RNA–Protein interactions for RNA: ENST00000494446.1

FN1-225, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 676 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-225ENST00000494446 LINC00242Q5T6M2 205 aa3.94□□□□□ -1.78
FN1-225ENST00000494446 GTF2H5Q6ZYL4 71 aa3.94□□□□□ -1.78
FN1-225ENST00000494446 LINC00337Q8N6G1 96 aa3.94□□□□□ -1.78
FN1-225ENST00000494446 RAB37Q96AX2 223 aa3.94□□□□□ -1.78
FN1-225ENST00000494446 LITAFQ99732 161 aa3.94□□□□□ -1.78
FN1-225ENST00000494446 SPANXDQ9BXN6 97 aa3.94□□□□□ -1.78
FN1-225ENST00000494446 PPDPFQ9H3Y8 114 aa3.94□□□□□ -1.78
FN1-225ENST00000494446 GEMIN7Q9H840 131 aaKnown RBP3.94□□□□□ -1.78
FN1-225ENST00000494446 SPANXCQ9NY87 97 aa3.94□□□□□ -1.78
FN1-225ENST00000494446 FAM168BA1KXE4 195 aa3.93□□□□□ -1.78
FN1-225ENST00000494446 GAGE10A6NGK3 116 aa3.93□□□□□ -1.78
FN1-225ENST00000494446 SMIM1B2RUZ4 78 aa3.93□□□□□ -1.78
FN1-225ENST00000494446 NDUFA1O15239 70 aa3.93□□□□□ -1.78
FN1-225ENST00000494446 APOMO95445 188 aa3.93□□□□□ -1.78
FN1-225ENST00000494446 FABP2P12104 132 aa3.93□□□□□ -1.78
FN1-225ENST00000494446 UBE2BP63146 152 aa3.93□□□□□ -1.78
FN1-225ENST00000494446 MT1HP80294 61 aa3.93□□□□□ -1.78
FN1-225ENST00000494446 FAM19A5Q7Z5A7 132 aaPredicted RBP3.93□□□□□ -1.78
FN1-225ENST00000494446 CDKN2A-AS1Q9UH64 79 aa3.93□□□□□ -1.78
FN1-225ENST00000494446 NDUFA12Q9UI09 145 aa3.93□□□□□ -1.78
FN1-225ENST00000494446 SPCS1Q9Y6A9 102 aa3.93□□□□□ -1.78
FN1-225ENST00000494446 A0A0B4J2C4 111 aa3.92□□□□□ -1.78
FN1-225ENST00000494446 SPINK8P0C7L1 97 aa3.92□□□□□ -1.78
FN1-225ENST00000494446 KRTAP10-6P60371 365 aaPredicted RBP3.92□□□□□ -1.78
FN1-225ENST00000494446 TMEM101Q96IK0 257 aa3.92□□□□□ -1.78
FN1-225ENST00000494446 CAMK2N2Q96S95 79 aa3.92□□□□□ -1.78
FN1-225ENST00000494446 NAA38Q9BRA0 125 aaKnown RBP3.92□□□□□ -1.78
FN1-225ENST00000494446 CFC1P0CG37 223 aa3.91□□□□□ -1.78
FN1-225ENST00000494446 SEC61BP60468 96 aaKnown RBP3.91□□□□□ -1.78
FN1-225ENST00000494446 RPL24P83731 157 aaKnown RBP3.91□□□□□ -1.78
FN1-225ENST00000494446 LINC00304Q8N9R0 145 aa3.91□□□□□ -1.78
FN1-225ENST00000494446 TRAV13-1A0A0B4J241 112 aa3.9□□□□□ -1.79
FN1-225ENST00000494446 LINC00959A0A1B0GUT2 108 aa3.9□□□□□ -1.79
FN1-225ENST00000494446 A4D1N5 150 aa3.9□□□□□ -1.79
FN1-225ENST00000494446 ZNF861PO60384 105 aa3.9□□□□□ -1.79
FN1-225ENST00000494446 IFITM1P13164 125 aa3.9□□□□□ -1.79
FN1-225ENST00000494446 LYRM7Q5U5X0 104 aa3.9□□□□□ -1.79
FN1-225ENST00000494446 MUSTN1Q8IVN3 82 aa3.9□□□□□ -1.79
FN1-225ENST00000494446 ZNF625Q96I27 306 aaPredicted RBP3.9□□□□□ -1.79
FN1-225ENST00000494446 ANAPC11Q9NYG5 84 aa3.9□□□□□ -1.79
FN1-225ENST00000494446 IGHV3OR16-9A0A0B4J2B5 98 aa3.89□□□□□ -1.79
FN1-225ENST00000494446 M0QXV9 152 aa3.89□□□□□ -1.79
FN1-225ENST00000494446 MALP21145 153 aa3.89□□□□□ -1.79
FN1-225ENST00000494446 HERV-K104P63124 156 aa3.89□□□□□ -1.79
FN1-225ENST00000494446 SS18Q15532 418 aa3.89□□□□□ -1.79
FN1-225ENST00000494446 ADAMTSL4-AS1Q5T5F5 129 aa3.89□□□□□ -1.79
FN1-225ENST00000494446 LINC01561Q8N1V8 128 aa3.89□□□□□ -1.79
FN1-225ENST00000494446 PRO1854Q9UHT4 67 aa3.89□□□□□ -1.79
FN1-225ENST00000494446 M0R2T5 61 aa3.88□□□□□ -1.79
FN1-225ENST00000494446 RNF151Q2KHN1 245 aa3.88□□□□□ -1.79
FN1-225ENST00000494446 KRTAP13-2Q52LG2 175 aa3.88□□□□□ -1.79
FN1-225ENST00000494446 SFTA2Q6UW10 78 aa3.88□□□□□ -1.79
FN1-225ENST00000494446 CD164L2Q6UWJ8 174 aa3.88□□□□□ -1.79
FN1-225ENST00000494446 PRO0461Q9UI25 63 aa3.88□□□□□ -1.79
FN1-225ENST00000494446 TRBV20-1A0A075B6N2 111 aa3.87□□□□□ -1.79
FN1-225ENST00000494446 F8W1H4 67 aa3.87□□□□□ -1.79
FN1-225ENST00000494446 KRTAP19-2Q3LHN2 52 aa3.87□□□□□ -1.79
FN1-225ENST00000494446 KRTAP13-3Q3SY46 172 aa3.87□□□□□ -1.79
FN1-225ENST00000494446 GAGE2EQ4V326 116 aa3.87□□□□□ -1.79
FN1-225ENST00000494446 OCIAD2Q56VL3 154 aa3.87□□□□□ -1.79
FN1-225ENST00000494446 COX7B2Q8TF08 81 aa3.87□□□□□ -1.79
FN1-225ENST00000494446 COPS9Q8WXC6 57 aa3.87□□□□□ -1.79
FN1-225ENST00000494446 C2orf48Q96LS8 159 aa3.87□□□□□ -1.79
FN1-225ENST00000494446 GAGE2DQ9UEU5 116 aa3.87□□□□□ -1.79
FN1-225ENST00000494446 TRBV30A0A0K0K1B3 111 aa3.86□□□□□ -1.79
FN1-225ENST00000494446 H3BMG7 143 aa3.86□□□□□ -1.79
FN1-225ENST00000494446 COX7A2LO14548 114 aa3.86□□□□□ -1.79
FN1-225ENST00000494446 SOSTDC1Q6X4U4 206 aa3.86□□□□□ -1.79
FN1-225ENST00000494446 KRTAP7-1Q8IUC3 87 aa3.86□□□□□ -1.79
FN1-225ENST00000494446 LINC00308Q8TCZ7 52 aa3.86□□□□□ -1.79
FN1-225ENST00000494446 ERG28Q9UKR5 140 aa3.86□□□□□ -1.79
FN1-225ENST00000494446 K7ERU9 68 aa3.85□□□□□ -1.79
FN1-225ENST00000494446 TCL1BO95988 128 aa3.85□□□□□ -1.79
FN1-225ENST00000494446 MEIG1Q5JSS6 88 aa3.85□□□□□ -1.79
FN1-225ENST00000494446 Q8IZM0 81 aa3.85□□□□□ -1.79
FN1-225ENST00000494446 LOC107984156A0A0G2JMH3 177 aa3.84□□□□□ -1.79
FN1-225ENST00000494446 TRIAP1O43715 76 aa3.84□□□□□ -1.79
FN1-225ENST00000494446 PRSS2P07478 247 aa3.84□□□□□ -1.79
FN1-225ENST00000494446 RPL28P46779 137 aaKnown RBP3.84□□□□□ -1.79
FN1-225ENST00000494446 SPAG11BQ08648 103 aa3.84□□□□□ -1.79
FN1-225ENST00000494446 FP248Q71RG6 208 aaPredicted RBP3.84□□□□□ -1.79
FN1-225ENST00000494446 C5orf38Q86SI9 138 aa3.84□□□□□ -1.79
FN1-225ENST00000494446 ARL17AQ8IVW1 177 aa3.84□□□□□ -1.79
FN1-225ENST00000494446 DAND5Q8N907 189 aa3.84□□□□□ -1.79
FN1-225ENST00000494446 CXCL5P42830 114 aa3.83□□□□□ -1.8
FN1-225ENST00000494446 PSMB2P49721 201 aa3.83□□□□□ -1.8
FN1-225ENST00000494446 NPC2P61916 151 aa3.83□□□□□ -1.8
FN1-225ENST00000494446 TOMM7Q9P0U1 55 aa3.83□□□□□ -1.8
FN1-225ENST00000494446 TLX1NBP0CAT3 122 aa3.82□□□□□ -1.8
FN1-225ENST00000494446 KIAA0087Q14695 138 aa3.82□□□□□ -1.8
FN1-225ENST00000494446 ATXN8Q156A1 80 aa3.82□□□□□ -1.8
FN1-225ENST00000494446 Q1RN00 199 aa3.82□□□□□ -1.8
FN1-225ENST00000494446 C10orf25Q5T742 122 aa3.82□□□□□ -1.8
FN1-225ENST00000494446 UNQ6190/PRO20217Q6UXQ8 127 aa3.82□□□□□ -1.8
FN1-225ENST00000494446 MIR7-3HGQ8N6C7 128 aa3.82□□□□□ -1.8
FN1-225ENST00000494446 FCGBPQ9Y6R7 5405 aaPredicted RBP3.81□□□□□ -1.8
FN1-225ENST00000494446 A0A0U1RRA0 63 aa3.81□□□□□ -1.8
FN1-225ENST00000494446 H7C2G1 150 aa3.81□□□□□ -1.8
FN1-225ENST00000494446 LST1O00453 97 aa3.81□□□□□ -1.8
FN1-225ENST00000494446 COX6CP09669 75 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms