RNA–Protein interactions for RNA: ENST00000496530.1

SMARCD3-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-215ENST00000496530 VPREB1P12018 145 aa5.12□□□□□ -1.59
SMARCD3-215ENST00000496530 MRPL55Q7Z7F7 128 aaKnown RBP5.12□□□□□ -1.59
SMARCD3-215ENST00000496530 ARL17AQ8IVW1 177 aa5.12□□□□□ -1.59
SMARCD3-215ENST00000496530 Q8NDZ9 215 aa5.12□□□□□ -1.59
SMARCD3-215ENST00000496530 NHP2Q9NX24 153 aaKnown RBP5.12□□□□□ -1.59
SMARCD3-215ENST00000496530 UBR4Q5T4S7 5183 aa5.12□□□□□ -1.59
SMARCD3-215ENST00000496530 CFC1BP0CG36 223 aa5.11□□□□□ -1.59
SMARCD3-215ENST00000496530 CFC1P0CG37 223 aa5.11□□□□□ -1.59
SMARCD3-215ENST00000496530 FXYD2P54710 66 aa5.11□□□□□ -1.59
SMARCD3-215ENST00000496530 Q1RN00 199 aa5.11□□□□□ -1.59
SMARCD3-215ENST00000496530 TRBV10-3A0A0K0K1G6 114 aa5.1□□□□□ -1.59
SMARCD3-215ENST00000496530 KRTAP7-1Q8IUC3 87 aa5.1□□□□□ -1.59
SMARCD3-215ENST00000496530 TMEM126AQ9H061 195 aa5.1□□□□□ -1.59
SMARCD3-215ENST00000496530 CDIP1Q9H305 208 aa5.1□□□□□ -1.59
SMARCD3-215ENST00000496530 PRO1854Q9UHT4 67 aa5.1□□□□□ -1.59
SMARCD3-215ENST00000496530 APOBP04114 4563 aaKnown RBP5.1□□□□□ -1.59
SMARCD3-215ENST00000496530 HSPG2P98160 4391 aa5.09□□□□□ -1.59
SMARCD3-215ENST00000496530 TRBV10-2A0A0K0K1G8 114 aa5.09□□□□□ -1.59
SMARCD3-215ENST00000496530 OXTP01178 125 aa5.09□□□□□ -1.59
SMARCD3-215ENST00000496530 RPL13AP40429 203 aaKnown RBP5.09□□□□□ -1.59
SMARCD3-215ENST00000496530 PSMB2P49721 201 aa5.09□□□□□ -1.59
SMARCD3-215ENST00000496530 CBY1Q9Y3M2 126 aa5.09□□□□□ -1.59
SMARCD3-215ENST00000496530 IGLV1-50A0A075B6I6 118 aa5.08□□□□□ -1.6
SMARCD3-215ENST00000496530 IGLV5-37A0A075B6J1 123 aa5.08□□□□□ -1.6
SMARCD3-215ENST00000496530 K7ERJ3 54 aa5.08□□□□□ -1.6
SMARCD3-215ENST00000496530 SCGB1C2P0DMR2 95 aa5.08□□□□□ -1.6
SMARCD3-215ENST00000496530 VAMP3Q15836 100 aa5.08□□□□□ -1.6
SMARCD3-215ENST00000496530 C1orf137Q5JT78 98 aa5.08□□□□□ -1.6
SMARCD3-215ENST00000496530 LINC00337Q8N6G1 96 aa5.08□□□□□ -1.6
SMARCD3-215ENST00000496530 ETDCA0A1B0GVM5 59 aa5.07□□□□□ -1.6
SMARCD3-215ENST00000496530 KRTAP29-1A8MX34 341 aaPredicted RBP5.07□□□□□ -1.6
SMARCD3-215ENST00000496530 KRTAP10-4P60372 401 aaPredicted RBP5.07□□□□□ -1.6
SMARCD3-215ENST00000496530 REG3GQ6UW15 175 aa5.07□□□□□ -1.6
SMARCD3-215ENST00000496530 FAM19A1Q7Z5A9 133 aa5.07□□□□□ -1.6
SMARCD3-215ENST00000496530 KRTAP9-9Q9BYP9 154 aa5.07□□□□□ -1.6
SMARCD3-215ENST00000496530 KRTAP9-4Q9BYQ2 154 aa5.07□□□□□ -1.6
SMARCD3-215ENST00000496530 TRAV23DV6A0A075B6W5 121 aa5.06□□□□□ -1.6
SMARCD3-215ENST00000496530 UBE2AP49459 152 aa5.06□□□□□ -1.6
SMARCD3-215ENST00000496530 SPINK6Q6UWN8 80 aa5.06□□□□□ -1.6
SMARCD3-215ENST00000496530 KRTAP11-1Q8IUC1 163 aa5.06□□□□□ -1.6
SMARCD3-215ENST00000496530 SMIM11BQ8TCY0 68 aa5.06□□□□□ -1.6
SMARCD3-215ENST00000496530 KRTAP4-12Q9BQ66 201 aa5.06□□□□□ -1.6
SMARCD3-215ENST00000496530 PPDPFQ9H3Y8 114 aa5.06□□□□□ -1.6
SMARCD3-215ENST00000496530 PSORS1C2Q9UIG4 136 aa5.06□□□□□ -1.6
SMARCD3-215ENST00000496530 A0A0B4J2C4 111 aa5.05□□□□□ -1.6
SMARCD3-215ENST00000496530 IGLV6-57P01721 117 aa5.05□□□□□ -1.6
SMARCD3-215ENST00000496530 NAA38Q9BRA0 125 aaKnown RBP5.05□□□□□ -1.6
SMARCD3-215ENST00000496530 PRYO14603 147 aa5.04□□□□□ -1.6
SMARCD3-215ENST00000496530 ZNF73O43830 326 aaPredicted RBP5.04□□□□□ -1.6
SMARCD3-215ENST00000496530 COX7BP24311 80 aa5.04□□□□□ -1.6
SMARCD3-215ENST00000496530 C6orf99Q4VX62 202 aa5.04□□□□□ -1.6
SMARCD3-215ENST00000496530 DIRC1Q969H9 104 aa5.04□□□□□ -1.6
SMARCD3-215ENST00000496530 SNHG12Q9BXW3 62 aa5.04□□□□□ -1.6
SMARCD3-215ENST00000496530 KCNQ1DNQ9H478 68 aa5.04□□□□□ -1.6
SMARCD3-215ENST00000496530 DNAH8Q96JB1 4490 aa5.04□□□□□ -1.6
SMARCD3-215ENST00000496530 SNCGO76070 127 aa5.03□□□□□ -1.6
SMARCD3-215ENST00000496530 COX6CP09669 75 aa5.03□□□□□ -1.6
SMARCD3-215ENST00000496530 COL5A1-AS1Q5SY13 56 aa5.03□□□□□ -1.6
SMARCD3-215ENST00000496530 SLC25A20O43772 301 aa5.02□□□□□ -1.61
SMARCD3-215ENST00000496530 BCE1O60756 84 aa5.02□□□□□ -1.61
SMARCD3-215ENST00000496530 PCP4P48539 62 aa5.02□□□□□ -1.61
SMARCD3-215ENST00000496530 A0A1B0GWB2 263 aa5.01□□□□□ -1.61
SMARCD3-215ENST00000496530 H3BUT2 72 aa5.01□□□□□ -1.61
SMARCD3-215ENST00000496530 TSPAN13O95857 204 aa5.01□□□□□ -1.61
SMARCD3-215ENST00000496530 IGLV7-43P04211 117 aa5.01□□□□□ -1.61
SMARCD3-215ENST00000496530 RPL28P46779 137 aaKnown RBP5.01□□□□□ -1.61
SMARCD3-215ENST00000496530 PRLHP81277 87 aa5.01□□□□□ -1.61
SMARCD3-215ENST00000496530 DEFB105AQ8NG35 78 aa5.01□□□□□ -1.61
SMARCD3-215ENST00000496530 SMCR5Q8TEV8 140 aa5.01□□□□□ -1.61
SMARCD3-215ENST00000496530 HIGD2AQ9BW72 106 aa5.01□□□□□ -1.61
SMARCD3-215ENST00000496530 KRTAP4-8A0A0G2JLE6 195 aa5□□□□□ -1.61
SMARCD3-215ENST00000496530 B5MCH6 92 aa5□□□□□ -1.61
SMARCD3-215ENST00000496530 H0YGX0 51 aa5□□□□□ -1.61
SMARCD3-215ENST00000496530 ABCA13Q86UQ4 5058 aa5□□□□□ -1.61
SMARCD3-215ENST00000496530 C9orf118A6NHY6 69 aa4.99□□□□□ -1.61
SMARCD3-215ENST00000496530 TAX1BP3O14907 124 aa4.99□□□□□ -1.61
SMARCD3-215ENST00000496530 TRIAP1O43715 76 aa4.99□□□□□ -1.61
SMARCD3-215ENST00000496530 TRBV7-6A0A0J9YX20 115 aa4.98□□□□□ -1.61
SMARCD3-215ENST00000496530 hADV29S1A0JD25 119 aa4.98□□□□□ -1.61
SMARCD3-215ENST00000496530 ZNF861PO60384 105 aa4.98□□□□□ -1.61
SMARCD3-215ENST00000496530 CLEC2BQ92478 149 aa4.98□□□□□ -1.61
SMARCD3-215ENST00000496530 LINC01600Q96MT4 127 aa4.98□□□□□ -1.61
SMARCD3-215ENST00000496530 VPS13BQ7Z7G8 4022 aa4.97□□□□□ -1.61
SMARCD3-215ENST00000496530 H0Y9J4 135 aa4.97□□□□□ -1.61
SMARCD3-215ENST00000496530 SPRR1AP35321 89 aa4.97□□□□□ -1.61
SMARCD3-215ENST00000496530 LINC00575Q6W349 94 aa4.97□□□□□ -1.61
SMARCD3-215ENST00000496530 DHRS4-AS1Q9P1J3 65 aa4.97□□□□□ -1.61
SMARCD3-215ENST00000496530 ERC2-IT1O76042 136 aa4.96□□□□□ -1.62
SMARCD3-215ENST00000496530 FABP2P12104 132 aa4.96□□□□□ -1.62
SMARCD3-215ENST00000496530 ELOF1P60002 83 aaKnown RBP4.96□□□□□ -1.62
SMARCD3-215ENST00000496530 Q6ZRX8 168 aa4.96□□□□□ -1.62
SMARCD3-215ENST00000496530 KRTAP4-16G5E9R7 235 aaPredicted RBP4.95□□□□□ -1.62
SMARCD3-215ENST00000496530 GAGE2AQ6NT46 116 aa4.95□□□□□ -1.62
SMARCD3-215ENST00000496530 Q9BRP9 147 aa4.95□□□□□ -1.62
SMARCD3-215ENST00000496530 FAT1Q14517 4588 aa4.95□□□□□ -1.62
SMARCD3-215ENST00000496530 A0A1W2PPM0 123 aa4.94□□□□□ -1.62
SMARCD3-215ENST00000496530 DNAL4O96015 105 aa4.94□□□□□ -1.62
SMARCD3-215ENST00000496530 ATXN8Q156A1 80 aa4.94□□□□□ -1.62
SMARCD3-215ENST00000496530 LYRM7Q5U5X0 104 aa4.94□□□□□ -1.62
SMARCD3-215ENST00000496530 ST20-AS1Q8NBB2 130 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms