RNA–Protein interactions for RNA: ENST00000497873.1

PAXBP1-209, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 2

Gene PAXBP1, Length 2,277 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-209ENST00000497873 IGHV1-58A0A0C4DH39 117 aa3.74□□□□□ -1.81
PAXBP1-209ENST00000497873 GNRH2O43555 120 aa3.74□□□□□ -1.81
PAXBP1-209ENST00000497873 DEFB136Q30KP8 78 aa3.74□□□□□ -1.81
PAXBP1-209ENST00000497873 WFDC9Q8NEX5 89 aa3.74□□□□□ -1.81
PAXBP1-209ENST00000497873 NDUFA12Q9UI09 145 aa3.74□□□□□ -1.81
PAXBP1-209ENST00000497873 NOTCH1P46531 2555 aa3.74□□□□□ -1.81
PAXBP1-209ENST00000497873 BAALC-AS2P0C853 105 aa3.74□□□□□ -1.81
PAXBP1-209ENST00000497873 MRPS36P82909 103 aaKnown RBP3.74□□□□□ -1.81
PAXBP1-209ENST00000497873 Q6JHZ5 121 aa3.74□□□□□ -1.81
PAXBP1-209ENST00000497873 NPC2P61916 151 aa3.73□□□□□ -1.81
PAXBP1-209ENST00000497873 DYNLRB2Q8TF09 96 aa3.73□□□□□ -1.81
PAXBP1-209ENST00000497873 FBN3Q75N90 2809 aa3.73□□□□□ -1.81
PAXBP1-209ENST00000497873 TRAV12-3A0A0B4J271 114 aa3.72□□□□□ -1.81
PAXBP1-209ENST00000497873 NDUFC2O95298 119 aa3.72□□□□□ -1.81
PAXBP1-209ENST00000497873 TINCRA0A1B0GVN0 87 aa3.72□□□□□ -1.81
PAXBP1-209ENST00000497873 M0QY20 66 aa3.72□□□□□ -1.81
PAXBP1-209ENST00000497873 DEFB131AP59861 70 aa3.72□□□□□ -1.81
PAXBP1-209ENST00000497873 NDUFA1O15239 70 aa3.71□□□□□ -1.82
PAXBP1-209ENST00000497873 LINC00308Q8TCZ7 52 aa3.71□□□□□ -1.82
PAXBP1-209ENST00000497873 IGKV2D-24A0A075B6R9 120 aa3.7□□□□□ -1.82
PAXBP1-209ENST00000497873 IGKV3D-7A0A0C4DH55 119 aa3.7□□□□□ -1.82
PAXBP1-209ENST00000497873 DNAL4O96015 105 aa3.7□□□□□ -1.82
PAXBP1-209ENST00000497873 CIRBPQ14011 172 aaKnown RBP3.7□□□□□ -1.82
PAXBP1-209ENST00000497873 COPS9Q8WXC6 57 aa3.7□□□□□ -1.82
PAXBP1-209ENST00000497873 OBSCN-AS1Q96MR7 158 aa3.7□□□□□ -1.82
PAXBP1-209ENST00000497873 UBE2D4Q9Y2X8 147 aa3.7□□□□□ -1.82
PAXBP1-209ENST00000497873 SERP1Q9Y6X1 66 aa3.7□□□□□ -1.82
PAXBP1-209ENST00000497873 IGKV3-7A0A075B6H7 116 aa3.69□□□□□ -1.82
PAXBP1-209ENST00000497873 TRAV12-2A0A075B6T6 113 aa3.69□□□□□ -1.82
PAXBP1-209ENST00000497873 A0A087WVE0 104 aa3.69□□□□□ -1.82
PAXBP1-209ENST00000497873 DEFB1P60022 68 aa3.69□□□□□ -1.82
PAXBP1-209ENST00000497873 FAM236DA0A1B0GTK5 79 aa3.69□□□□□ -1.82
PAXBP1-209ENST00000497873 KNCNA6PVL3 124 aa3.69□□□□□ -1.82
PAXBP1-209ENST00000497873 FAM236CP0DP71 79 aa3.69□□□□□ -1.82
PAXBP1-209ENST00000497873 FAM74A4Q5TZK3 123 aa3.69□□□□□ -1.82
PAXBP1-209ENST00000497873 LINC00167Q96N53 147 aa3.69□□□□□ -1.82
PAXBP1-209ENST00000497873 LINC00846Q9NV44 126 aa3.69□□□□□ -1.82
PAXBP1-209ENST00000497873 MEGF8Q7Z7M0 2845 aa3.68□□□□□ -1.82
PAXBP1-209ENST00000497873 C8orf87E5RJ46 101 aa3.68□□□□□ -1.82
PAXBP1-209ENST00000497873 SOSTDC1Q6X4U4 206 aa3.68□□□□□ -1.82
PAXBP1-209ENST00000497873 RPL28P46779 137 aaKnown RBP3.68□□□□□ -1.82
PAXBP1-209ENST00000497873 SPINK13Q1W4C9 94 aa3.68□□□□□ -1.82
PAXBP1-209ENST00000497873 C14orf132Q9NPU4 83 aa3.68□□□□□ -1.82
PAXBP1-209ENST00000497873 MUC4Q99102 2169 aa3.68□□□□□ -1.82
PAXBP1-209ENST00000497873 CMYA5Q8N3K9 4069 aa3.68□□□□□ -1.82
PAXBP1-209ENST00000497873 KRTAP10-5P60370 271 aa3.67□□□□□ -1.82
PAXBP1-209ENST00000497873 C1orf158Q8N1D5 194 aa3.67□□□□□ -1.82
PAXBP1-209ENST00000497873 MIR7-3HGQ8N6C7 128 aa3.67□□□□□ -1.82
PAXBP1-209ENST00000497873 SPANXA2-OT1Q8N9U9 137 aa3.67□□□□□ -1.82
PAXBP1-209ENST00000497873 XCL1P47992 114 aa3.67□□□□□ -1.82
PAXBP1-209ENST00000497873 ATP5EP2Q5VTU8 51 aa3.67□□□□□ -1.82
PAXBP1-209ENST00000497873 CDKN2A-AS1Q9UH64 79 aa3.66□□□□□ -1.82
PAXBP1-209ENST00000497873 PKIGQ9Y2B9 76 aa3.66□□□□□ -1.82
PAXBP1-209ENST00000497873 TRAV13-2A0A0B4J235 113 aa3.65□□□□□ -1.82
PAXBP1-209ENST00000497873 H7BZZ5 65 aa3.65□□□□□ -1.82
PAXBP1-209ENST00000497873 BCE1O60756 84 aa3.65□□□□□ -1.82
PAXBP1-209ENST00000497873 S100A7L2Q5SY68 101 aa3.65□□□□□ -1.82
PAXBP1-209ENST00000497873 TGP01266 2768 aa3.65□□□□□ -1.83
PAXBP1-209ENST00000497873 TRBV10-3A0A0K0K1G6 114 aa3.65□□□□□ -1.83
PAXBP1-209ENST00000497873 PRB2P02812 416 aaPredicted RBP3.65□□□□□ -1.83
PAXBP1-209ENST00000497873 CCKP06307 115 aa3.65□□□□□ -1.83
PAXBP1-209ENST00000497873 LYPD5Q6UWN5 251 aa3.65□□□□□ -1.83
PAXBP1-209ENST00000497873 C20orf197Q8N268 126 aa3.65□□□□□ -1.83
PAXBP1-209ENST00000497873 SORL1Q92673 2214 aa3.65□□□□□ -1.83
PAXBP1-209ENST00000497873 H0YGX0 51 aa3.64□□□□□ -1.83
PAXBP1-209ENST00000497873 FP248Q71RG6 208 aaPredicted RBP3.64□□□□□ -1.83
PAXBP1-209ENST00000497873 ZNF625Q96I27 306 aaPredicted RBP3.64□□□□□ -1.83
PAXBP1-209ENST00000497873 TRAV23DV6A0A075B6W5 121 aa3.64□□□□□ -1.83
PAXBP1-209ENST00000497873 CRPP02741 224 aa3.64□□□□□ -1.83
PAXBP1-209ENST00000497873 COX6A2Q02221 97 aa3.64□□□□□ -1.83
PAXBP1-209ENST00000497873 FAM19A3Q7Z5A8 133 aa3.64□□□□□ -1.83
PAXBP1-209ENST00000497873 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.63□□□□□ -1.83
PAXBP1-209ENST00000497873 TRAV7A0A075B6U4 112 aa3.63□□□□□ -1.83
PAXBP1-209ENST00000497873 IGKV2-29A2NJV5 120 aaPredicted RBP3.63□□□□□ -1.83
PAXBP1-209ENST00000497873 NCR3O14931 201 aa3.63□□□□□ -1.83
PAXBP1-209ENST00000497873 IGHV3-53P01767 116 aa3.63□□□□□ -1.83
PAXBP1-209ENST00000497873 KLKP1Q107X0 134 aa3.63□□□□□ -1.83
PAXBP1-209ENST00000497873 C1orf195Q5TG92 126 aa3.63□□□□□ -1.83
PAXBP1-209ENST00000497873 TRBV10-1A0A0K0K1A3 114 aa3.63□□□□□ -1.83
PAXBP1-209ENST00000497873 SMIM11BQ8TCY0 68 aa3.63□□□□□ -1.83
PAXBP1-209ENST00000497873 IGLV4-60A0A075B6I1 120 aa3.62□□□□□ -1.83
PAXBP1-209ENST00000497873 IGKV2-28A0A075B6P5 120 aa3.62□□□□□ -1.83
PAXBP1-209ENST00000497873 IGKV2D-28P01615 120 aa3.62□□□□□ -1.83
PAXBP1-209ENST00000497873 SS18Q15532 418 aa3.62□□□□□ -1.83
PAXBP1-209ENST00000497873 KPRPQ5T749 579 aaPredicted RBP3.62□□□□□ -1.83
PAXBP1-209ENST00000497873 ENHOQ6UWT2 76 aa3.62□□□□□ -1.83
PAXBP1-209ENST00000497873 PRKDCP78527 4128 aaKnown RBP3.62□□□□□ -1.83
PAXBP1-209ENST00000497873 ORMDL1Q9P0S3 153 aa3.61□□□□□ -1.83
PAXBP1-209ENST00000497873 LECT2O14960 151 aa3.61□□□□□ -1.83
PAXBP1-209ENST00000497873 ATP5EP56381 51 aaPredicted RBP3.61□□□□□ -1.83
PAXBP1-209ENST00000497873 ST20-AS1Q8NBB2 130 aa3.61□□□□□ -1.83
PAXBP1-209ENST00000497873 IGHV3-73A0A0B4J1V6 119 aa3.6□□□□□ -1.83
PAXBP1-209ENST00000497873 TRBV7-6A0A0J9YX20 115 aa3.6□□□□□ -1.83
PAXBP1-209ENST00000497873 TRBV6-4A0A1B0GX49 114 aa3.6□□□□□ -1.83
PAXBP1-209ENST00000497873 JMJD7-PLA2G4BH0Y9G9 81 aa3.6□□□□□ -1.83
PAXBP1-209ENST00000497873 MIFP14174 115 aa3.6□□□□□ -1.83
PAXBP1-209ENST00000497873 LCE3EQ5T5B0 92 aa3.6□□□□□ -1.83
PAXBP1-209ENST00000497873 BRK1Q8WUW1 75 aa3.6□□□□□ -1.83
PAXBP1-209ENST00000497873 WFDC10AQ9H1F0 79 aa3.6□□□□□ -1.83
PAXBP1-209ENST00000497873 NDUFC1O43677 76 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms