RNA–Protein interactions for RNA: ENST00000497269.5

MSH5-219, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-219ENST00000497269 F8VRH5 84 aa3.4□□□□□ -1.87
MSH5-219ENST00000497269 NUPR1O60356 82 aa3.4□□□□□ -1.87
MSH5-219ENST00000497269 COX19Q49B96 90 aa3.4□□□□□ -1.87
MSH5-219ENST00000497269 HIST3H2BBQ8N257 126 aa3.4□□□□□ -1.87
MSH5-219ENST00000497269 C3orf22Q8N5N4 141 aa3.4□□□□□ -1.87
MSH5-219ENST00000497269 COX7B2Q8TF08 81 aa3.4□□□□□ -1.87
MSH5-219ENST00000497269 ZNF625Q96I27 306 aaPredicted RBP3.4□□□□□ -1.87
MSH5-219ENST00000497269 SCGB3A1Q96QR1 104 aa3.4□□□□□ -1.87
MSH5-219ENST00000497269 A0A0U1RQV1 116 aa3.39□□□□□ -1.87
MSH5-219ENST00000497269 NDUFA6P56556 154 aa3.39□□□□□ -1.87
MSH5-219ENST00000497269 HERVK_113P63121 156 aa3.39□□□□□ -1.87
MSH5-219ENST00000497269 JOSD1Q15040 202 aaPredicted RBP3.39□□□□□ -1.87
MSH5-219ENST00000497269 ORMDL2Q53FV1 153 aa3.39□□□□□ -1.87
MSH5-219ENST00000497269 PYY3Q5JQD4 70 aa3.39□□□□□ -1.87
MSH5-219ENST00000497269 ATP5L2Q7Z4Y8 100 aa3.39□□□□□ -1.87
MSH5-219ENST00000497269 FAM19A1Q7Z5A9 133 aa3.39□□□□□ -1.87
MSH5-219ENST00000497269 LINC00304Q8N9R0 145 aa3.39□□□□□ -1.87
MSH5-219ENST00000497269 NKAPP1Q8N9T2 125 aa3.39□□□□□ -1.87
MSH5-219ENST00000497269 IGKV2D-26A0A0A0MRZ7 120 aa3.38□□□□□ -1.87
MSH5-219ENST00000497269 TRGC2P03986 189 aa3.38□□□□□ -1.87
MSH5-219ENST00000497269 TOMM6Q96B49 74 aa3.38□□□□□ -1.87
MSH5-219ENST00000497269 HIST1H2BLQ99880 126 aa3.38□□□□□ -1.87
MSH5-219ENST00000497269 FAT4Q6V0I7 4981 aa3.38□□□□□ -1.87
MSH5-219ENST00000497269 A0A1B0GWB2 263 aa3.37□□□□□ -1.87
MSH5-219ENST00000497269 DDTP30046 118 aa3.37□□□□□ -1.87
MSH5-219ENST00000497269 DAND5Q8N907 189 aa3.37□□□□□ -1.87
MSH5-219ENST00000497269 Q8NDZ9 215 aa3.37□□□□□ -1.87
MSH5-219ENST00000497269 HIGD2AQ9BW72 106 aa3.37□□□□□ -1.87
MSH5-219ENST00000497269 CST9LQ9H4G1 147 aa3.37□□□□□ -1.87
MSH5-219ENST00000497269 NXT2Q9NPJ8 142 aaKnown RBP3.37□□□□□ -1.87
MSH5-219ENST00000497269 LAMTOR2Q9Y2Q5 125 aa3.37□□□□□ -1.87
MSH5-219ENST00000497269 TINCRA0A1B0GVN0 87 aa3.36□□□□□ -1.87
MSH5-219ENST00000497269 FABP4P15090 132 aa3.36□□□□□ -1.87
MSH5-219ENST00000497269 SEC11AP67812 179 aa3.36□□□□□ -1.87
MSH5-219ENST00000497269 PMCHL1Q16048 86 aa3.36□□□□□ -1.87
MSH5-219ENST00000497269 PDZD11Q5EBL8 140 aa3.36□□□□□ -1.87
MSH5-219ENST00000497269 FAM19A3Q7Z5A8 133 aa3.36□□□□□ -1.87
MSH5-219ENST00000497269 KRTAP13-1Q8IUC0 172 aa3.36□□□□□ -1.87
MSH5-219ENST00000497269 TMEM126AQ9H061 195 aa3.36□□□□□ -1.87
MSH5-219ENST00000497269 TP73-AS1Q9UF72 201 aa3.36□□□□□ -1.87
MSH5-219ENST00000497269 ATP5LO75964 103 aa3.35□□□□□ -1.87
MSH5-219ENST00000497269 PMVKQ15126 192 aa3.35□□□□□ -1.87
MSH5-219ENST00000497269 PLEKHB2Q96CS7 222 aa3.35□□□□□ -1.87
MSH5-219ENST00000497269 C14orf144Q96I85 54 aa3.35□□□□□ -1.87
MSH5-219ENST00000497269 TIMM17AQ99595 171 aa3.35□□□□□ -1.87
MSH5-219ENST00000497269 SND1-IT1Q9HBX3 110 aa3.35□□□□□ -1.87
MSH5-219ENST00000497269 M0R378 163 aa3.34□□□□□ -1.87
MSH5-219ENST00000497269 CXCL5P42830 114 aa3.34□□□□□ -1.87
MSH5-219ENST00000497269 FA2HQ7L5A8 372 aa3.34□□□□□ -1.87
MSH5-219ENST00000497269 GNB1LQ9BYB4 327 aa3.34□□□□□ -1.87
MSH5-219ENST00000497269 KRTAP4-1Q9BYQ7 146 aa3.34□□□□□ -1.87
MSH5-219ENST00000497269 ERG28Q9UKR5 140 aa3.34□□□□□ -1.87
MSH5-219ENST00000497269 TRAPPC1Q9Y5R8 145 aa3.34□□□□□ -1.87
MSH5-219ENST00000497269 C20orf202A1L168 122 aa3.33□□□□□ -1.88
MSH5-219ENST00000497269 NCR3O14931 201 aa3.33□□□□□ -1.88
MSH5-219ENST00000497269 ZNF22P17026 224 aaPredicted RBP3.33□□□□□ -1.88
MSH5-219ENST00000497269 G0S2P27469 103 aa3.33□□□□□ -1.88
MSH5-219ENST00000497269 LINC00158P58513 81 aa3.33□□□□□ -1.88
MSH5-219ENST00000497269 FAM229BQ4G0N7 80 aa3.33□□□□□ -1.88
MSH5-219ENST00000497269 LINC00337Q8N6G1 96 aa3.33□□□□□ -1.88
MSH5-219ENST00000497269 H3BRM9 83 aa3.32□□□□□ -1.88
MSH5-219ENST00000497269 K7EMI3 77 aa3.32□□□□□ -1.88
MSH5-219ENST00000497269 M0R143 59 aa3.32□□□□□ -1.88
MSH5-219ENST00000497269 TPRXLQ17RH7 258 aa3.32□□□□□ -1.88
MSH5-219ENST00000497269 KRTAP13-3Q3SY46 172 aa3.32□□□□□ -1.88
MSH5-219ENST00000497269 TMEM170BQ5T4T1 132 aa3.32□□□□□ -1.88
MSH5-219ENST00000497269 BAGE3Q86Y29 109 aa3.32□□□□□ -1.88
MSH5-219ENST00000497269 SMCR5Q8TEV8 140 aa3.32□□□□□ -1.88
MSH5-219ENST00000497269 MUC17Q685J3 4493 aa3.32□□□□□ -1.88
MSH5-219ENST00000497269 A0A096LNJ9 63 aa3.31□□□□□ -1.88
MSH5-219ENST00000497269 C11orf86A6NJI1 115 aa3.31□□□□□ -1.88
MSH5-219ENST00000497269 IGLC3P0DOY3 106 aa3.31□□□□□ -1.88
MSH5-219ENST00000497269 SPRR4Q96PI1 79 aa3.31□□□□□ -1.88
MSH5-219ENST00000497269 MIEN1Q9BRT3 115 aa3.31□□□□□ -1.88
MSH5-219ENST00000497269 LINC00614P0C842 121 aa3.3□□□□□ -1.88
MSH5-219ENST00000497269 SMIM13P0DJ93 91 aa3.3□□□□□ -1.88
MSH5-219ENST00000497269 Q8N9L7 120 aa3.3□□□□□ -1.88
MSH5-219ENST00000497269 VAMP8Q9BV40 100 aa3.3□□□□□ -1.88
MSH5-219ENST00000497269 LINC01546A6NGU7 62 aa3.29□□□□□ -1.88
MSH5-219ENST00000497269 ERC2-IT1O76042 136 aa3.29□□□□□ -1.88
MSH5-219ENST00000497269 COL5A1-AS1Q5SY13 56 aa3.29□□□□□ -1.88
MSH5-219ENST00000497269 LCE3AQ5TA76 89 aa3.29□□□□□ -1.88
MSH5-219ENST00000497269 BOD1L2Q8IYS8 172 aa3.29□□□□□ -1.88
MSH5-219ENST00000497269 UQCR10Q9UDW1 63 aa3.29□□□□□ -1.88
MSH5-219ENST00000497269 CHTOPQ9Y3Y2 248 aaKnown RBP3.29□□□□□ -1.88
MSH5-219ENST00000497269 ETDCA0A1B0GVM5 59 aa3.28□□□□□ -1.88
MSH5-219ENST00000497269 H0Y8G0 127 aa3.28□□□□□ -1.88
MSH5-219ENST00000497269 MOBPQ13875 183 aa3.28□□□□□ -1.88
MSH5-219ENST00000497269 MEIG1Q5JSS6 88 aa3.28□□□□□ -1.88
MSH5-219ENST00000497269 C18orf32Q8TCD1 76 aa3.28□□□□□ -1.88
MSH5-219ENST00000497269 PRO1933Q9H354 126 aa3.28□□□□□ -1.88
MSH5-219ENST00000497269 TRBV10-3A0A0K0K1G6 114 aa3.27□□□□□ -1.89
MSH5-219ENST00000497269 A0A1B0GV90 55 aa3.27□□□□□ -1.89
MSH5-219ENST00000497269 HBDP02042 147 aa3.27□□□□□ -1.89
MSH5-219ENST00000497269 COX17Q14061 63 aa3.27□□□□□ -1.89
MSH5-219ENST00000497269 SPAG11AQ6PDA7 123 aa3.27□□□□□ -1.89
MSH5-219ENST00000497269 HRCT1Q6UXD1 115 aa3.27□□□□□ -1.89
MSH5-219ENST00000497269 MIR7-3HGQ8N6C7 128 aa3.27□□□□□ -1.89
MSH5-219ENST00000497269 CHCHD1Q96BP2 118 aaKnown RBP3.27□□□□□ -1.89
MSH5-219ENST00000497269 SNHG12Q9BXW3 62 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms