RNA–Protein interactions for RNA: ENST00000494268.1

MSL3-217, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-217ENST00000494268 PDE6GP18545 87 aa3.01□□□□□ -1.93
MSL3-217ENST00000494268 FAM27BQ5VT28 67 aa3.01□□□□□ -1.93
MSL3-217ENST00000494268 NTM-AS1Q6ZSK4 140 aa3.01□□□□□ -1.93
MSL3-217ENST00000494268 Q8NAQ8 132 aa3.01□□□□□ -1.93
MSL3-217ENST00000494268 MRPL36Q9P0J6 103 aaKnown RBP3.01□□□□□ -1.93
MSL3-217ENST00000494268 ORMDL1Q9P0S3 153 aa3.01□□□□□ -1.93
MSL3-217ENST00000494268 FLNCQ14315 2725 aa3.01□□□□□ -1.93
MSL3-217ENST00000494268 UTP20O75691 2785 aaKnown RBP3□□□□□ -1.93
MSL3-217ENST00000494268 LRBAP50851 2863 aa3□□□□□ -1.93
MSL3-217ENST00000494268 SPTBN1Q01082 2364 aaKnown RBP3□□□□□ -1.93
MSL3-217ENST00000494268 LOC110117498A0A087WWA1 95 aa3□□□□□ -1.93
MSL3-217ENST00000494268 TRBV10-1A0A0K0K1A3 114 aa3□□□□□ -1.93
MSL3-217ENST00000494268 P0C880 135 aa3□□□□□ -1.93
MSL3-217ENST00000494268 DEFA4P12838 97 aa3□□□□□ -1.93
MSL3-217ENST00000494268 C10orf113Q5VZT2 155 aa3□□□□□ -1.93
MSL3-217ENST00000494268 CRYBG3Q68DQ2 2970 aa3□□□□□ -1.93
MSL3-217ENST00000494268 HCP5Q6MZN7 132 aa3□□□□□ -1.93
MSL3-217ENST00000494268 LINC00322Q6ZN03 302 aaPredicted RBP3□□□□□ -1.93
MSL3-217ENST00000494268 C20orf166-AS1Q96NR2 134 aa3□□□□□ -1.93
MSL3-217ENST00000494268 HRNRQ86YZ3 2850 aaPredicted RBP3□□□□□ -1.93
MSL3-217ENST00000494268 ADGRG4Q8IZF6 3080 aa3□□□□□ -1.93
MSL3-217ENST00000494268 UBR5O95071 2799 aaPredicted RBP3□□□□□ -1.93
MSL3-217ENST00000494268 TENM4Q6N022 2769 aa3□□□□□ -1.93
MSL3-217ENST00000494268 DCHS2Q6V1P9 2916 aa2.99□□□□□ -1.93
MSL3-217ENST00000494268 IGKV1D-42A0A075B6H8 117 aa2.99□□□□□ -1.93
MSL3-217ENST00000494268 TRAV21A0A0B4J279 112 aa2.99□□□□□ -1.93
MSL3-217ENST00000494268 KRTAP13-2Q52LG2 175 aa2.99□□□□□ -1.93
MSL3-217ENST00000494268 KRTAP26-1Q6PEX3 210 aa2.99□□□□□ -1.93
MSL3-217ENST00000494268 ZNF625Q96I27 306 aaPredicted RBP2.99□□□□□ -1.93
MSL3-217ENST00000494268 LINC00208Q96KT6 92 aa2.99□□□□□ -1.93
MSL3-217ENST00000494268 ZNRD1Q9P1U0 126 aa2.99□□□□□ -1.93
MSL3-217ENST00000494268 HELZ2Q9BYK8 2649 aaKnown RBP2.99□□□□□ -1.93
MSL3-217ENST00000494268 HECTD1Q9ULT8 2610 aa2.99□□□□□ -1.93
MSL3-217ENST00000494268 C1orf137Q5JT78 98 aa2.98□□□□□ -1.93
MSL3-217ENST00000494268 CSAG1Q6PB30 78 aa2.98□□□□□ -1.93
MSL3-217ENST00000494268 COX7B2Q8TF08 81 aa2.98□□□□□ -1.93
MSL3-217ENST00000494268 FLNBO75369 2602 aaKnown RBP2.98□□□□□ -1.93
MSL3-217ENST00000494268 USP9XQ93008 2570 aaPredicted RBP2.98□□□□□ -1.93
MSL3-217ENST00000494268 CADP27708 2225 aa2.97□□□□□ -1.93
MSL3-217ENST00000494268 PLCE1Q9P212 2302 aa2.97□□□□□ -1.93
MSL3-217ENST00000494268 ICE1Q9Y2F5 2266 aa2.97□□□□□ -1.93
MSL3-217ENST00000494268 DOPEY2Q9Y3R5 2298 aa2.97□□□□□ -1.93
MSL3-217ENST00000494268 IGHV1-3A0A0C4DH29 117 aa2.97□□□□□ -1.93
MSL3-217ENST00000494268 C17orf98A8MV24 154 aa2.97□□□□□ -1.93
MSL3-217ENST00000494268 H3BQ85 93 aa2.97□□□□□ -1.93
MSL3-217ENST00000494268 IGLV3-1P01715 115 aa2.97□□□□□ -1.93
MSL3-217ENST00000494268 TFF1P04155 84 aa2.97□□□□□ -1.93
MSL3-217ENST00000494268 KLK9Q9UKQ9 250 aa2.97□□□□□ -1.93
MSL3-217ENST00000494268 MYO18BQ8IUG5 2567 aa2.97□□□□□ -1.93
MSL3-217ENST00000494268 GCN1Q92616 2671 aaKnown RBP2.96□□□□□ -1.93
MSL3-217ENST00000494268 ARFGEF3Q5TH69 2177 aa2.96□□□□□ -1.94
MSL3-217ENST00000494268 ODF3BA8MYP8 253 aa2.96□□□□□ -1.94
MSL3-217ENST00000494268 H3BPC8 53 aa2.96□□□□□ -1.94
MSL3-217ENST00000494268 WFDC9Q8NEX5 89 aa2.96□□□□□ -1.94
MSL3-217ENST00000494268 Q8TAT8 98 aa2.96□□□□□ -1.94
MSL3-217ENST00000494268 CIRBP-AS1Q8TBR5 109 aa2.96□□□□□ -1.94
MSL3-217ENST00000494268 SMIM2Q9BVW6 85 aa2.96□□□□□ -1.94
MSL3-217ENST00000494268 BAHCC1Q9P281 2608 aa2.96□□□□□ -1.94
MSL3-217ENST00000494268 ZFHX3Q15911 3703 aa2.96□□□□□ -1.94
MSL3-217ENST00000494268 LRRK2Q5S007 2527 aa2.95□□□□□ -1.94
MSL3-217ENST00000494268 PKDREJQ9NTG1 2253 aa2.95□□□□□ -1.94
MSL3-217ENST00000494268 TACC2O95359 2948 aa2.95□□□□□ -1.94
MSL3-217ENST00000494268 CELSR2Q9HCU4 2923 aa2.95□□□□□ -1.94
MSL3-217ENST00000494268 IGKV1D-37A0A075B6S9 117 aa2.95□□□□□ -1.94
MSL3-217ENST00000494268 SPAG11BQ08648 103 aa2.95□□□□□ -1.94
MSL3-217ENST00000494268 SPAG11AQ6PDA7 123 aa2.95□□□□□ -1.94
MSL3-217ENST00000494268 MIR7-3HGQ8N6C7 128 aa2.95□□□□□ -1.94
MSL3-217ENST00000494268 DMAC1Q96GE9 116 aa2.95□□□□□ -1.94
MSL3-217ENST00000494268 HIGD2AQ9BW72 106 aa2.95□□□□□ -1.94
MSL3-217ENST00000494268 USP9YO00507 2555 aaPredicted RBP2.95□□□□□ -1.94
MSL3-217ENST00000494268 CACNA1DQ01668 2161 aa2.94□□□□□ -1.94
MSL3-217ENST00000494268 ABCA4P78363 2273 aa2.94□□□□□ -1.94
MSL3-217ENST00000494268 IGKV1OR2-108A0A075B7D4 117 aa2.94□□□□□ -1.94
MSL3-217ENST00000494268 IGHV1-18A0A0C4DH31 117 aa2.94□□□□□ -1.94
MSL3-217ENST00000494268 A8MUU9 505 aa2.94□□□□□ -1.94
MSL3-217ENST00000494268 MRPL33O75394 65 aaKnown RBP2.94□□□□□ -1.94
MSL3-217ENST00000494268 RPS27P42677 84 aaKnown RBP2.94□□□□□ -1.94
MSL3-217ENST00000494268 KRTAP25-1Q3LHN0 102 aa2.94□□□□□ -1.94
MSL3-217ENST00000494268 AKAP6Q13023 2319 aa2.94□□□□□ -1.94
MSL3-217ENST00000494268 ANKHD1Q8IWZ3 2542 aaKnown RBP2.93□□□□□ -1.94
MSL3-217ENST00000494268 POLQO75417 2590 aa2.93□□□□□ -1.94
MSL3-217ENST00000494268 PTPN13Q12923 2485 aa2.93□□□□□ -1.94
MSL3-217ENST00000494268 DOPEY1Q5JWR5 2465 aa2.93□□□□□ -1.94
MSL3-217ENST00000494268 DEFB108AA8MXU0 73 aa2.93□□□□□ -1.94
MSL3-217ENST00000494268 H0Y9P7 68 aa2.93□□□□□ -1.94
MSL3-217ENST00000494268 H3BSH0 61 aa2.93□□□□□ -1.94
MSL3-217ENST00000494268 IGHV3-53P01767 116 aa2.93□□□□□ -1.94
MSL3-217ENST00000494268 SPATA8Q6RVD6 105 aa2.93□□□□□ -1.94
MSL3-217ENST00000494268 CENPEQ02224 2701 aa2.93□□□□□ -1.94
MSL3-217ENST00000494268 SPG11Q96JI7 2443 aa2.93□□□□□ -1.94
MSL3-217ENST00000494268 ROS1P08922 2347 aa2.93□□□□□ -1.94
MSL3-217ENST00000494268 FBN2P35556 2912 aa2.92□□□□□ -1.94
MSL3-217ENST00000494268 CCL18P55774 89 aa2.92□□□□□ -1.94
MSL3-217ENST00000494268 DEFB113Q30KQ7 82 aa2.92□□□□□ -1.94
MSL3-217ENST00000494268 SPRR4Q96PI1 79 aa2.92□□□□□ -1.94
MSL3-217ENST00000494268 KCNQ1DNQ9H478 68 aa2.92□□□□□ -1.94
MSL3-217ENST00000494268 ASH1LQ9NR48 2969 aaKnown RBP2.92□□□□□ -1.94
MSL3-217ENST00000494268 NBPF19A0A087WUL8 3843 aa2.92□□□□□ -1.94
MSL3-217ENST00000494268 ANKRD17O75179 2603 aaKnown RBP2.91□□□□□ -1.94
MSL3-217ENST00000494268 APCP25054 2843 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms