RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 A8MUN3 132 aa1.84□□□□□ -2.11
MDC1-208ENST00000494654 C16orf90A8MZG2 172 aa1.84□□□□□ -2.11
MDC1-208ENST00000494654 C8orf87E5RJ46 101 aa1.84□□□□□ -2.11
MDC1-208ENST00000494654 CCL24O00175 119 aa1.84□□□□□ -2.11
MDC1-208ENST00000494654 PSPHP1O15172 72 aa1.84□□□□□ -2.11
MDC1-208ENST00000494654 IGKV3-20P01619 116 aa1.84□□□□□ -2.11
MDC1-208ENST00000494654 IGLV6-57P01721 117 aa1.84□□□□□ -2.11
MDC1-208ENST00000494654 IGHV3-11P01762 117 aa1.84□□□□□ -2.11
MDC1-208ENST00000494654 IGHV4-59P01825 116 aa1.84□□□□□ -2.11
MDC1-208ENST00000494654 Q6YL49 198 aa1.84□□□□□ -2.11
MDC1-208ENST00000494654 SPANXA2-OT1Q8N9U9 137 aa1.84□□□□□ -2.11
MDC1-208ENST00000494654 LINC01006Q8NI28 216 aa1.84□□□□□ -2.11
MDC1-208ENST00000494654 DIRC1Q969H9 104 aa1.84□□□□□ -2.11
MDC1-208ENST00000494654 CDC42SE1Q9NRR8 79 aa1.84□□□□□ -2.11
MDC1-208ENST00000494654 CELA1Q9UNI1 258 aa1.84□□□□□ -2.11
MDC1-208ENST00000494654 CUBNO60494 3623 aa1.84□□□□□ -2.11
MDC1-208ENST00000494654 FBN1P35555 2871 aaKnown RBP1.84□□□□□ -2.12
MDC1-208ENST00000494654 TRGV2A0A075B6R0 118 aa1.83□□□□□ -2.12
MDC1-208ENST00000494654 LOC101927531A0A1B0GV80 90 aa1.83□□□□□ -2.12
MDC1-208ENST00000494654 ETDCA0A1B0GVM5 59 aa1.83□□□□□ -2.12
MDC1-208ENST00000494654 A6NDX4 124 aa1.83□□□□□ -2.12
MDC1-208ENST00000494654 INAFM1C9JVW0 142 aa1.83□□□□□ -2.12
MDC1-208ENST00000494654 H3BPC8 53 aa1.83□□□□□ -2.12
MDC1-208ENST00000494654 KRTAP15-1Q3LI76 137 aa1.83□□□□□ -2.12
MDC1-208ENST00000494654 FBXL19-AS1Q494R0 122 aa1.83□□□□□ -2.12
MDC1-208ENST00000494654 LINC00612Q8N6U2 182 aa1.83□□□□□ -2.12
MDC1-208ENST00000494654 C11orf45Q8TAV5 145 aa1.83□□□□□ -2.12
MDC1-208ENST00000494654 KCNQ1DNQ9H478 68 aa1.83□□□□□ -2.12
MDC1-208ENST00000494654 MAP6D1Q9H9H5 199 aa1.83□□□□□ -2.12
MDC1-208ENST00000494654 JMJD1CQ15652 2540 aa1.83□□□□□ -2.12
MDC1-208ENST00000494654 AKAP6Q13023 2319 aa1.82□□□□□ -2.12
MDC1-208ENST00000494654 TRGV4A0A0C4DH28 118 aa1.82□□□□□ -2.12
MDC1-208ENST00000494654 IGHV4-61A0A0C4DH41 118 aa1.82□□□□□ -2.12
MDC1-208ENST00000494654 LINC00959A0A1B0GUT2 108 aa1.82□□□□□ -2.12
MDC1-208ENST00000494654 A8MU10 97 aa1.82□□□□□ -2.12
MDC1-208ENST00000494654 HCG22E2RYF7 251 aa1.82□□□□□ -2.12
MDC1-208ENST00000494654 ASB16-AS1Q495Z4 193 aa1.82□□□□□ -2.12
MDC1-208ENST00000494654 Q8N9L7 120 aa1.82□□□□□ -2.12
MDC1-208ENST00000494654 Q8N9P0 234 aaPredicted RBP1.82□□□□□ -2.12
MDC1-208ENST00000494654 MAPK1IP1LQ8NDC0 245 aa1.82□□□□□ -2.12
MDC1-208ENST00000494654 LINC00208Q96KT6 92 aa1.82□□□□□ -2.12
MDC1-208ENST00000494654 B9D2Q9BPU9 175 aa1.82□□□□□ -2.12
MDC1-208ENST00000494654 PRR15LQ9BU68 103 aa1.82□□□□□ -2.12
MDC1-208ENST00000494654 FAM30AQ9NZY2 134 aa1.82□□□□□ -2.12
MDC1-208ENST00000494654 FN1P02751 2386 aaKnown RBP1.82□□□□□ -2.12
MDC1-208ENST00000494654 FLNAP21333 2647 aaKnown RBP1.82□□□□□ -2.12
MDC1-208ENST00000494654 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.82□□□□□ -2.126e-6■■□□□ 12.8
MDC1-208ENST00000494654 CSPG4Q6UVK1 2322 aa1.82□□□□□ -2.12
MDC1-208ENST00000494654 COL6A5A8TX70 2615 aa1.81□□□□□ -2.12
MDC1-208ENST00000494654 ATRQ13535 2644 aa1.81□□□□□ -2.12
MDC1-208ENST00000494654 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.81□□□□□ -2.12
MDC1-208ENST00000494654 GVQW2A0A096LPI5 108 aaPredicted RBP1.81□□□□□ -2.12
MDC1-208ENST00000494654 TRGV1A0A0A0MS02 117 aa1.81□□□□□ -2.12
MDC1-208ENST00000494654 A0A1B0GUV1 79 aa1.81□□□□□ -2.12
MDC1-208ENST00000494654 A6NED7 52 aa1.81□□□□□ -2.12
MDC1-208ENST00000494654 CHKB-CPT1BH3BT56 60 aa1.81□□□□□ -2.12
MDC1-208ENST00000494654 DEFB131AP59861 70 aa1.81□□□□□ -2.12
MDC1-208ENST00000494654 KIAA0087Q14695 138 aa1.81□□□□□ -2.12
MDC1-208ENST00000494654 HIGD2BQ4VC39 106 aa1.81□□□□□ -2.12
MDC1-208ENST00000494654 C10orf25Q5T742 122 aa1.81□□□□□ -2.12
MDC1-208ENST00000494654 NKAPP1Q8N9T2 125 aa1.81□□□□□ -2.12
MDC1-208ENST00000494654 Q8NDZ9 215 aa1.81□□□□□ -2.12
MDC1-208ENST00000494654 C16orf74Q96GX8 76 aa1.81□□□□□ -2.12
MDC1-208ENST00000494654 PLAC8Q9NZF1 115 aa1.81□□□□□ -2.12
MDC1-208ENST00000494654 IGLV5-48A0A075B6I7 105 aa1.8□□□□□ -2.12
MDC1-208ENST00000494654 A0A087X002 238 aa1.8□□□□□ -2.12
MDC1-208ENST00000494654 IGKV3OR2-268A0A0C4DH90 116 aa1.8□□□□□ -2.12
MDC1-208ENST00000494654 A0A0J9YWU9 116 aa1.8□□□□□ -2.12
MDC1-208ENST00000494654 LRCOL1A6NCL2 159 aa1.8□□□□□ -2.12
MDC1-208ENST00000494654 H3BUX3 64 aa1.8□□□□□ -2.12
MDC1-208ENST00000494654 HTN1P15515 57 aa1.8□□□□□ -2.12
MDC1-208ENST00000494654 MP68P56378 58 aa1.8□□□□□ -2.12
MDC1-208ENST00000494654 DSCR9P59020 149 aa1.8□□□□□ -2.12
MDC1-208ENST00000494654 MOBPQ13875 183 aa1.8□□□□□ -2.12
MDC1-208ENST00000494654 SPTSSBQ8NFR3 76 aa1.8□□□□□ -2.12
MDC1-208ENST00000494654 LINC01558Q9Y6Z2 57 aa1.8□□□□□ -2.12
MDC1-208ENST00000494654 DNAH1Q9P2D7 4330 aa1.8□□□□□ -2.12
MDC1-208ENST00000494654 ANK3Q12955 4377 aaKnown RBP1.8□□□□□ -2.12
MDC1-208ENST00000494654 STAB1Q9NY15 2570 aa1.8□□□□□ -2.12
MDC1-208ENST00000494654 SORL1Q92673 2214 aa1.79□□□□□ -2.12
MDC1-208ENST00000494654 C3orf84H3BNL1 204 aa1.79□□□□□ -2.12
MDC1-208ENST00000494654 PRR3P79522 188 aaKnown RBP1.79□□□□□ -2.12
MDC1-208ENST00000494654 SPAG11BQ08648 103 aa1.79□□□□□ -2.12
MDC1-208ENST00000494654 LY6EQ16553 131 aa1.79□□□□□ -2.12
MDC1-208ENST00000494654 ODF3L2Q3SX64 289 aa1.79□□□□□ -2.12
MDC1-208ENST00000494654 KHDC1LQ5JSQ8 128 aa1.79□□□□□ -2.12
MDC1-208ENST00000494654 CASC2Q6XLA1 102 aa1.79□□□□□ -2.12
MDC1-208ENST00000494654 C9orf163Q8N9P6 203 aa1.79□□□□□ -2.12
MDC1-208ENST00000494654 ST20-AS1Q8NBB2 130 aa1.79□□□□□ -2.12
MDC1-208ENST00000494654 Q8NBF4 154 aa1.79□□□□□ -2.12
MDC1-208ENST00000494654 LINC00476Q8WZB0 136 aa1.79□□□□□ -2.12
MDC1-208ENST00000494654 SPRR4Q96PI1 79 aa1.79□□□□□ -2.12
MDC1-208ENST00000494654 WFDC10AQ9H1F0 79 aa1.79□□□□□ -2.12
MDC1-208ENST00000494654 KLK12Q9UKR0 248 aa1.79□□□□□ -2.12
MDC1-208ENST00000494654 HRNRQ86YZ3 2850 aaPredicted RBP1.79□□□□□ -2.12
MDC1-208ENST00000494654 NSD1Q96L73 2696 aaPredicted RBP1.78□□□□□ -2.12
MDC1-208ENST00000494654 K7EQZ3 153 aa1.78□□□□□ -2.12
MDC1-208ENST00000494654 PRM2P04554 102 aa1.78□□□□□ -2.12
MDC1-208ENST00000494654 DSCR10P59022 87 aa1.78□□□□□ -2.12
MDC1-208ENST00000494654 LINC01554Q52M75 96 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms