RNA–Protein interactions for RNA: ENST00000494707.5

RPGR-209, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 5

Gene RPGR, Length 426 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-209ENST00000494707 NIPBLQ6KC79 2804 aaeCLIP-1.19□□□□□ -2.6
RPGR-209ENST00000494707 TOPAZ1Q8N9V7 1692 aa-1.19□□□□□ -2.6
RPGR-209ENST00000494707 DNAH11Q96DT5 4516 aa-1.19□□□□□ -2.6
RPGR-209ENST00000494707 LEPROTL1O95214 131 aa-1.19□□□□□ -2.6
RPGR-209ENST00000494707 ETDBQ3ZM63 59 aa-1.19□□□□□ -2.6
RPGR-209ENST00000494707 COX6B2Q6YFQ2 88 aa-1.19□□□□□ -2.6
RPGR-209ENST00000494707 ZNF720Q7Z2F6 126 aa-1.19□□□□□ -2.6
RPGR-209ENST00000494707 SHPRHQ149N8 1683 aa-1.2□□□□□ -2.6
RPGR-209ENST00000494707 CHD1O14646 1710 aa-1.2□□□□□ -2.6
RPGR-209ENST00000494707 APOBP04114 4563 aaKnown RBP-1.2□□□□□ -2.6
RPGR-209ENST00000494707 C9orf92A6NGG3 77 aa-1.2□□□□□ -2.6
RPGR-209ENST00000494707 KALRNO60229 2985 aa-1.2□□□□□ -2.6
RPGR-209ENST00000494707 MT-ATP8P03928 68 aa-1.2□□□□□ -2.6
RPGR-209ENST00000494707 DEFA5Q01523 94 aa-1.2□□□□□ -2.6
RPGR-209ENST00000494707 DNAH1Q9P2D7 4330 aa-1.2□□□□□ -2.6
RPGR-209ENST00000494707 DNHD1Q96M86 4753 aa-1.21□□□□□ -2.6
RPGR-209ENST00000494707 SARNPP82979 210 aaKnown RBP-1.21□□□□□ -2.6
RPGR-209ENST00000494707 NRXN1Q9ULB1 1477 aa-1.21□□□□□ -2.6
RPGR-209ENST00000494707 FAM135AQ9P2D6 1515 aa-1.21□□□□□ -2.6
RPGR-209ENST00000494707 ANKRD36BQ8N2N9 1353 aa-1.21□□□□□ -2.6
RPGR-209ENST00000494707 ANKRD50Q9ULJ7 1429 aa-1.22□□□□□ -2.6
RPGR-209ENST00000494707 F8WEM9 126 aa-1.22□□□□□ -2.6
RPGR-209ENST00000494707 COX7BP24311 80 aa-1.22□□□□□ -2.6
RPGR-209ENST00000494707 COL5A1-AS1Q5SY13 56 aa-1.22□□□□□ -2.6
RPGR-209ENST00000494707 TEX15Q9BXT5 2789 aa-1.22□□□□□ -2.61
RPGR-209ENST00000494707 LAMA3Q16787 3333 aa-1.23□□□□□ -2.61
RPGR-209ENST00000494707 USP9XQ93008 2570 aaPredicted RBP-1.23□□□□□ -2.61
RPGR-209ENST00000494707 UQCRHLA0A096LP55 91 aa-1.23□□□□□ -2.61
RPGR-209ENST00000494707 NDUFA3O95167 84 aa-1.23□□□□□ -2.61
RPGR-209ENST00000494707 RPL38P63173 70 aaKnown RBP-1.23□□□□□ -2.61
RPGR-209ENST00000494707 ANKRD36A6QL64 1941 aa-1.23□□□□□ -2.61
RPGR-209ENST00000494707 MTORP42345 2549 aa-1.23□□□□□ -2.61
RPGR-209ENST00000494707 DNAH7Q8WXX0 4024 aa-1.23□□□□□ -2.61
RPGR-209ENST00000494707 WDR87Q6ZQQ6 2873 aa-1.23□□□□□ -2.61
RPGR-209ENST00000494707 MAGI2Q86UL8 1455 aa-1.24□□□□□ -2.61
RPGR-209ENST00000494707 CMYA5Q8N3K9 4069 aa-1.24□□□□□ -2.61
RPGR-209ENST00000494707 LINC00032P0C843 101 aa-1.24□□□□□ -2.61
RPGR-209ENST00000494707 S100A10P60903 97 aa-1.24□□□□□ -2.61
RPGR-209ENST00000494707 UTP20O75691 2785 aaKnown RBP-1.24□□□□□ -2.61
RPGR-209ENST00000494707 COL14A1Q05707 1796 aaKnown RBP-1.24□□□□□ -2.61
RPGR-209ENST00000494707 ZFYVE16Q7Z3T8 1539 aa-1.25□□□□□ -2.61
RPGR-209ENST00000494707 C5P01031 1676 aa-1.25□□□□□ -2.61
RPGR-209ENST00000494707 MON2Q7Z3U7 1717 aa-1.25□□□□□ -2.61
RPGR-209ENST00000494707 BCORQ6W2J9 1755 aa-1.25□□□□□ -2.61
RPGR-209ENST00000494707 FAUP35544 74 aaKnown RBP-1.25□□□□□ -2.61
RPGR-209ENST00000494707 UBE2D4Q9Y2X8 147 aa-1.25□□□□□ -2.61
RPGR-209ENST00000494707 PDE4DIPQ5VU43 2346 aa-1.25□□□□□ -2.61
RPGR-209ENST00000494707 NBEAQ8NFP9 2946 aa-1.25□□□□□ -2.61
RPGR-209ENST00000494707 PKD1L2Q7Z442 2459 aa-1.25□□□□□ -2.61
RPGR-209ENST00000494707 ABCA3Q99758 1704 aa-1.26□□□□□ -2.61
RPGR-209ENST00000494707 MT1HP80294 61 aa-1.26□□□□□ -2.61
RPGR-209ENST00000494707 GCN1Q92616 2671 aaKnown RBP-1.28□□□□□ -2.61
RPGR-209ENST00000494707 S100PP25815 95 aa-1.28□□□□□ -2.61
RPGR-209ENST00000494707 DPY30Q9C005 99 aa-1.28□□□□□ -2.61
RPGR-209ENST00000494707 LRRK2Q5S007 2527 aa-1.28□□□□□ -2.61
RPGR-209ENST00000494707 K7EP34 96 aa-1.29□□□□□ -2.62
RPGR-209ENST00000494707 RIF1Q5UIP0 2472 aaKnown RBP-1.29□□□□□ -2.62
RPGR-209ENST00000494707 SACSQ9NZJ4 4579 aa-1.3□□□□□ -2.62
RPGR-209ENST00000494707 LRRC9Q6ZRR7 1453 aa-1.3□□□□□ -2.62
RPGR-209ENST00000494707 TRIOO75962 3097 aa-1.3□□□□□ -2.62
RPGR-209ENST00000494707 KIF20BQ96Q89 1820 aa-1.3□□□□□ -2.62
RPGR-209ENST00000494707 C14orf144Q96I85 54 aa-1.3□□□□□ -2.62
RPGR-209ENST00000494707 GAFA1Q96PS6 74 aa-1.3□□□□□ -2.62
RPGR-209ENST00000494707 CCDC168Q8NDH2 2452 aa-1.3□□□□□ -2.62
RPGR-209ENST00000494707 TEX14Q8IWB6 1497 aa-1.31□□□□□ -2.62
RPGR-209ENST00000494707 FYCO1Q9BQS8 1478 aa-1.31□□□□□ -2.62
RPGR-209ENST00000494707 A0A0C4DFX4 3053 aa-1.31□□□□□ -2.62
RPGR-209ENST00000494707 FAM186AA6NE01 2351 aa-1.31□□□□□ -2.62
RPGR-209ENST00000494707 A0A1B0GUT8 65 aa-1.31□□□□□ -2.62
RPGR-209ENST00000494707 C3orf79P0CE67 100 aa-1.31□□□□□ -2.62
RPGR-209ENST00000494707 TCEAL7Q9BRU2 100 aa-1.31□□□□□ -2.62
RPGR-209ENST00000494707 DSPP15924 2871 aaKnown RBP-1.31□□□□□ -2.62
RPGR-209ENST00000494707 PREX1Q8TCU6 1659 aa-1.32□□□□□ -2.62
RPGR-209ENST00000494707 UBR3Q6ZT12 1888 aa-1.32□□□□□ -2.62
RPGR-209ENST00000494707 IQCF6A8MYZ5 107 aa-1.32□□□□□ -2.62
RPGR-209ENST00000494707 PLGLAQ15195 96 aa-1.32□□□□□ -2.62
RPGR-209ENST00000494707 RELNP78509 3460 aa-1.32□□□□□ -2.62
RPGR-209ENST00000494707 NBEAL2Q6ZNJ1 2754 aa-1.33□□□□□ -2.62
RPGR-209ENST00000494707 EPRSP07814 1512 aaKnown RBP-1.33□□□□□ -2.62
RPGR-209ENST00000494707 SMIM11AP58511 58 aa-1.33□□□□□ -2.62
RPGR-209ENST00000494707 DEFB1P60022 68 aa-1.33□□□□□ -2.62
RPGR-209ENST00000494707 S4R3F8 94 aa-1.33□□□□□ -2.62
RPGR-209ENST00000494707 DNAH8Q96JB1 4490 aa-1.33□□□□□ -2.62
RPGR-209ENST00000494707 RGPD8O14715 1765 aaPredicted RBP-1.34□□□□□ -2.62
RPGR-209ENST00000494707 RGPD5Q99666 1765 aa-1.34□□□□□ -2.62
RPGR-209ENST00000494707 CRYBG1Q9Y4K1 1723 aa-1.34□□□□□ -2.62
RPGR-209ENST00000494707 CELSR3Q9NYQ7 3312 aa-1.34□□□□□ -2.62
RPGR-209ENST00000494707 CEP290O15078 2479 aa-1.34□□□□□ -2.62
RPGR-209ENST00000494707 H0YAA0 97 aa-1.34□□□□□ -2.62
RPGR-209ENST00000494707 CYB5AP00167 134 aa-1.34□□□□□ -2.62
RPGR-209ENST00000494707 HMGN2P05204 90 aaKnown RBP-1.34□□□□□ -2.62
RPGR-209ENST00000494707 DEFB110Q30KQ9 67 aa-1.34□□□□□ -2.62
RPGR-209ENST00000494707 ACBD7Q8N6N7 88 aa-1.34□□□□□ -2.62
RPGR-209ENST00000494707 PRO3102Q9H379 93 aa-1.34□□□□□ -2.62
RPGR-209ENST00000494707 DYNC1H1Q14204 4646 aaKnown RBP-1.35□□□□□ -2.63
RPGR-209ENST00000494707 MAP3K1Q13233 1512 aa-1.35□□□□□ -2.63
RPGR-209ENST00000494707 LRRC7Q96NW7 1537 aa-1.35□□□□□ -2.63
RPGR-209ENST00000494707 RGPD2P0DJD1 1756 aa-1.36□□□□□ -2.63
RPGR-209ENST00000494707 ATP6V1G2-DDX39BF2Z307 99 aa-1.36□□□□□ -2.63
RPGR-209ENST00000494707 RBP2P50120 134 aa-1.36□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms