RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 IGLV7-43P04211 117 aa12.3□□□□□ -0.44
CTSD-206ENST00000497544 CBY1Q9Y3M2 126 aa12.3□□□□□ -0.44
CTSD-206ENST00000497544 PRYO14603 147 aa12.29□□□□□ -0.44
CTSD-206ENST00000497544 HNRNPA3P51991 378 aaKnown RBP12.29□□□□□ -0.44
CTSD-206ENST00000497544 LINC00337Q8N6G1 96 aa12.29□□□□□ -0.44
CTSD-206ENST00000497544 TRAV13-2A0A0B4J235 113 aa12.28□□□□□ -0.44
CTSD-206ENST00000497544 A6NDN8 102 aa12.28□□□□□ -0.44
CTSD-206ENST00000497544 CEND1Q8N111 149 aa12.28□□□□□ -0.44
CTSD-206ENST00000497544 UBE2AP49459 152 aa12.26□□□□□ -0.45
CTSD-206ENST00000497544 HSD52Q0P140 79 aa12.26□□□□□ -0.45
CTSD-206ENST00000497544 FAM19A1Q7Z5A9 133 aa12.26□□□□□ -0.45
CTSD-206ENST00000497544 LRP2P98164 4655 aa12.26□□□□□ -0.45
CTSD-206ENST00000497544 TRAV23DV6A0A075B6W5 121 aa12.25□□□□□ -0.45
CTSD-206ENST00000497544 TSTD3H0UI37 97 aa12.24□□□□□ -0.45
CTSD-206ENST00000497544 RPL28P46779 137 aaKnown RBP12.24□□□□□ -0.45
CTSD-206ENST00000497544 TMEM238LA0A1B0GVL6 79 aa12.23□□□□□ -0.45
CTSD-206ENST00000497544 ETDCA0A1B0GVM5 59 aa12.23□□□□□ -0.45
CTSD-206ENST00000497544 A6NJY4 79 aa12.23□□□□□ -0.45
CTSD-206ENST00000497544 ZNF861PO60384 105 aa12.23□□□□□ -0.45
CTSD-206ENST00000497544 SPINK6Q6UWN8 80 aa12.23□□□□□ -0.45
CTSD-206ENST00000497544 SPRR1AP35321 89 aa12.22□□□□□ -0.45
CTSD-206ENST00000497544 HINT1P49773 126 aaPredicted RBP12.21□□□□□ -0.45
CTSD-206ENST00000497544 ZNF73O43830 326 aaPredicted RBP12.2□□□□□ -0.46
CTSD-206ENST00000497544 PRLHP81277 87 aa12.2□□□□□ -0.46
CTSD-206ENST00000497544 RAB37Q96AX2 223 aa12.2□□□□□ -0.46
CTSD-206ENST00000497544 KRTAP9-2Q9BYQ4 174 aa12.2□□□□□ -0.46
CTSD-206ENST00000497544 CFC1BP0CG36 223 aa12.19□□□□□ -0.46
CTSD-206ENST00000497544 CFC1P0CG37 223 aa12.19□□□□□ -0.46
CTSD-206ENST00000497544 FXYD2P54710 66 aa12.19□□□□□ -0.46
CTSD-206ENST00000497544 DIRC1Q969H9 104 aa12.19□□□□□ -0.46
CTSD-206ENST00000497544 PKHD1L1Q86WI1 4243 aa12.19□□□□□ -0.46
CTSD-206ENST00000497544 KRTAP4-16G5E9R7 235 aaPredicted RBP12.17□□□□□ -0.46
CTSD-206ENST00000497544 RPL13AP40429 203 aaKnown RBP12.17□□□□□ -0.46
CTSD-206ENST00000497544 A0A0B4J2C4 111 aa12.16□□□□□ -0.46
CTSD-206ENST00000497544 H0Y9J4 135 aa12.16□□□□□ -0.46
CTSD-206ENST00000497544 CTAG1AP78358 180 aa12.16□□□□□ -0.46
CTSD-206ENST00000497544 KRTAP13-1Q8IUC0 172 aa12.16□□□□□ -0.46
CTSD-206ENST00000497544 B5MCH6 92 aa12.15□□□□□ -0.46
CTSD-206ENST00000497544 C6orf99Q4VX62 202 aa12.15□□□□□ -0.46
CTSD-206ENST00000497544 SMIM11BQ8TCY0 68 aa12.15□□□□□ -0.46
CTSD-206ENST00000497544 KRTAP9-6A0A140TA67 174 aa12.14□□□□□ -0.47
CTSD-206ENST00000497544 HIGD2AQ9BW72 106 aa12.14□□□□□ -0.47
CTSD-206ENST00000497544 BVES-AS1Q5T3Y7 98 aa12.13□□□□□ -0.47
CTSD-206ENST00000497544 NHP2Q9NX24 153 aaKnown RBP12.13□□□□□ -0.47
CTSD-206ENST00000497544 Q6ZRX8 168 aa12.12□□□□□ -0.47
CTSD-206ENST00000497544 PRO1854Q9UHT4 67 aa12.12□□□□□ -0.47
CTSD-206ENST00000497544 H7C2G1 150 aa12.11□□□□□ -0.47
CTSD-206ENST00000497544 OXTP01178 125 aa12.11□□□□□ -0.47
CTSD-206ENST00000497544 COX7BP24311 80 aa12.11□□□□□ -0.47
CTSD-206ENST00000497544 M0R143 59 aa12.1□□□□□ -0.47
CTSD-206ENST00000497544 TRBV7-6A0A0J9YX20 115 aa12.09□□□□□ -0.47
CTSD-206ENST00000497544 VAMP3Q15836 100 aa12.09□□□□□ -0.47
CTSD-206ENST00000497544 SMCR5Q8TEV8 140 aa12.09□□□□□ -0.47
CTSD-206ENST00000497544 A0A1B0GWB2 263 aa12.08□□□□□ -0.48
CTSD-206ENST00000497544 ELOF1P60002 83 aaKnown RBP12.07□□□□□ -0.48
CTSD-206ENST00000497544 Q1RN00 199 aa12.07□□□□□ -0.48
CTSD-206ENST00000497544 Q9BRP9 147 aa12.06□□□□□ -0.48
CTSD-206ENST00000497544 DHRS4-AS1Q9P1J3 65 aa12.05□□□□□ -0.48
CTSD-206ENST00000497544 K7ERJ3 54 aa12.03□□□□□ -0.48
CTSD-206ENST00000497544 ERC2-IT1O76042 136 aa12.02□□□□□ -0.49
CTSD-206ENST00000497544 ZNF706Q9Y5V0 76 aaPredicted RBP12.02□□□□□ -0.49
CTSD-206ENST00000497544 TNXBP22105 4242 aa12.02□□□□□ -0.49
CTSD-206ENST00000497544 SLC25A20O43772 301 aa12□□□□□ -0.49
CTSD-206ENST00000497544 KRTAP1-4P0C5Y4 121 aa11.98□□□□□ -0.49
CTSD-206ENST00000497544 BATFQ16520 125 aa11.98□□□□□ -0.49
CTSD-206ENST00000497544 LINC01600Q96MT4 127 aa11.98□□□□□ -0.49
CTSD-206ENST00000497544 SPRR4Q96PI1 79 aa11.98□□□□□ -0.49
CTSD-206ENST00000497544 H0YGX0 51 aa11.97□□□□□ -0.49
CTSD-206ENST00000497544 PSMB2P49721 201 aa11.97□□□□□ -0.49
CTSD-206ENST00000497544 LINC00575Q6W349 94 aa11.96□□□□□ -0.49
CTSD-206ENST00000497544 TSPAN13O95857 204 aa11.95□□□□□ -0.5
CTSD-206ENST00000497544 GAGE2AQ6NT46 116 aa11.95□□□□□ -0.5
CTSD-206ENST00000497544 ANAPC11Q9NYG5 84 aa11.95□□□□□ -0.5
CTSD-206ENST00000497544 COX6CP09669 75 aa11.94□□□□□ -0.5
CTSD-206ENST00000497544 hADV29S1A0JD25 119 aa11.93□□□□□ -0.5
CTSD-206ENST00000497544 TRIAP1O43715 76 aa11.93□□□□□ -0.5
CTSD-206ENST00000497544 SNCGO76070 127 aa11.93□□□□□ -0.5
CTSD-206ENST00000497544 ST20-AS1Q8NBB2 130 aa11.93□□□□□ -0.5
CTSD-206ENST00000497544 CRYGAP11844 174 aa11.92□□□□□ -0.5
CTSD-206ENST00000497544 PRR26Q8N8Z3 221 aa11.92□□□□□ -0.5
CTSD-206ENST00000497544 PCP4L1A6NKN8 68 aa11.91□□□□□ -0.5
CTSD-206ENST00000497544 FAM229BQ4G0N7 80 aa11.91□□□□□ -0.5
CTSD-206ENST00000497544 DEFB105AQ8NG35 78 aa11.9□□□□□ -0.5
CTSD-206ENST00000497544 SCGB1C2P0DMR2 95 aa11.89□□□□□ -0.51
CTSD-206ENST00000497544 LINC00483Q53H64 154 aa11.88□□□□□ -0.51
CTSD-206ENST00000497544 A0A087X002 238 aa11.87□□□□□ -0.51
CTSD-206ENST00000497544 KRTAP10-8P60410 259 aa11.87□□□□□ -0.51
CTSD-206ENST00000497544 MT1HL1P0DM35 61 aa11.86□□□□□ -0.51
CTSD-206ENST00000497544 TEX49A0A1B0GTD5 131 aa11.85□□□□□ -0.51
CTSD-206ENST00000497544 Q6ZQY7 126 aa11.85□□□□□ -0.51
CTSD-206ENST00000497544 FAM218AQ96MZ4 157 aa11.85□□□□□ -0.51
CTSD-206ENST00000497544 A0A1B0GX51 115 aa11.84□□□□□ -0.51
CTSD-206ENST00000497544 SPRR1BP22528 89 aa11.84□□□□□ -0.51
CTSD-206ENST00000497544 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.84□□□□□ -0.51
CTSD-206ENST00000497544 TYMSOSQ8TAI1 123 aa11.84□□□□□ -0.51
CTSD-206ENST00000497544 CLEC2BQ92478 149 aa11.84□□□□□ -0.51
CTSD-206ENST00000497544 SNHG12Q9BXW3 62 aa11.84□□□□□ -0.51
CTSD-206ENST00000497544 NAA38Q9BRA0 125 aaKnown RBP11.82□□□□□ -0.52
CTSD-206ENST00000497544 FAT4Q6V0I7 4981 aa11.81□□□□□ -0.52
CTSD-206ENST00000497544 IGLV5-48A0A075B6I7 105 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms