST00000498548 SOSTDC1Q6X4U4 206 aa9.32□□□□□ -0.92
NR1H3-227ENST00000498548 COX8AP10176 69 aa9.31□□□□□ -0.92
NR1H3-227ENST00000498548 CTAG1AP78358 180 aa9.31□□□□□ -0.92
NR1H3-227ENST00000498548 B5MCH6 92 aa9.3□□□□□ -0.92
NR1H3-227ENST00000498548 DLEU1O43261 78 aa9.3□□□□□ -0.92
NR1H3-227ENST00000498548 SLC25A34Q6PIV7 304 aa9.3□□□□□ -0.92
NR1H3-227ENST00000498548 TRBV10-2A0A0K0K1G8 114 aa9.29□□□□□ -0.92
NR1H3-227ENST00000498548 M0R143 59 aa9.29□□□□□ -0.92
NR1H3-227ENST00000498548 ERC2-IT1O76042 136 aa9.29□□□□□ -0.92
NR1H3-227ENST00000498548 SNHG12Q9BXW3 62 aa9.29□□□□□ -0.92
NR1H3-227ENST00000498548 ZNF706Q9Y5V0 76 aaPredicted RBP9.29□□□□□ -0.92
NR1H3-227ENST00000498548 SPANXB1Q9NS25 103 aaPredicted RBP9.28□□□□□ -0.92
NR1H3-227ENST00000498548 S100A7L2Q5SY68 101 aa9.27□□□□□ -0.93
NR1H3-227ENST00000498548 GAGE2AQ6NT46 116 aa9.27□□□□□ -0.93
NR1H3-227ENST00000498548 NDUFC2O95298 119 aa9.26□□□□□ -0.93
NR1H3-227ENST00000498548 Q9BRP9 147 aa9.26□□□□□ -0.93
NR1H3-227ENST00000498548 TTTY13Q9BZ97 58 aa9.26□□□□□ -0.93
NR1H3-227ENST00000498548 IGLV6-57P01721 117 aa9.25□□□□□ -0.93
NR1H3-227ENST00000498548 C2orf91Q6ZV80 131 aa9.24□□□□□ -0.93
NR1H3-227ENST00000498548 Q8NBF4 154 aa9.24□□□□□ -0.93
NR1H3-227ENST00000498548 LITAFQ99732 161 aa9.24□□□□□ -0.93
NR1H3-227ENST00000498548 TRAV23DV6A0A075B6W5 121 aa9.23□□□□□ -0.93
NR1H3-227ENST00000498548 IGLV7-46A0A075B6I9 117 aa9.22□□□□□ -0.93
NR1H3-227ENST00000498548 ZNF815PA8K554 130 aa9.22□□□□□ -0.93
NR1H3-227ENST00000498548 LINC00483Q53H64 154 aa9.22□□□□□ -0.93
NR1H3-227ENST00000498548 C4orf48Q5BLP8 95 aa9.22□□□□□ -0.93
NR1H3-227ENST00000498548 SPAG11AQ6PDA7 123 aa9.22□□□□□ -0.93
NR1H3-227ENST00000498548 Q6ZRX8 168 aa9.22□□□□□ -0.93
NR1H3-227ENST00000498548 PCP2Q8IVA1 136 aa9.22□□□□□ -0.93
NR1H3-227ENST00000498548 LINC00308Q8TCZ7 52 aa9.22□□□□□ -0.93
NR1H3-227ENST00000498548 IGLV9-49A0A0B4J1Y8 123 aa9.21□□□□□ -0.94
NR1H3-227ENST00000498548 OR13C6PQ8NH95 151 aa9.2□□□□□ -0.94
NR1H3-227ENST00000498548 HIGD1BQ9P298 99 aa9.2□□□□□ -0.94
NR1H3-227ENST00000498548 ZNF73O43830 326 aaPredicted RBP9.19□□□□□ -0.94
NR1H3-227ENST00000498548 MOBPQ13875 183 aa9.19□□□□□ -0.94
NR1H3-227ENST00000498548 TIMM17BO60830 172 aa9.18□□□□□ -0.94
NR1H3-227ENST00000498548 ST20-AS1Q8NBB2 130 aa9.18□□□□□ -0.94
NR1H3-227ENST00000498548 MUC17Q685J3 4493 aa9.18□□□□□ -0.94
NR1H3-227ENST00000498548 HINT1P49773 126 aaPredicted RBP9.17□□□□□ -0.94
NR1H3-227ENST00000498548 BVES-AS1Q5T3Y7 98 aa9.17□□□□□ -0.94
NR1H3-227ENST00000498548 SPANXCQ9NY87 97 aa9.17□□□□□ -0.94
NR1H3-227ENST00000498548 COL5A1-AS1Q5SY13 56 aa9.16□□□□□ -0.94
NR1H3-227ENST00000498548 CDIP1Q9H305 208 aa9.16□□□□□ -0.94
NR1H3-227ENST00000498548 HSD52Q0P140 79 aa9.15□□□□□ -0.94
NR1H3-227ENST00000498548 TPRXLQ17RH7 258 aa9.15□□□□□ -0.94
NR1H3-227ENST00000498548 MUC2Q02817 5179 aa9.14□□□□□ -0.95
NR1H3-227ENST00000498548 SPINK1P00995 79 aa9.13□□□□□ -0.95
NR1H3-227ENST00000498548 BATFQ16520 125 aa9.13□□□□□ -0.95
NR1H3-227ENST00000498548 SSBP3-AS1Q7Z2R9 100 aa9.13□□□□□ -0.95
NR1H3-227ENST00000498548 A0A1B0GV90 55 aa9.12□□□□□ -0.95
NR1H3-227ENST00000498548 TAL2Q16559 108 aa9.12□□□□□ -0.95
NR1H3-227ENST00000498548 C9orf153Q5TBE3 101 aa9.12□□□□□ -0.95
NR1H3-227ENST00000498548 SCGB1D4Q6XE38 83 aa9.12□□□□□ -0.95
NR1H3-227ENST00000498548 SPANXDQ9BXN6 97 aa9.11□□□□□ -0.95
NR1H3-227ENST00000498548 CBY1Q9Y3M2 126 aa9.1□□□□□ -0.95
NR1H3-227ENST00000498548 FP248Q71RG6 208 aaPredicted RBP9.09□□□□□ -0.95
NR1H3-227ENST00000498548 C6orf99Q4VX62 202 aa9.08□□□□□ -0.96
NR1H3-227ENST00000498548 COX7BP24311 80 aa9.07□□□□□ -0.96
NR1H3-227ENST00000498548 MUSTN1Q8IVN3 82 aa9.07□□□□□ -0.96
NR1H3-227ENST00000498548 Q8N377 158 aa9.07□□□□□ -0.96
NR1H3-227ENST00000498548 CEND1Q8N111 149 aa9.06□□□□□ -0.96
NR1H3-227ENST00000498548 TAX1BP3O14907 124 aa9.05□□□□□ -0.96
NR1H3-227ENST00000498548 ELOF1P60002 83 aaKnown RBP9.05□□□□□ -0.96
NR1H3-227ENST00000498548 KRTAP13-3Q3SY46 172 aa9.05□□□□□ -0.96
NR1H3-227ENST00000498548 DHRS4-AS1Q9P1J3 65 aa9.05□□□□□ -0.96
NR1H3-227ENST00000498548 A6NDN8 102 aa9.04□□□□□ -0.96
NR1H3-227ENST00000498548 DEFB105AQ8NG35 78 aa9.04□□□□□ -0.96
NR1H3-227ENST00000498548 IFITM1P13164 125 aa9.03□□□□□ -0.96
NR1H3-227ENST00000498548 SPRR1BP22528 89 aa9.03□□□□□ -0.96
NR1H3-227ENST00000498548 FXYD2P54710 66 aa9.03□□□□□ -0.96
NR1H3-227ENST00000498548 HRCT1Q6UXD1 115 aa9.03□□□□□ -0.96
NR1H3-227ENST00000498548 RPS29P62273 56 aaKnown RBP9.02□□□□□ -0.97
NR1H3-227ENST00000498548 HIST1H4GQ99525 98 aa9.02□□□□□ -0.97
NR1H3-227ENST00000498548 A0A0U1RQV1 116 aa9.01□□□□□ -0.97
NR1H3-227ENST00000498548 SLC25A20O43772 301 aa9.01□□□□□ -0.97
NR1H3-227ENST00000498548 A0A1B0GWB2 263 aa9□□□□□ -0.97
NR1H3-227ENST00000498548 Q6ZVH6 145 aa9□□□□□ -0.97
NR1H3-227ENST00000498548 COPS9Q8WXC6 57 aa9□□□□□ -0.97
NR1H3-227ENST00000498548 LAMTOR3Q9UHA4 124 aa9□□□□□ -0.97
NR1H3-227ENST00000498548 Q1RN00 199 aa8.99□□□□□ -0.97
NR1H3-227ENST00000498548 C9orf118A6NHY6 69 aa8.97□□□□□ -0.97
NR1H3-227ENST00000498548 TRBV7-6A0A0J9YX20 115 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms