RNA–Protein interactions for RNA: ENST00000493726.1

LRCH3-218, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 733 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-218ENST00000493726 HERV-K104P63124 156 aa4.42□□□□□ -1.7
LRCH3-218ENST00000493726 KRTAP5-4Q6L8H1 288 aa4.42□□□□□ -1.7
LRCH3-218ENST00000493726 MUC17Q685J3 4493 aa4.41□□□□□ -1.7
LRCH3-218ENST00000493726 IGKV2D-26A0A0A0MRZ7 120 aa4.41□□□□□ -1.7
LRCH3-218ENST00000493726 A0A0U1RRA0 63 aa4.41□□□□□ -1.7
LRCH3-218ENST00000493726 SERF1AO75920 110 aa4.41□□□□□ -1.7
LRCH3-218ENST00000493726 CRYGAP11844 174 aa4.41□□□□□ -1.7
LRCH3-218ENST00000493726 FAM19A2Q8N3H0 131 aa4.41□□□□□ -1.7
LRCH3-218ENST00000493726 IGKV2-28A0A075B6P5 120 aa4.4□□□□□ -1.71
LRCH3-218ENST00000493726 LINC00587B1AMM8 73 aa4.4□□□□□ -1.71
LRCH3-218ENST00000493726 TMEM238C9JI98 176 aa4.4□□□□□ -1.71
LRCH3-218ENST00000493726 LEPROTL1O95214 131 aa4.4□□□□□ -1.71
LRCH3-218ENST00000493726 IGKV2D-28P01615 120 aa4.4□□□□□ -1.71
LRCH3-218ENST00000493726 PLNP26678 52 aa4.4□□□□□ -1.71
LRCH3-218ENST00000493726 TSPEAR-AS2P59090 65 aa4.4□□□□□ -1.71
LRCH3-218ENST00000493726 PLEKHB2Q96CS7 222 aa4.4□□□□□ -1.71
LRCH3-218ENST00000493726 KCNQ1DNQ9H478 68 aa4.4□□□□□ -1.71
LRCH3-218ENST00000493726 SNRPEP62304 92 aaKnown RBP4.39□□□□□ -1.71
LRCH3-218ENST00000493726 LINC00337Q8N6G1 96 aa4.39□□□□□ -1.71
LRCH3-218ENST00000493726 NDUFA12Q9UI09 145 aa4.39□□□□□ -1.71
LRCH3-218ENST00000493726 TRBV10-2A0A0K0K1G8 114 aa4.38□□□□□ -1.71
LRCH3-218ENST00000493726 LEPROTO15243 131 aa4.38□□□□□ -1.71
LRCH3-218ENST00000493726 SMIM13P0DJ93 91 aa4.38□□□□□ -1.71
LRCH3-218ENST00000493726 NMUP48645 174 aa4.38□□□□□ -1.71
LRCH3-218ENST00000493726 LINC00158P58513 81 aa4.38□□□□□ -1.71
LRCH3-218ENST00000493726 PRLHP81277 87 aa4.38□□□□□ -1.71
LRCH3-218ENST00000493726 MIR7-3HGQ8N6C7 128 aa4.38□□□□□ -1.71
LRCH3-218ENST00000493726 HSPB8Q9UJY1 196 aa4.38□□□□□ -1.71
LRCH3-218ENST00000493726 MYMXA0A1B0GTQ4 84 aa4.37□□□□□ -1.71
LRCH3-218ENST00000493726 KRTAP16-1A8MUX0 517 aa4.37□□□□□ -1.71
LRCH3-218ENST00000493726 J3QQQ9 107 aa4.37□□□□□ -1.71
LRCH3-218ENST00000493726 DPM2O94777 84 aa4.37□□□□□ -1.71
LRCH3-218ENST00000493726 UBE2AP49459 152 aa4.37□□□□□ -1.71
LRCH3-218ENST00000493726 LINC00483Q53H64 154 aa4.37□□□□□ -1.71
LRCH3-218ENST00000493726 COA6Q5JTJ3 125 aaKnown RBP4.37□□□□□ -1.71
LRCH3-218ENST00000493726 TYMSOSQ8TAI1 123 aa4.37□□□□□ -1.71
LRCH3-218ENST00000493726 SPRR4Q96PI1 79 aa4.37□□□□□ -1.71
LRCH3-218ENST00000493726 ANAPC11Q9NYG5 84 aa4.37□□□□□ -1.71
LRCH3-218ENST00000493726 E9PLD3 99 aa4.36□□□□□ -1.71
LRCH3-218ENST00000493726 HIST1H2BKO60814 126 aa4.36□□□□□ -1.71
LRCH3-218ENST00000493726 NDUFC2O95298 119 aa4.36□□□□□ -1.71
LRCH3-218ENST00000493726 HIST1H2BJP06899 126 aa4.36□□□□□ -1.71
LRCH3-218ENST00000493726 HIST1H2BOP23527 126 aa4.36□□□□□ -1.71
LRCH3-218ENST00000493726 HIST1H2BBP33778 126 aa4.36□□□□□ -1.71
LRCH3-218ENST00000493726 HIST1H2BDP58876 126 aa4.36□□□□□ -1.71
LRCH3-218ENST00000493726 HIST1H2BCP62807 126 aa4.36□□□□□ -1.71
LRCH3-218ENST00000493726 HIST2H2BEQ16778 126 aa4.36□□□□□ -1.71
LRCH3-218ENST00000493726 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.36□□□□□ -1.71
LRCH3-218ENST00000493726 FAM19A1Q7Z5A9 133 aa4.36□□□□□ -1.71
LRCH3-218ENST00000493726 BOD1L2Q8IYS8 172 aa4.36□□□□□ -1.71
LRCH3-218ENST00000493726 HIST1H2BHQ93079 126 aa4.36□□□□□ -1.71
LRCH3-218ENST00000493726 HIST1H2BNQ99877 126 aa4.36□□□□□ -1.71
LRCH3-218ENST00000493726 HIST1H2BMQ99879 126 aa4.36□□□□□ -1.71
LRCH3-218ENST00000493726 IGLV6-57P01721 117 aa4.35□□□□□ -1.71
LRCH3-218ENST00000493726 IGKCP01834 107 aa4.35□□□□□ -1.71
LRCH3-218ENST00000493726 MAP1LC3CQ9BXW4 147 aa4.35□□□□□ -1.71
LRCH3-218ENST00000493726 TRBV10-3A0A0K0K1G6 114 aa4.34□□□□□ -1.71
LRCH3-218ENST00000493726 SYS1-DBNDD2H3BUS1 97 aa4.34□□□□□ -1.71
LRCH3-218ENST00000493726 SEC61GP60059 68 aa4.34□□□□□ -1.71
LRCH3-218ENST00000493726 TPRXLQ17RH7 258 aa4.34□□□□□ -1.71
LRCH3-218ENST00000493726 MEIG1Q5JSS6 88 aa4.34□□□□□ -1.71
LRCH3-218ENST00000493726 LINC01545Q5VT33 79 aa4.34□□□□□ -1.71
LRCH3-218ENST00000493726 LINC00304Q8N9R0 145 aa4.34□□□□□ -1.71
LRCH3-218ENST00000493726 SMCR5Q8TEV8 140 aa4.34□□□□□ -1.71
LRCH3-218ENST00000493726 A0A0J9YXY3 114 aa4.33□□□□□ -1.72
LRCH3-218ENST00000493726 HERVK_113P61574 105 aa4.33□□□□□ -1.72
LRCH3-218ENST00000493726 SPAG11AQ6PDA7 123 aa4.33□□□□□ -1.72
LRCH3-218ENST00000493726 SOSTDC1Q6X4U4 206 aa4.33□□□□□ -1.72
LRCH3-218ENST00000493726 PPDPFQ9H3Y8 114 aa4.33□□□□□ -1.72
LRCH3-218ENST00000493726 SPANXB1Q9NS25 103 aaPredicted RBP4.33□□□□□ -1.72
LRCH3-218ENST00000493726 TIMM17BO60830 172 aa4.32□□□□□ -1.72
LRCH3-218ENST00000493726 FABP4P15090 132 aa4.32□□□□□ -1.72
LRCH3-218ENST00000493726 KRTAP5-9P26371 169 aa4.32□□□□□ -1.72
LRCH3-218ENST00000493726 ADAMTSL4-AS1Q5T5F5 129 aa4.32□□□□□ -1.72
LRCH3-218ENST00000493726 Q6ZRX8 168 aa4.32□□□□□ -1.72
LRCH3-218ENST00000493726 C3orf22Q8N5N4 141 aa4.32□□□□□ -1.72
LRCH3-218ENST00000493726 PMCHL2Q9BQD1 86 aa4.32□□□□□ -1.72
LRCH3-218ENST00000493726 Q9BRP9 147 aa4.32□□□□□ -1.72
LRCH3-218ENST00000493726 HIGD2AQ9BW72 106 aa4.32□□□□□ -1.72
LRCH3-218ENST00000493726 ZNF706Q9Y5V0 76 aaPredicted RBP4.32□□□□□ -1.72
LRCH3-218ENST00000493726 NCR3O14931 201 aa4.31□□□□□ -1.72
LRCH3-218ENST00000493726 DDTP30046 118 aa4.31□□□□□ -1.72
LRCH3-218ENST00000493726 RPS29P62273 56 aaKnown RBP4.31□□□□□ -1.72
LRCH3-218ENST00000493726 PRR4Q16378 134 aa4.31□□□□□ -1.72
LRCH3-218ENST00000493726 DAND5Q8N907 189 aa4.31□□□□□ -1.72
LRCH3-218ENST00000493726 TSPAN13O95857 204 aa4.3□□□□□ -1.72
LRCH3-218ENST00000493726 LGALS3P17931 250 aaKnown RBP4.3□□□□□ -1.72
LRCH3-218ENST00000493726 DSCR10P59022 87 aa4.3□□□□□ -1.72
LRCH3-218ENST00000493726 UBE2V1Q13404 147 aa4.3□□□□□ -1.72
LRCH3-218ENST00000493726 ETDCA0A1B0GVM5 59 aa4.29□□□□□ -1.72
LRCH3-218ENST00000493726 ERC2-IT1O76042 136 aa4.29□□□□□ -1.72
LRCH3-218ENST00000493726 C3orf79P0CE67 100 aa4.29□□□□□ -1.72
LRCH3-218ENST00000493726 FP248Q71RG6 208 aaPredicted RBP4.29□□□□□ -1.72
LRCH3-218ENST00000493726 Q75L30 129 aa4.29□□□□□ -1.72
LRCH3-218ENST00000493726 SPINK1P00995 79 aa4.28□□□□□ -1.72
LRCH3-218ENST00000493726 SPRR1BP22528 89 aa4.28□□□□□ -1.72
LRCH3-218ENST00000493726 SSBP3-AS1Q7Z2R9 100 aa4.28□□□□□ -1.72
LRCH3-218ENST00000493726 LINC00308Q8TCZ7 52 aa4.28□□□□□ -1.72
LRCH3-218ENST00000493726 SPANXCQ9NY87 97 aa4.28□□□□□ -1.72
LRCH3-218ENST00000493726 TRAV23DV6A0A075B6W5 121 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms