RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 PLA2G2DQ9UNK4 145 aa10.75□□□□□ -0.69
BRAT1-206ENST00000493232 ACANP16112 2415 aa10.75□□□□□ -0.69
BRAT1-206ENST00000493232 TLX1NBP0CAT3 122 aa10.75□□□□□ -0.69
BRAT1-206ENST00000493232 LINC00304Q8N9R0 145 aa10.75□□□□□ -0.69
BRAT1-206ENST00000493232 C8orf17Q9NRJ1 99 aa10.74□□□□□ -0.69
BRAT1-206ENST00000493232 C4orf26Q17RF5 130 aa10.73□□□□□ -0.69
BRAT1-206ENST00000493232 PRR15Q8IV56 129 aa10.73□□□□□ -0.69
BRAT1-206ENST00000493232 GIG44P09565 113 aaPredicted RBP10.73□□□□□ -0.69
BRAT1-206ENST00000493232 A0A087WTM6 91 aa10.72□□□□□ -0.69
BRAT1-206ENST00000493232 IGLV8-61A0A075B6I0 122 aa10.72□□□□□ -0.69
BRAT1-206ENST00000493232 C9orf163Q8N9P6 203 aa10.71□□□□□ -0.69
BRAT1-206ENST00000493232 COA5Q86WW8 74 aa10.71□□□□□ -0.69
BRAT1-206ENST00000493232 FLNBO75369 2602 aaKnown RBP10.71□□□□□ -0.7
BRAT1-206ENST00000493232 C9orf129Q5T035 196 aaKnown RBP10.71□□□□□ -0.7
BRAT1-206ENST00000493232 A0A1B0GVX0 72 aa10.7□□□□□ -0.7
BRAT1-206ENST00000493232 LINC01600Q96MT4 127 aa10.7□□□□□ -0.7
BRAT1-206ENST00000493232 DSCR10P59022 87 aa10.69□□□□□ -0.7
BRAT1-206ENST00000493232 CYP4F30PQ9H0H9 118 aa10.68□□□□□ -0.7
BRAT1-206ENST00000493232 KRTAP10-3P60369 221 aa10.68□□□□□ -0.7
BRAT1-206ENST00000493232 Q8N377 158 aa10.68□□□□□ -0.7
BRAT1-206ENST00000493232 COX6B2Q6YFQ2 88 aa10.68□□□□□ -0.7
BRAT1-206ENST00000493232 EIF4EBP3O60516 100 aaPredicted RBP10.66□□□□□ -0.7
BRAT1-206ENST00000493232 UQCR11O14957 56 aa10.65□□□□□ -0.7
BRAT1-206ENST00000493232 LINC00336Q6ZUF6 198 aa10.64□□□□□ -0.71
BRAT1-206ENST00000493232 OBSCN-AS1Q96MR7 158 aa10.63□□□□□ -0.71
BRAT1-206ENST00000493232 PCNTO95613 3336 aa10.63□□□□□ -0.71
BRAT1-206ENST00000493232 IGLV7-43P04211 117 aa10.62□□□□□ -0.71
BRAT1-206ENST00000493232 CNBPP62633 177 aaKnown RBP10.61□□□□□ -0.71
BRAT1-206ENST00000493232 KLKP1Q107X0 134 aa10.6□□□□□ -0.71
BRAT1-206ENST00000493232 A8MUN3 132 aa10.59□□□□□ -0.71
BRAT1-206ENST00000493232 APLNQ9ULZ1 77 aa10.59□□□□□ -0.71
BRAT1-206ENST00000493232 HECTD1Q9ULT8 2610 aa10.58□□□□□ -0.72
BRAT1-206ENST00000493232 ZNF575Q86XF7 245 aa10.57□□□□□ -0.72
BRAT1-206ENST00000493232 SPRR4Q96PI1 79 aa10.57□□□□□ -0.72
BRAT1-206ENST00000493232 CHD7Q9P2D1 2997 aa10.57□□□□□ -0.72
BRAT1-206ENST00000493232 SPINT4Q6UDR6 99 aa10.57□□□□□ -0.72
BRAT1-206ENST00000493232 C9orf92A6NGG3 77 aa10.56□□□□□ -0.72
BRAT1-206ENST00000493232 PSORS1C2Q9UIG4 136 aa10.56□□□□□ -0.72
BRAT1-206ENST00000493232 PRRC2CQ9Y520 2896 aaKnown RBP10.55□□□□□ -0.72
BRAT1-206ENST00000493232 A0A1W2PNN7 141 aa10.55□□□□□ -0.72
BRAT1-206ENST00000493232 SMR3BP02814 79 aaPredicted RBP10.53□□□□□ -0.72
BRAT1-206ENST00000493232 KRTAP1-3Q8IUG1 177 aa10.52□□□□□ -0.72
BRAT1-206ENST00000493232 MIR22HGQ0VDD5 57 aa10.52□□□□□ -0.73
BRAT1-206ENST00000493232 IGLV5-37A0A075B6J1 123 aa10.51□□□□□ -0.73
BRAT1-206ENST00000493232 RBM12B-AS1Q9P1G2 102 aa10.5□□□□□ -0.73
BRAT1-206ENST00000493232 A0A0G2JQZ4 141 aa10.5□□□□□ -0.73
BRAT1-206ENST00000493232 ANAPC11Q9NYG5 84 aa10.5□□□□□ -0.73
BRAT1-206ENST00000493232 CRIPTQ9P021 101 aa10.5□□□□□ -0.73
BRAT1-206ENST00000493232 CASC10Q5T4H9 136 aa10.49□□□□□ -0.73
BRAT1-206ENST00000493232 HTTP42858 3142 aa10.48□□□□□ -0.73
BRAT1-206ENST00000493232 A0A1W2PNM2 257 aa10.48□□□□□ -0.73
BRAT1-206ENST00000493232 KRTAP1-1Q07627 177 aa10.48□□□□□ -0.73
BRAT1-206ENST00000493232 BPTFQ12830 3046 aa10.46□□□□□ -0.74
BRAT1-206ENST00000493232 C5orf42Q9H799 3197 aa10.45□□□□□ -0.74
BRAT1-206ENST00000493232 CHD9Q3L8U1 2897 aa10.44□□□□□ -0.74
BRAT1-206ENST00000493232 H7BZZ5 65 aa10.43□□□□□ -0.74
BRAT1-206ENST00000493232 SPANXA2-OT1Q8N9U9 137 aa10.43□□□□□ -0.74
BRAT1-206ENST00000493232 IGLV5-48A0A075B6I7 105 aa10.43□□□□□ -0.74
BRAT1-206ENST00000493232 CD164Q04900 197 aa10.39□□□□□ -0.75
BRAT1-206ENST00000493232 FAM104AQ969W3 186 aa10.39□□□□□ -0.75
BRAT1-206ENST00000493232 MGAM2Q2M2H8 2515 aa10.33□□□□□ -0.76
BRAT1-206ENST00000493232 HELZ2Q9BYK8 2649 aaKnown RBP10.32□□□□□ -0.76
BRAT1-206ENST00000493232 Q8N1X5 172 aa10.31□□□□□ -0.76
BRAT1-206ENST00000493232 TNP2Q05952 138 aa10.3□□□□□ -0.76
BRAT1-206ENST00000493232 CDC42SE1Q9NRR8 79 aa10.3□□□□□ -0.76
BRAT1-206ENST00000493232 USP24Q9UPU5 2620 aa10.29□□□□□ -0.76
BRAT1-206ENST00000493232 RANBP2P49792 3224 aaKnown RBP10.27□□□□□ -0.77
BRAT1-206ENST00000493232 WIPF1O43516 503 aa10.27□□□□□ -0.77
BRAT1-206ENST00000493232 LINC01554Q52M75 96 aa10.26□□□□□ -0.77
BRAT1-206ENST00000493232 TRANK1O15050 2925 aa10.25□□□□□ -0.77
BRAT1-206ENST00000493232 FAM229BQ4G0N7 80 aa10.25□□□□□ -0.77
BRAT1-206ENST00000493232 Q6ZSA8 131 aa10.25□□□□□ -0.77
BRAT1-206ENST00000493232 A0A0D9SG42 100 aa10.23□□□□□ -0.77
BRAT1-206ENST00000493232 OCR1Q9BZK8 76 aa10.23□□□□□ -0.77
BRAT1-206ENST00000493232 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.22□□□□□ -0.77
BRAT1-206ENST00000493232 IGLV7-46A0A075B6I9 117 aa10.21□□□□□ -0.77
BRAT1-206ENST00000493232 KTN1-AS1Q86SY8 53 aa10.21□□□□□ -0.77
BRAT1-206ENST00000493232 FLNAP21333 2647 aaKnown RBP10.21□□□□□ -0.78
BRAT1-206ENST00000493232 LCA10Q71F78 164 aa10.19□□□□□ -0.78
BRAT1-206ENST00000493232 PRR26Q8N8Z3 221 aa10.18□□□□□ -0.78
BRAT1-206ENST00000493232 ITPR3Q14573 2671 aa10.17□□□□□ -0.78
BRAT1-206ENST00000493232 PLAC8Q9NZF1 115 aa10.16□□□□□ -0.78
BRAT1-206ENST00000493232 CFAP46Q8IYW2 2715 aa10.15□□□□□ -0.78
BRAT1-206ENST00000493232 MKI67P46013 3256 aaKnown RBP10.15□□□□□ -0.78
BRAT1-206ENST00000493232 LAMA3Q16787 3333 aa10.11□□□□□ -0.79
BRAT1-206ENST00000493232 ZNF292O60281 2723 aa10.11□□□□□ -0.79
BRAT1-206ENST00000493232 HRES1P13985 223 aa10.11□□□□□ -0.79
BRAT1-206ENST00000493232 Q1T7F1 81 aa10.11□□□□□ -0.79
BRAT1-206ENST00000493232 ATRQ13535 2644 aa10.1□□□□□ -0.79
BRAT1-206ENST00000493232 SPRR1AP35321 89 aa10.1□□□□□ -0.79
BRAT1-206ENST00000493232 CR1P17927 2039 aa10.08□□□□□ -0.8
BRAT1-206ENST00000493232 A0A1B0GU33 70 aa10.07□□□□□ -0.8
BRAT1-206ENST00000493232 MAST4O15021 2626 aa10.07□□□□□ -0.8
BRAT1-206ENST00000493232 ZCCHC13Q8WW36 166 aaKnown RBP10.07□□□□□ -0.8
BRAT1-206ENST00000493232 MMP24-AS1A0A0U1RRL7 71 aa10.06□□□□□ -0.8
BRAT1-206ENST00000493232 CENPEQ02224 2701 aa10.06□□□□□ -0.8
BRAT1-206ENST00000493232 CAMK2N1Q7Z7J9 78 aa10.05□□□□□ -0.8
BRAT1-206ENST00000493232 BRCA2P51587 3418 aa10.04□□□□□ -0.8
BRAT1-206ENST00000493232 SPRR1BP22528 89 aa10.04□□□□□ -0.8
BRAT1-206ENST00000493232 A0A0C4DFX4 3053 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms