RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 S100A12P80511 92 aa8.11□□□□□ -1.11
VTI1A-209ENST00000496445 ADAMTSL4-AS1Q5T5F5 129 aa8.11□□□□□ -1.11
VTI1A-209ENST00000496445 GAGE2AQ6NT46 116 aa8.11□□□□□ -1.11
VTI1A-209ENST00000496445 Q6ZRX8 168 aa8.11□□□□□ -1.11
VTI1A-209ENST00000496445 MIEN1Q9BRT3 115 aa8.11□□□□□ -1.11
VTI1A-209ENST00000496445 A0A0U1RQV1 116 aa8.09□□□□□ -1.11
VTI1A-209ENST00000496445 HIST1H2BKO60814 126 aa8.09□□□□□ -1.11
VTI1A-209ENST00000496445 HIST1H2BJP06899 126 aa8.09□□□□□ -1.11
VTI1A-209ENST00000496445 HIST1H2BOP23527 126 aa8.09□□□□□ -1.11
VTI1A-209ENST00000496445 HIST1H2BBP33778 126 aa8.09□□□□□ -1.11
VTI1A-209ENST00000496445 HIST1H2BDP58876 126 aa8.09□□□□□ -1.11
VTI1A-209ENST00000496445 HIST1H2BCP62807 126 aa8.09□□□□□ -1.11
VTI1A-209ENST00000496445 HIST2H2BEQ16778 126 aa8.09□□□□□ -1.11
VTI1A-209ENST00000496445 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.09□□□□□ -1.11
VTI1A-209ENST00000496445 HIST1H2BHQ93079 126 aa8.09□□□□□ -1.11
VTI1A-209ENST00000496445 HIST1H2BNQ99877 126 aa8.09□□□□□ -1.11
VTI1A-209ENST00000496445 HIST1H2BMQ99879 126 aa8.09□□□□□ -1.11
VTI1A-209ENST00000496445 TRAV23DV6A0A075B6W5 121 aa8.08□□□□□ -1.12
VTI1A-209ENST00000496445 SYS1-DBNDD2H3BUS1 97 aa8.08□□□□□ -1.12
VTI1A-209ENST00000496445 MOBPQ13875 183 aa8.08□□□□□ -1.12
VTI1A-209ENST00000496445 S100A7L2Q5SY68 101 aa8.08□□□□□ -1.12
VTI1A-209ENST00000496445 FP248Q71RG6 208 aaPredicted RBP8.08□□□□□ -1.12
VTI1A-209ENST00000496445 IGLV9-49A0A0B4J1Y8 123 aa8.07□□□□□ -1.12
VTI1A-209ENST00000496445 LITAFQ99732 161 aa8.07□□□□□ -1.12
VTI1A-209ENST00000496445 SPINK1P00995 79 aa8.06□□□□□ -1.12
VTI1A-209ENST00000496445 ZNF73O43830 326 aaPredicted RBP8.05□□□□□ -1.12
VTI1A-209ENST00000496445 KRTAP13-3Q3SY46 172 aa8.05□□□□□ -1.12
VTI1A-209ENST00000496445 LINC01545Q5VT33 79 aa8.05□□□□□ -1.12
VTI1A-209ENST00000496445 ST20-AS1Q8NBB2 130 aa8.03□□□□□ -1.12
VTI1A-209ENST00000496445 LINC00308Q8TCZ7 52 aa8.03□□□□□ -1.12
VTI1A-209ENST00000496445 TMEM238LA0A1B0GVL6 79 aa8.02□□□□□ -1.13
VTI1A-209ENST00000496445 RPS29P62273 56 aaKnown RBP8.02□□□□□ -1.13
VTI1A-209ENST00000496445 JOSD1Q15040 202 aaPredicted RBP8.02□□□□□ -1.13
VTI1A-209ENST00000496445 PET117Q6UWS5 81 aa8.02□□□□□ -1.13
VTI1A-209ENST00000496445 SSBP3-AS1Q7Z2R9 100 aa8.02□□□□□ -1.13
VTI1A-209ENST00000496445 Q8N377 158 aa8.02□□□□□ -1.13
VTI1A-209ENST00000496445 KRTAP4-8Q9BYQ9 185 aa8.02□□□□□ -1.13
VTI1A-209ENST00000496445 SPANXCQ9NY87 97 aa8.02□□□□□ -1.13
VTI1A-209ENST00000496445 TIMM17BO60830 172 aa8.01□□□□□ -1.13
VTI1A-209ENST00000496445 TTTY13Q9BZ97 58 aa8.01□□□□□ -1.13
VTI1A-209ENST00000496445 ZNF815PA8K554 130 aa7.99□□□□□ -1.13
VTI1A-209ENST00000496445 C3orf79P0CE67 100 aa7.99□□□□□ -1.13
VTI1A-209ENST00000496445 C9orf153Q5TBE3 101 aa7.99□□□□□ -1.13
VTI1A-209ENST00000496445 OR13C6PQ8NH95 151 aa7.97□□□□□ -1.13
VTI1A-209ENST00000496445 C5orf52A6NGY3 159 aa7.96□□□□□ -1.14
VTI1A-209ENST00000496445 COA6Q5JTJ3 125 aaKnown RBP7.96□□□□□ -1.14
VTI1A-209ENST00000496445 SPANXDQ9BXN6 97 aa7.96□□□□□ -1.14
VTI1A-209ENST00000496445 CBY1Q9Y3M2 126 aa7.96□□□□□ -1.14
VTI1A-209ENST00000496445 SLC25A20O43772 301 aa7.95□□□□□ -1.14
VTI1A-209ENST00000496445 SPRR1BP22528 89 aa7.95□□□□□ -1.14
VTI1A-209ENST00000496445 HINT1P49773 126 aaPredicted RBP7.95□□□□□ -1.14
VTI1A-209ENST00000496445 ASB16-AS1Q495Z4 193 aa7.95□□□□□ -1.14
VTI1A-209ENST00000496445 ELOF1P60002 83 aaKnown RBP7.94□□□□□ -1.14
VTI1A-209ENST00000496445 KRTDAPP60985 99 aa7.94□□□□□ -1.14
VTI1A-209ENST00000496445 KRTAP4-1Q9BYQ7 146 aa7.94□□□□□ -1.14
VTI1A-209ENST00000496445 ANKRD39Q53RE8 183 aa7.93□□□□□ -1.14
VTI1A-209ENST00000496445 DHRS4-AS1Q9P1J3 65 aa7.93□□□□□ -1.14
VTI1A-209ENST00000496445 C6orf99Q4VX62 202 aa7.92□□□□□ -1.14
VTI1A-209ENST00000496445 COX7BP24311 80 aa7.91□□□□□ -1.14
VTI1A-209ENST00000496445 LINC00518Q8N0U6 118 aa7.91□□□□□ -1.14
VTI1A-209ENST00000496445 KRTAP9-2Q9BYQ4 174 aa7.91□□□□□ -1.14
VTI1A-209ENST00000496445 SCGB1D4Q6XE38 83 aa7.9□□□□□ -1.14
VTI1A-209ENST00000496445 ATOH7Q8N100 152 aa7.9□□□□□ -1.14
VTI1A-209ENST00000496445 C20orf202A1L168 122 aa7.88□□□□□ -1.15
VTI1A-209ENST00000496445 SEC61BP60468 96 aaKnown RBP7.88□□□□□ -1.15
VTI1A-209ENST00000496445 SLC25A34Q6PIV7 304 aa7.88□□□□□ -1.15
VTI1A-209ENST00000496445 HRCT1Q6UXD1 115 aa7.88□□□□□ -1.15
VTI1A-209ENST00000496445 PCP2Q8IVA1 136 aa7.88□□□□□ -1.15
VTI1A-209ENST00000496445 LAMTOR3Q9UHA4 124 aa7.87□□□□□ -1.15
VTI1A-209ENST00000496445 TRBV7-6A0A0J9YX20 115 aa7.86□□□□□ -1.15
VTI1A-209ENST00000496445 IFITM1P13164 125 aa7.86□□□□□ -1.15
VTI1A-209ENST00000496445 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.85□□□□□ -1.15
VTI1A-209ENST00000496445 LINC01547P58512 204 aaPredicted RBP7.85□□□□□ -1.15
VTI1A-209ENST00000496445 Q1RN00 199 aa7.85□□□□□ -1.15
VTI1A-209ENST00000496445 MUSTN1Q8IVN3 82 aa7.85□□□□□ -1.15
VTI1A-209ENST00000496445 LIMD2Q9BT23 127 aa7.85□□□□□ -1.15
VTI1A-209ENST00000496445 Q6ZVH6 145 aa7.84□□□□□ -1.15
VTI1A-209ENST00000496445 SMIM29Q86T20 159 aa7.84□□□□□ -1.15
VTI1A-209ENST00000496445 DEFB105AQ8NG35 78 aa7.84□□□□□ -1.15
VTI1A-209ENST00000496445 COPS9Q8WXC6 57 aa7.84□□□□□ -1.15
VTI1A-209ENST00000496445 TEX49A0A1B0GTD5 131 aa7.83□□□□□ -1.16
VTI1A-209ENST00000496445 A0A1B0GWB2 263 aa7.83□□□□□ -1.16
VTI1A-209ENST00000496445 TAL2Q16559 108 aa7.83□□□□□ -1.16
VTI1A-209ENST00000496445 IGLV5-48A0A075B6I7 105 aa7.82□□□□□ -1.16
VTI1A-209ENST00000496445 KRTAP9-6A0A140TA67 174 aa7.82□□□□□ -1.16
VTI1A-209ENST00000496445 A6NDN8 102 aa7.82□□□□□ -1.16
VTI1A-209ENST00000496445 CD164Q04900 197 aa7.8□□□□□ -1.16
VTI1A-209ENST00000496445 AKR1D1P51857 326 aa7.79□□□□□ -1.16
VTI1A-209ENST00000496445 SMIM11BQ8TCY0 68 aa7.79□□□□□ -1.16
VTI1A-209ENST00000496445 PRO1933Q9H354 126 aa7.79□□□□□ -1.16
VTI1A-209ENST00000496445 TRAV13-2A0A0B4J235 113 aa7.78□□□□□ -1.16
VTI1A-209ENST00000496445 A0A0G2JQZ4 141 aa7.78□□□□□ -1.16
VTI1A-209ENST00000496445 C9orf92A6NGG3 77 aa7.78□□□□□ -1.16
VTI1A-209ENST00000496445 H7C2G1 150 aa7.78□□□□□ -1.16
VTI1A-209ENST00000496445 HIST3H2BBQ8N257 126 aa7.78□□□□□ -1.16
VTI1A-209ENST00000496445 HIST1H2BLQ99880 126 aa7.77□□□□□ -1.17
VTI1A-209ENST00000496445 A4D1N5 150 aa7.76□□□□□ -1.17
VTI1A-209ENST00000496445 SNRPEP62304 92 aaKnown RBP7.76□□□□□ -1.17
VTI1A-209ENST00000496445 Q5XG85 94 aa7.76□□□□□ -1.17
VTI1A-209ENST00000496445 KRTAP4-12Q9BQ66 201 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms