RNA–Protein interactions for RNA: ENST00000497089.1

HOXA9-206, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 1,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-206ENST00000497089 Q9UF83 564 aa4.53□□□□□ -1.69
HOXA9-206ENST00000497089 IGHV3OR16-12A0A075B7B8 117 aa4.52□□□□□ -1.69
HOXA9-206ENST00000497089 GNRH2O43555 120 aa4.52□□□□□ -1.69
HOXA9-206ENST00000497089 ENHOQ6UWT2 76 aa4.52□□□□□ -1.69
HOXA9-206ENST00000497089 Q8N9P0 234 aaPredicted RBP4.52□□□□□ -1.69
HOXA9-206ENST00000497089 ALMS1Q8TCU4 4167 aa4.51□□□□□ -1.69
HOXA9-206ENST00000497089 EPPK1P58107 5090 aaKnown RBP4.51□□□□□ -1.69
HOXA9-206ENST00000497089 LYRM9A8MSI8 78 aa4.51□□□□□ -1.69
HOXA9-206ENST00000497089 KLLNB2CW77 178 aa4.51□□□□□ -1.69
HOXA9-206ENST00000497089 H3BQ85 93 aa4.51□□□□□ -1.69
HOXA9-206ENST00000497089 INSP01308 110 aa4.51□□□□□ -1.69
HOXA9-206ENST00000497089 ESRGQ1W209 222 aa4.51□□□□□ -1.69
HOXA9-206ENST00000497089 SPINK13Q1W4C9 94 aa4.51□□□□□ -1.69
HOXA9-206ENST00000497089 FAM19A3Q7Z5A8 133 aa4.51□□□□□ -1.69
HOXA9-206ENST00000497089 TMEM256-PLSCR3K7ERE1 68 aa4.5□□□□□ -1.69
HOXA9-206ENST00000497089 CXCL6P80162 114 aa4.5□□□□□ -1.69
HOXA9-206ENST00000497089 FAM74A4Q5TZK3 123 aa4.5□□□□□ -1.69
HOXA9-206ENST00000497089 MRPL55Q7Z7F7 128 aaKnown RBP4.5□□□□□ -1.69
HOXA9-206ENST00000497089 LINC00167Q96N53 147 aa4.5□□□□□ -1.69
HOXA9-206ENST00000497089 IGHV3-16A0A0C4DH30 117 aa4.49□□□□□ -1.69
HOXA9-206ENST00000497089 NCR3O14931 201 aa4.49□□□□□ -1.69
HOXA9-206ENST00000497089 PDE6GP18545 87 aa4.49□□□□□ -1.69
HOXA9-206ENST00000497089 SOSTDC1Q6X4U4 206 aa4.49□□□□□ -1.69
HOXA9-206ENST00000497089 RMI2Q96E14 147 aa4.49□□□□□ -1.69
HOXA9-206ENST00000497089 ZNF625Q96I27 306 aaPredicted RBP4.49□□□□□ -1.69
HOXA9-206ENST00000497089 LINC00474Q9P2X8 69 aa4.49□□□□□ -1.69
HOXA9-206ENST00000497089 HYDINQ4G0P3 5121 aa4.48□□□□□ -1.69
HOXA9-206ENST00000497089 BIRC6Q9NR09 4857 aa4.48□□□□□ -1.69
HOXA9-206ENST00000497089 A0A087WYN8 130 aa4.48□□□□□ -1.69
HOXA9-206ENST00000497089 LECT2O14960 151 aa4.48□□□□□ -1.69
HOXA9-206ENST00000497089 DAD1P61803 113 aa4.48□□□□□ -1.69
HOXA9-206ENST00000497089 MIR7-3HGQ8N6C7 128 aa4.48□□□□□ -1.69
HOXA9-206ENST00000497089 LINC00612Q8N6U2 182 aa4.48□□□□□ -1.69
HOXA9-206ENST00000497089 C16orf74Q96GX8 76 aa4.48□□□□□ -1.69
HOXA9-206ENST00000497089 SND1-IT1Q9HBX3 110 aa4.48□□□□□ -1.69
HOXA9-206ENST00000497089 CDKN2A-AS1Q9UH64 79 aa4.48□□□□□ -1.69
HOXA9-206ENST00000497089 NACAE9PAV3 2078 aa4.47□□□□□ -1.69
HOXA9-206ENST00000497089 PRM2P04554 102 aa4.47□□□□□ -1.69
HOXA9-206ENST00000497089 FUSP35637 526 aaKnown RBP eCLIP4.47□□□□□ -1.69
HOXA9-206ENST00000497089 Q6ZR54 194 aa4.47□□□□□ -1.69
HOXA9-206ENST00000497089 SMIM11BQ8TCY0 68 aa4.47□□□□□ -1.69
HOXA9-206ENST00000497089 FAM104AQ969W3 186 aa4.47□□□□□ -1.69
HOXA9-206ENST00000497089 SNURFQ9Y675 71 aa4.47□□□□□ -1.69
HOXA9-206ENST00000497089 IGHV1OR15-1A0A075B7D0 117 aa4.46□□□□□ -1.7
HOXA9-206ENST00000497089 LOC110117498A0A087WWA1 95 aa4.46□□□□□ -1.7
HOXA9-206ENST00000497089 TRBV7-4A0A0J9YYF1 115 aa4.46□□□□□ -1.7
HOXA9-206ENST00000497089 A0A1B0GVY2 172 aa4.46□□□□□ -1.7
HOXA9-206ENST00000497089 IGKV2-29A2NJV5 120 aaPredicted RBP4.46□□□□□ -1.7
HOXA9-206ENST00000497089 DEFB130BP0DP73 79 aa4.46□□□□□ -1.7
HOXA9-206ENST00000497089 DEFB130AP0DP74 79 aa4.46□□□□□ -1.7
HOXA9-206ENST00000497089 RPL36AP83881 106 aaKnown RBP4.46□□□□□ -1.7
HOXA9-206ENST00000497089 SS18Q15532 418 aa4.46□□□□□ -1.7
HOXA9-206ENST00000497089 Q1T7F1 81 aa4.46□□□□□ -1.7
HOXA9-206ENST00000497089 LINC00467Q9BRT7 94 aa4.46□□□□□ -1.7
HOXA9-206ENST00000497089 CHCHD7Q9BUK0 85 aa4.46□□□□□ -1.7
HOXA9-206ENST00000497089 VPS13DQ5THJ4 4388 aa4.46□□□□□ -1.7
HOXA9-206ENST00000497089 KMT2AQ03164 3969 aa4.45□□□□□ -1.7
HOXA9-206ENST00000497089 SMIM1B2RUZ4 78 aa4.45□□□□□ -1.7
HOXA9-206ENST00000497089 HTN3P15516 51 aa4.45□□□□□ -1.7
HOXA9-206ENST00000497089 NREPQ16612 68 aa4.45□□□□□ -1.7
HOXA9-206ENST00000497089 LINC00337Q8N6G1 96 aa4.45□□□□□ -1.7
HOXA9-206ENST00000497089 TMEM254Q8TBM7 123 aa4.45□□□□□ -1.7
HOXA9-206ENST00000497089 H3BNG1 76 aa4.44□□□□□ -1.7
HOXA9-206ENST00000497089 RTL8CO15255 209 aa4.44□□□□□ -1.7
HOXA9-206ENST00000497089 HTN1P15515 57 aa4.44□□□□□ -1.7
HOXA9-206ENST00000497089 LINC01547P58512 204 aaPredicted RBP4.44□□□□□ -1.7
HOXA9-206ENST00000497089 C9orf129Q5T035 196 aaKnown RBP4.44□□□□□ -1.7
HOXA9-206ENST00000497089 DEFB104AQ8WTQ1 72 aa4.44□□□□□ -1.7
HOXA9-206ENST00000497089 NOP10Q9NPE3 64 aaKnown RBP4.44□□□□□ -1.7
HOXA9-206ENST00000497089 IGKV2D-30A0A075B6S6 120 aa4.43□□□□□ -1.7
HOXA9-206ENST00000497089 NDUFS5O43920 106 aa4.43□□□□□ -1.7
HOXA9-206ENST00000497089 UBE2BP63146 152 aa4.43□□□□□ -1.7
HOXA9-206ENST00000497089 LINC00242Q5T6M2 205 aa4.43□□□□□ -1.7
HOXA9-206ENST00000497089 UBE2DNLQ8IWF7 75 aa4.43□□□□□ -1.7
HOXA9-206ENST00000497089 C11orf72Q8NBR9 251 aa4.43□□□□□ -1.7
HOXA9-206ENST00000497089 FRAS1Q86XX4 4008 aa4.43□□□□□ -1.7
HOXA9-206ENST00000497089 MUC4Q99102 2169 aa4.42□□□□□ -1.7
HOXA9-206ENST00000497089 IGKV2-28A0A075B6P5 120 aa4.42□□□□□ -1.7
HOXA9-206ENST00000497089 M0R2N4 97 aa4.42□□□□□ -1.7
HOXA9-206ENST00000497089 IGKV2D-28P01615 120 aa4.42□□□□□ -1.7
HOXA9-206ENST00000497089 RNASE13Q5GAN3 156 aaKnown RBP4.42□□□□□ -1.7
HOXA9-206ENST00000497089 Q6ZQT0 140 aa4.42□□□□□ -1.7
HOXA9-206ENST00000497089 Q8N814 137 aa4.42□□□□□ -1.7
HOXA9-206ENST00000497089 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.41□□□□□ -1.7
HOXA9-206ENST00000497089 TRBV6-4A0A1B0GX49 114 aa4.41□□□□□ -1.7
HOXA9-206ENST00000497089 CCL18P55774 89 aa4.41□□□□□ -1.7
HOXA9-206ENST00000497089 LINC00158P58513 81 aa4.41□□□□□ -1.7
HOXA9-206ENST00000497089 HAMPP81172 84 aa4.41□□□□□ -1.7
HOXA9-206ENST00000497089 Q6ZTI0 123 aa4.41□□□□□ -1.7
HOXA9-206ENST00000497089 Q6ZVQ6 151 aa4.41□□□□□ -1.7
HOXA9-206ENST00000497089 KTN1-AS1Q86SY8 53 aa4.41□□□□□ -1.7
HOXA9-206ENST00000497089 C6orf223Q8N319 242 aa4.41□□□□□ -1.7
HOXA9-206ENST00000497089 COX7B2Q8TF08 81 aa4.41□□□□□ -1.7
HOXA9-206ENST00000497089 LINC00588Q9Y4M8 146 aa4.41□□□□□ -1.7
HOXA9-206ENST00000497089 DNAH10Q8IVF4 4471 aa4.41□□□□□ -1.7
HOXA9-206ENST00000497089 IGHV3-38A0A0C4DH36 116 aa4.4□□□□□ -1.7
HOXA9-206ENST00000497089 NBDYA0A0U1RRE5 68 aa4.4□□□□□ -1.7
HOXA9-206ENST00000497089 hDV103S1A0JD37 113 aa4.4□□□□□ -1.7
HOXA9-206ENST00000497089 COX6A2Q02221 97 aa4.4□□□□□ -1.7
HOXA9-206ENST00000497089 FAM229BQ4G0N7 80 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms