RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 ANAPC11Q9NYG5 84 aa6.22□□□□□ -1.41
TRAPPC12-222ENST00000493792 PCP2Q8IVA1 136 aa6.21□□□□□ -1.42
TRAPPC12-222ENST00000493792 KRTAP9-6A0A140TA67 174 aa6.2□□□□□ -1.42
TRAPPC12-222ENST00000493792 C5orf52A6NGY3 159 aa6.2□□□□□ -1.42
TRAPPC12-222ENST00000493792 CRYGAP11844 174 aa6.2□□□□□ -1.42
TRAPPC12-222ENST00000493792 SPANXCQ9NY87 97 aa6.2□□□□□ -1.42
TRAPPC12-222ENST00000493792 TRAV23DV6A0A075B6W5 121 aa6.19□□□□□ -1.42
TRAPPC12-222ENST00000493792 LINC00337Q8N6G1 96 aa6.19□□□□□ -1.42
TRAPPC12-222ENST00000493792 COPS9Q8WXC6 57 aa6.19□□□□□ -1.42
TRAPPC12-222ENST00000493792 IGLV6-57P01721 117 aa6.18□□□□□ -1.42
TRAPPC12-222ENST00000493792 SPRR1AP35321 89 aa6.18□□□□□ -1.42
TRAPPC12-222ENST00000493792 TYMSOSQ8TAI1 123 aa6.18□□□□□ -1.42
TRAPPC12-222ENST00000493792 SPANXDQ9BXN6 97 aa6.18□□□□□ -1.42
TRAPPC12-222ENST00000493792 FAT4Q6V0I7 4981 aa6.18□□□□□ -1.42
TRAPPC12-222ENST00000493792 A0A087X002 238 aa6.17□□□□□ -1.42
TRAPPC12-222ENST00000493792 HINT1P49773 126 aaPredicted RBP6.17□□□□□ -1.42
TRAPPC12-222ENST00000493792 SMCR5Q8TEV8 140 aa6.17□□□□□ -1.42
TRAPPC12-222ENST00000493792 CBY1Q9Y3M2 126 aa6.17□□□□□ -1.42
TRAPPC12-222ENST00000493792 ZNF706Q9Y5V0 76 aaPredicted RBP6.17□□□□□ -1.42
TRAPPC12-222ENST00000493792 B5MCH6 92 aa6.16□□□□□ -1.42
TRAPPC12-222ENST00000493792 ZNF73O43830 326 aaPredicted RBP6.16□□□□□ -1.42
TRAPPC12-222ENST00000493792 IFITM1P13164 125 aa6.16□□□□□ -1.42
TRAPPC12-222ENST00000493792 MUSTN1Q8IVN3 82 aa6.16□□□□□ -1.42
TRAPPC12-222ENST00000493792 LINC00518Q8N0U6 118 aa6.16□□□□□ -1.42
TRAPPC12-222ENST00000493792 PPDPFQ9H3Y8 114 aa6.16□□□□□ -1.42
TRAPPC12-222ENST00000493792 KRTAP4-16G5E9R7 235 aaPredicted RBP6.15□□□□□ -1.42
TRAPPC12-222ENST00000493792 FAM229BQ4G0N7 80 aa6.15□□□□□ -1.42
TRAPPC12-222ENST00000493792 Q6ZVH6 145 aa6.15□□□□□ -1.42
TRAPPC12-222ENST00000493792 SPRR4Q96PI1 79 aa6.15□□□□□ -1.42
TRAPPC12-222ENST00000493792 TMA7Q9Y2S6 64 aaKnown RBP6.15□□□□□ -1.42
TRAPPC12-222ENST00000493792 A6NDN8 102 aa6.14□□□□□ -1.43
TRAPPC12-222ENST00000493792 TSPAN13O95857 204 aa6.14□□□□□ -1.43
TRAPPC12-222ENST00000493792 JOSD1Q15040 202 aaPredicted RBP6.14□□□□□ -1.43
TRAPPC12-222ENST00000493792 KRTAP13-2Q52LG2 175 aa6.14□□□□□ -1.43
TRAPPC12-222ENST00000493792 Q6ZRX8 168 aa6.14□□□□□ -1.43
TRAPPC12-222ENST00000493792 GAGE2AQ6NT46 116 aa6.13□□□□□ -1.43
TRAPPC12-222ENST00000493792 ERC2-IT1O76042 136 aa6.12□□□□□ -1.43
TRAPPC12-222ENST00000493792 C3orf22Q8N5N4 141 aa6.12□□□□□ -1.43
TRAPPC12-222ENST00000493792 Q9BRP9 147 aa6.12□□□□□ -1.43
TRAPPC12-222ENST00000493792 PAM16Q9Y3D7 125 aa6.12□□□□□ -1.43
TRAPPC12-222ENST00000493792 SPATA45Q537H7 98 aa6.11□□□□□ -1.43
TRAPPC12-222ENST00000493792 VAMP8Q9BV40 100 aa6.11□□□□□ -1.43
TRAPPC12-222ENST00000493792 COX8AP10176 69 aa6.1□□□□□ -1.43
TRAPPC12-222ENST00000493792 COX7BP24311 80 aa6.1□□□□□ -1.43
TRAPPC12-222ENST00000493792 C6orf99Q4VX62 202 aa6.1□□□□□ -1.43
TRAPPC12-222ENST00000493792 LCE2AQ5TA79 106 aaPredicted RBP6.1□□□□□ -1.43
TRAPPC12-222ENST00000493792 LINC00304Q8N9R0 145 aa6.1□□□□□ -1.43
TRAPPC12-222ENST00000493792 C14orf144Q96I85 54 aa6.1□□□□□ -1.43
TRAPPC12-222ENST00000493792 HIST1H4GQ99525 98 aa6.1□□□□□ -1.43
TRAPPC12-222ENST00000493792 TRAV13-2A0A0B4J235 113 aa6.09□□□□□ -1.43
TRAPPC12-222ENST00000493792 PRR4Q16378 134 aa6.09□□□□□ -1.43
TRAPPC12-222ENST00000493792 IGLV9-49A0A0B4J1Y8 123 aa6.08□□□□□ -1.44
TRAPPC12-222ENST00000493792 A4D1N5 150 aa6.08□□□□□ -1.44
TRAPPC12-222ENST00000493792 ST20-AS1Q8NBB2 130 aa6.08□□□□□ -1.44
TRAPPC12-222ENST00000493792 DHRS4-AS1Q9P1J3 65 aa6.08□□□□□ -1.44
TRAPPC12-222ENST00000493792 C4orf48Q5BLP8 95 aa6.07□□□□□ -1.44
TRAPPC12-222ENST00000493792 ELOF1P60002 83 aaKnown RBP6.06□□□□□ -1.44
TRAPPC12-222ENST00000493792 MOBPQ13875 183 aa6.06□□□□□ -1.44
TRAPPC12-222ENST00000493792 LINC00483Q53H64 154 aa6.06□□□□□ -1.44
TRAPPC12-222ENST00000493792 SLC25A34Q6PIV7 304 aa6.06□□□□□ -1.44
TRAPPC12-222ENST00000493792 C12orf57Q99622 126 aa6.06□□□□□ -1.44
TRAPPC12-222ENST00000493792 A0A1B0GWB2 263 aa6.05□□□□□ -1.44
TRAPPC12-222ENST00000493792 DLEU1O43261 78 aa6.05□□□□□ -1.44
TRAPPC12-222ENST00000493792 C9orf153Q5TBE3 101 aa6.05□□□□□ -1.44
TRAPPC12-222ENST00000493792 Q8NBF4 154 aa6.05□□□□□ -1.44
TRAPPC12-222ENST00000493792 DEFB105AQ8NG35 78 aa6.05□□□□□ -1.44
TRAPPC12-222ENST00000493792 SMIM11BQ8TCY0 68 aa6.05□□□□□ -1.44
TRAPPC12-222ENST00000493792 TAL2Q16559 108 aa6.04□□□□□ -1.44
TRAPPC12-222ENST00000493792 TRBV7-6A0A0J9YX20 115 aa6.03□□□□□ -1.44
TRAPPC12-222ENST00000493792 VAMP3Q15836 100 aa6.03□□□□□ -1.44
TRAPPC12-222ENST00000493792 PYY3Q5JQD4 70 aa6.03□□□□□ -1.44
TRAPPC12-222ENST00000493792 RETNLBQ9BQ08 111 aa6.03□□□□□ -1.44
TRAPPC12-222ENST00000493792 H7C2G1 150 aa6.02□□□□□ -1.45
TRAPPC12-222ENST00000493792 SPAG11AQ6PDA7 123 aa6.02□□□□□ -1.45
TRAPPC12-222ENST00000493792 SLC25A20O43772 301 aa6.01□□□□□ -1.45
TRAPPC12-222ENST00000493792 SSBP3-AS1Q7Z2R9 100 aa6.01□□□□□ -1.45
TRAPPC12-222ENST00000493792 RAB37Q96AX2 223 aa6.01□□□□□ -1.45
TRAPPC12-222ENST00000493792 NHP2Q9NX24 153 aaKnown RBP6.01□□□□□ -1.45
TRAPPC12-222ENST00000493792 HIGD1BQ9P298 99 aa6.01□□□□□ -1.45
TRAPPC12-222ENST00000493792 Q1RN00 199 aa6□□□□□ -1.45
TRAPPC12-222ENST00000493792 C2orf91Q6ZV80 131 aa6□□□□□ -1.45
TRAPPC12-222ENST00000493792 LAMTOR3Q9UHA4 124 aa6□□□□□ -1.45
TRAPPC12-222ENST00000493792 FSIP2Q5CZC0 6907 aa5.99□□□□□ -1.45
TRAPPC12-222ENST00000493792 A0A0U1RQV1 116 aa5.98□□□□□ -1.45
TRAPPC12-222ENST00000493792 TEX49A0A1B0GTD5 131 aa5.98□□□□□ -1.45
TRAPPC12-222ENST00000493792 CFC1BP0CG36 223 aa5.98□□□□□ -1.45
TRAPPC12-222ENST00000493792 CFC1P0CG37 223 aa5.98□□□□□ -1.45
TRAPPC12-222ENST00000493792 SPRR1BP22528 89 aa5.98□□□□□ -1.45
TRAPPC12-222ENST00000493792 TMEM238LA0A1B0GVL6 79 aa5.97□□□□□ -1.45
TRAPPC12-222ENST00000493792 A6NJY4 79 aa5.97□□□□□ -1.45
TRAPPC12-222ENST00000493792 SPINK1P00995 79 aa5.97□□□□□ -1.45
TRAPPC12-222ENST00000493792 CTAG1AP78358 180 aa5.97□□□□□ -1.45
TRAPPC12-222ENST00000493792 CEND1Q8N111 149 aa5.97□□□□□ -1.45
TRAPPC12-222ENST00000493792 BVES-AS1Q5T3Y7 98 aa5.96□□□□□ -1.46
TRAPPC12-222ENST00000493792 HRCT1Q6UXD1 115 aa5.96□□□□□ -1.46
TRAPPC12-222ENST00000493792 LINC00575Q6W349 94 aa5.96□□□□□ -1.46
TRAPPC12-222ENST00000493792 IGLV7-46A0A075B6I9 117 aa5.95□□□□□ -1.46
TRAPPC12-222ENST00000493792 A0A0B4J2C4 111 aa5.95□□□□□ -1.46
TRAPPC12-222ENST00000493792 hADV29S1A0JD25 119 aa5.95□□□□□ -1.46
TRAPPC12-222ENST00000493792 FXYD2P54710 66 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms