RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 C6orf99Q4VX62 202 aa1.6□□□□□ -2.15
PTCD3-218ENST00000493430 CLLU1Q5K131 121 aa1.6□□□□□ -2.15
PTCD3-218ENST00000493430 PCP2Q8IVA1 136 aa1.6□□□□□ -2.15
PTCD3-218ENST00000493430 FAM19A2Q8N3H0 131 aa1.6□□□□□ -2.15
PTCD3-218ENST00000493430 DAND5Q8N907 189 aa1.6□□□□□ -2.15
PTCD3-218ENST00000493430 C18orf32Q8TCD1 76 aa1.6□□□□□ -2.15
PTCD3-218ENST00000493430 C20orf78Q9BR46 151 aa1.6□□□□□ -2.15
PTCD3-218ENST00000493430 TIMM21Q9BVV7 248 aa1.6□□□□□ -2.15
PTCD3-218ENST00000493430 SPANXA1Q9NS26 97 aa1.6□□□□□ -2.15
PTCD3-218ENST00000493430 MRPL35Q9NZE8 188 aaKnown RBP1.6□□□□□ -2.15
PTCD3-218ENST00000493430 TP73-AS1Q9UF72 201 aa1.6□□□□□ -2.15
PTCD3-218ENST00000493430 CYSLTR1Q9Y271 337 aa1.6□□□□□ -2.15
PTCD3-218ENST00000493430 C22orf24Q9Y442 160 aa1.6□□□□□ -2.15
PTCD3-218ENST00000493430 TMEM218A2RU14 115 aa1.59□□□□□ -2.15
PTCD3-218ENST00000493430 NDUFC2-KCTD14E9PQ53 114 aa1.59□□□□□ -2.15
PTCD3-218ENST00000493430 NUPR1O60356 82 aa1.59□□□□□ -2.15
PTCD3-218ENST00000493430 ZNF22P17026 224 aaPredicted RBP1.59□□□□□ -2.15
PTCD3-218ENST00000493430 FABP9Q0Z7S8 132 aa1.59□□□□□ -2.15
PTCD3-218ENST00000493430 SPINK6Q6UWN8 80 aa1.59□□□□□ -2.15
PTCD3-218ENST00000493430 OR10D4PQ8NGN7 298 aa1.59□□□□□ -2.15
PTCD3-218ENST00000493430 COX7B2Q8TF08 81 aa1.59□□□□□ -2.15
PTCD3-218ENST00000493430 TOMM6Q96B49 74 aa1.59□□□□□ -2.15
PTCD3-218ENST00000493430 SCGB3A1Q96QR1 104 aa1.59□□□□□ -2.15
PTCD3-218ENST00000493430 KRTAP4-1Q9BYQ7 146 aa1.59□□□□□ -2.15
PTCD3-218ENST00000493430 SPANXB1Q9NS25 103 aaPredicted RBP1.59□□□□□ -2.15
PTCD3-218ENST00000493430 PRO0628Q9UI54 55 aa1.59□□□□□ -2.15
PTCD3-218ENST00000493430 MUC17Q685J3 4493 aa1.59□□□□□ -2.16
PTCD3-218ENST00000493430 IGHV6-1A0A0B4J1U7 121 aa1.58□□□□□ -2.16
PTCD3-218ENST00000493430 A0A0G2JQZ4 141 aa1.58□□□□□ -2.16
PTCD3-218ENST00000493430 A0A0U1RQV1 116 aa1.58□□□□□ -2.16
PTCD3-218ENST00000493430 LINC00862A6NCI5 91 aa1.58□□□□□ -2.16
PTCD3-218ENST00000493430 APOC3P02656 99 aa1.58□□□□□ -2.16
PTCD3-218ENST00000493430 MT-ND4LP03901 98 aa1.58□□□□□ -2.16
PTCD3-218ENST00000493430 TLX1NBP0CAT3 122 aa1.58□□□□□ -2.16
PTCD3-218ENST00000493430 CKS1BP61024 79 aa1.58□□□□□ -2.16
PTCD3-218ENST00000493430 RAB14P61106 215 aa1.58□□□□□ -2.16
PTCD3-218ENST00000493430 ATP5L2Q7Z4Y8 100 aa1.58□□□□□ -2.16
PTCD3-218ENST00000493430 KRTAP13-1Q8IUC0 172 aa1.58□□□□□ -2.16
PTCD3-218ENST00000493430 PACRGQ96M98 296 aaPredicted RBP1.58□□□□□ -2.16
PTCD3-218ENST00000493430 YPEL4Q96NS1 127 aa1.58□□□□□ -2.16
PTCD3-218ENST00000493430 C2orf88Q9BSF0 95 aa1.58□□□□□ -2.16
PTCD3-218ENST00000493430 TTTY13Q9BZ97 58 aa1.58□□□□□ -2.16
PTCD3-218ENST00000493430 CST9LQ9H4G1 147 aa1.58□□□□□ -2.16
PTCD3-218ENST00000493430 SND1-IT1Q9HBX3 110 aa1.58□□□□□ -2.16
PTCD3-218ENST00000493430 TRBV30A0A0K0K1B3 111 aa1.57□□□□□ -2.16
PTCD3-218ENST00000493430 A0A1B0GVX0 72 aa1.57□□□□□ -2.16
PTCD3-218ENST00000493430 F8VRH5 84 aa1.57□□□□□ -2.16
PTCD3-218ENST00000493430 M0R378 163 aa1.57□□□□□ -2.16
PTCD3-218ENST00000493430 ERC2-IT1O76042 136 aa1.57□□□□□ -2.16
PTCD3-218ENST00000493430 PPBPP02775 128 aa1.57□□□□□ -2.16
PTCD3-218ENST00000493430 S100A8P05109 93 aa1.57□□□□□ -2.16
PTCD3-218ENST00000493430 SMIM13P0DJ93 91 aa1.57□□□□□ -2.16
PTCD3-218ENST00000493430 IGLC3P0DOY3 106 aa1.57□□□□□ -2.16
PTCD3-218ENST00000493430 MOBPQ13875 183 aa1.57□□□□□ -2.16
PTCD3-218ENST00000493430 PMVKQ15126 192 aa1.57□□□□□ -2.16
PTCD3-218ENST00000493430 COX19Q49B96 90 aa1.57□□□□□ -2.16
PTCD3-218ENST00000493430 PDZD11Q5EBL8 140 aa1.57□□□□□ -2.16
PTCD3-218ENST00000493430 TMEM170BQ5T4T1 132 aa1.57□□□□□ -2.16
PTCD3-218ENST00000493430 SOSTDC1Q6X4U4 206 aa1.57□□□□□ -2.16
PTCD3-218ENST00000493430 FA2HQ7L5A8 372 aa1.57□□□□□ -2.16
PTCD3-218ENST00000493430 Q8IZM0 81 aa1.57□□□□□ -2.16
PTCD3-218ENST00000493430 DIRC1Q969H9 104 aa1.57□□□□□ -2.16
PTCD3-218ENST00000493430 HIGD2AQ9BW72 106 aa1.57□□□□□ -2.16
PTCD3-218ENST00000493430 SMCO4Q9NRQ5 59 aa1.57□□□□□ -2.16
PTCD3-218ENST00000493430 CARHSP1Q9Y2V2 147 aaKnown RBP1.57□□□□□ -2.16
PTCD3-218ENST00000493430 TRAPPC1Q9Y5R8 145 aa1.57□□□□□ -2.16
PTCD3-218ENST00000493430 TINCRA0A1B0GVN0 87 aa1.56□□□□□ -2.16
PTCD3-218ENST00000493430 BPY2O14599 106 aa1.56□□□□□ -2.16
PTCD3-218ENST00000493430 BCE1O60756 84 aa1.56□□□□□ -2.16
PTCD3-218ENST00000493430 HBDP02042 147 aa1.56□□□□□ -2.16
PTCD3-218ENST00000493430 FABP4P15090 132 aa1.56□□□□□ -2.16
PTCD3-218ENST00000493430 HERVK_113P63121 156 aa1.56□□□□□ -2.16
PTCD3-218ENST00000493430 C10orf91Q5T1B1 145 aa1.56□□□□□ -2.16
PTCD3-218ENST00000493430 FAM19A3Q7Z5A8 133 aa1.56□□□□□ -2.16
PTCD3-218ENST00000493430 BAGE3Q86Y29 109 aa1.56□□□□□ -2.16
PTCD3-218ENST00000493430 SEC11CQ9BY50 192 aa1.56□□□□□ -2.16
PTCD3-218ENST00000493430 TMEM126AQ9H061 195 aa1.56□□□□□ -2.16
PTCD3-218ENST00000493430 NXT2Q9NPJ8 142 aaKnown RBP1.56□□□□□ -2.16
PTCD3-218ENST00000493430 ERG28Q9UKR5 140 aa1.56□□□□□ -2.16
PTCD3-218ENST00000493430 IGKV2D-26A0A0A0MRZ7 120 aa1.55□□□□□ -2.16
PTCD3-218ENST00000493430 TRBV10-3A0A0K0K1G6 114 aa1.55□□□□□ -2.16
PTCD3-218ENST00000493430 TMEM223A0PJW6 202 aa1.55□□□□□ -2.16
PTCD3-218ENST00000493430 LINC01546A6NGU7 62 aa1.55□□□□□ -2.16
PTCD3-218ENST00000493430 K7EMI3 77 aa1.55□□□□□ -2.16
PTCD3-218ENST00000493430 PPP1R17O96001 155 aa1.55□□□□□ -2.16
PTCD3-218ENST00000493430 TRGC2P03986 189 aa1.55□□□□□ -2.16
PTCD3-218ENST00000493430 MIR7-3HGQ8N6C7 128 aa1.55□□□□□ -2.16
PTCD3-218ENST00000493430 LINC00337Q8N6G1 96 aa1.55□□□□□ -2.16
PTCD3-218ENST00000493430 ST20-AS1Q8NBB2 130 aa1.55□□□□□ -2.16
PTCD3-218ENST00000493430 PLEKHB2Q96CS7 222 aa1.55□□□□□ -2.16
PTCD3-218ENST00000493430 GNB1LQ9BYB4 327 aa1.55□□□□□ -2.16
PTCD3-218ENST00000493430 C8orf17Q9NRJ1 99 aa1.55□□□□□ -2.16
PTCD3-218ENST00000493430 LINC00474Q9P2X8 69 aa1.55□□□□□ -2.16
PTCD3-218ENST00000493430 LAMTOR2Q9Y2Q5 125 aa1.55□□□□□ -2.16
PTCD3-218ENST00000493430 H7C2G1 150 aa1.54□□□□□ -2.16
PTCD3-218ENST00000493430 LINC00614P0C842 121 aa1.54□□□□□ -2.16
PTCD3-218ENST00000493430 S100PP25815 95 aa1.54□□□□□ -2.16
PTCD3-218ENST00000493430 LINC00158P58513 81 aa1.54□□□□□ -2.16
PTCD3-218ENST00000493430 SMAGPQ0VAQ4 97 aa1.54□□□□□ -2.16
PTCD3-218ENST00000493430 RHEBQ15382 184 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms