RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 PIGYQ3MUY2 71 aa2.14□□□□□ -2.07
BRCA1-220ENST00000492859 CCL22O00626 93 aa2.13□□□□□ -2.07
BRCA1-220ENST00000492859 PCOTHQ58A44 107 aa2.13□□□□□ -2.07
BRCA1-220ENST00000492859 ICE1Q9Y2F5 2266 aa2.12□□□□□ -2.07
BRCA1-220ENST00000492859 H0YAA0 97 aa2.11□□□□□ -2.07
BRCA1-220ENST00000492859 MINOS1Q5TGZ0 78 aa2.11□□□□□ -2.07
BRCA1-220ENST00000492859 LEAP2Q969E1 77 aa2.11□□□□□ -2.07
BRCA1-220ENST00000492859 PLCE1Q9P212 2302 aa2.11□□□□□ -2.07
BRCA1-220ENST00000492859 IGKV2-24A0A0C4DH68 120 aa2.1□□□□□ -2.07
BRCA1-220ENST00000492859 PRCDQ00LT1 54 aa2.1□□□□□ -2.07
BRCA1-220ENST00000492859 PP632Q6XCG6 107 aa2.1□□□□□ -2.07
BRCA1-220ENST00000492859 WFDC13Q8IUB5 93 aa2.1□□□□□ -2.07
BRCA1-220ENST00000492859 TP53AIP1Q9HCN2 124 aa2.1□□□□□ -2.07
BRCA1-220ENST00000492859 C6orf48Q9UBA6 75 aa2.1□□□□□ -2.07
BRCA1-220ENST00000492859 USF3Q68DE3 2245 aa2.1□□□□□ -2.07
BRCA1-220ENST00000492859 PRR9Q5T870 116 aa2.09□□□□□ -2.08
BRCA1-220ENST00000492859 KRTAP5-2Q701N4 177 aa2.09□□□□□ -2.08
BRCA1-220ENST00000492859 MRPL34Q9BQ48 92 aaKnown RBP2.09□□□□□ -2.08
BRCA1-220ENST00000492859 ATRXP46100 2492 aa2.08□□□□□ -2.08
BRCA1-220ENST00000492859 KRTAP10-6P60371 365 aaPredicted RBP2.08□□□□□ -2.08
BRCA1-220ENST00000492859 CNTRLQ7Z7A1 2325 aa2.07□□□□□ -2.08
BRCA1-220ENST00000492859 IGLV5-48A0A075B6I7 105 aa2.07□□□□□ -2.08
BRCA1-220ENST00000492859 WFDC10BQ8IUB3 73 aa2.07□□□□□ -2.08
BRCA1-220ENST00000492859 UBE2DNLQ8IWF7 75 aa2.07□□□□□ -2.08
BRCA1-220ENST00000492859 ALMS1Q8TCU4 4167 aa2.07□□□□□ -2.08
BRCA1-220ENST00000492859 FLG2Q5D862 2391 aaPredicted RBP2.07□□□□□ -2.08
BRCA1-220ENST00000492859 RPL37P61927 97 aaKnown RBP2.06□□□□□ -2.08
BRCA1-220ENST00000492859 ZDBF2Q9HCK1 2354 aa2.06□□□□□ -2.08
BRCA1-220ENST00000492859 COX6B2Q6YFQ2 88 aa2.06□□□□□ -2.08
BRCA1-220ENST00000492859 C10orf95Q9H7T3 257 aa2.06□□□□□ -2.08
BRCA1-220ENST00000492859 CACNA1BQ00975 2339 aa2.06□□□□□ -2.08
BRCA1-220ENST00000492859 SPINK13Q1W4C9 94 aa2.05□□□□□ -2.08
BRCA1-220ENST00000492859 Q6ZSA8 131 aa2.05□□□□□ -2.08
BRCA1-220ENST00000492859 LYNX1P0DP58 116 aa2.04□□□□□ -2.08
BRCA1-220ENST00000492859 LELP1Q5T871 98 aa2.04□□□□□ -2.08
BRCA1-220ENST00000492859 IGF2RP11717 2491 aa2.04□□□□□ -2.08
BRCA1-220ENST00000492859 M0QY20 66 aa2.03□□□□□ -2.08
BRCA1-220ENST00000492859 KRTAP1-4P0C5Y4 121 aa2.03□□□□□ -2.08
BRCA1-220ENST00000492859 COX6A2Q02221 97 aa2.03□□□□□ -2.08
BRCA1-220ENST00000492859 DEFB106AQ8N104 65 aa2.02□□□□□ -2.09
BRCA1-220ENST00000492859 DEFB123Q8N688 67 aa2.02□□□□□ -2.09
BRCA1-220ENST00000492859 PIEZO2Q9H5I5 2752 aa2.02□□□□□ -2.09
BRCA1-220ENST00000492859 NAV3Q8IVL0 2385 aa2.02□□□□□ -2.09
BRCA1-220ENST00000492859 HMCN1Q96RW7 5635 aa2.02□□□□□ -2.09
BRCA1-220ENST00000492859 USMG5Q96IX5 58 aa2.02□□□□□ -2.09
BRCA1-220ENST00000492859 OTOGLQ3ZCN5 2332 aa2.02□□□□□ -2.09
BRCA1-220ENST00000492859 FAM208BQ5VWN6 2430 aa2.01□□□□□ -2.09
BRCA1-220ENST00000492859 LCE1EQ5T753 118 aa2.01□□□□□ -2.09
BRCA1-220ENST00000492859 KAAG1Q9UBP8 84 aa2.01□□□□□ -2.09
BRCA1-220ENST00000492859 MMP24-AS1A0A0U1RRL7 71 aa1.99□□□□□ -2.09
BRCA1-220ENST00000492859 DEFB130BP0DP73 79 aa1.99□□□□□ -2.09
BRCA1-220ENST00000492859 DEFB130AP0DP74 79 aa1.99□□□□□ -2.09
BRCA1-220ENST00000492859 H1FX-AS1Q4G0G2 97 aa1.99□□□□□ -2.09
BRCA1-220ENST00000492859 UNQ6190/PRO20217Q6UXQ8 127 aa1.99□□□□□ -2.09
BRCA1-220ENST00000492859 CACNA1GO43497 2377 aa1.99□□□□□ -2.09
BRCA1-220ENST00000492859 DEFB104AQ8WTQ1 72 aa1.98□□□□□ -2.09
BRCA1-220ENST00000492859 WT1-ASQ06250 92 aa1.98□□□□□ -2.09
BRCA1-220ENST00000492859 JMJD1CQ15652 2540 aa1.97□□□□□ -2.09
BRCA1-220ENST00000492859 A0A1B0GVY2 172 aa1.97□□□□□ -2.09
BRCA1-220ENST00000492859 KRTAP13-4Q3LI77 160 aa1.97□□□□□ -2.09
BRCA1-220ENST00000492859 TPRP12270 2363 aaKnown RBP1.96□□□□□ -2.1
BRCA1-220ENST00000492859 WNK2Q9Y3S1 2297 aa1.96□□□□□ -2.1
BRCA1-220ENST00000492859 TMEM167AQ8TBQ9 72 aa1.96□□□□□ -2.1
BRCA1-220ENST00000492859 A8MTW9 85 aa1.95□□□□□ -2.1
BRCA1-220ENST00000492859 DEFB131AP59861 70 aa1.95□□□□□ -2.1
BRCA1-220ENST00000492859 PTPRZ1P23471 2315 aaPredicted RBP1.95□□□□□ -2.1
BRCA1-220ENST00000492859 PCNX1Q96RV3 2341 aa1.95□□□□□ -2.1
BRCA1-220ENST00000492859 KRTAP4-3Q9BYR4 195 aa1.94□□□□□ -2.1
BRCA1-220ENST00000492859 PKDREJQ9NTG1 2253 aa1.94□□□□□ -2.1
BRCA1-220ENST00000492859 SPRR5A0A1B0GTR4 108 aa1.93□□□□□ -2.1
BRCA1-220ENST00000492859 RPL39P5Q59GN2 51 aa1.93□□□□□ -2.1
BRCA1-220ENST00000492859 TOMM7Q9P0U1 55 aa1.93□□□□□ -2.1
BRCA1-220ENST00000492859 MT3P25713 68 aa1.93□□□□□ -2.1
BRCA1-220ENST00000492859 KRTAP13-3Q3SY46 172 aa1.92□□□□□ -2.1
BRCA1-220ENST00000492859 BRD3OSQ6XYD6 125 aa1.92□□□□□ -2.1
BRCA1-220ENST00000492859 OBSCNQ5VST9 7968 aa1.91□□□□□ -2.1
BRCA1-220ENST00000492859 KRTAP5-8O75690 187 aa1.91□□□□□ -2.1
BRCA1-220ENST00000492859 KRTAP10-1P60331 282 aa1.91□□□□□ -2.1
BRCA1-220ENST00000492859 K7EIM0 57 aa1.9□□□□□ -2.1
BRCA1-220ENST00000492859 LCE1FQ5T754 118 aa1.9□□□□□ -2.1
BRCA1-220ENST00000492859 CLPSL2Q6UWE3 100 aa1.9□□□□□ -2.1
BRCA1-220ENST00000492859 DEFB108AA8MXU0 73 aa1.89□□□□□ -2.11
BRCA1-220ENST00000492859 DEFB103AP81534 67 aa1.89□□□□□ -2.11
BRCA1-220ENST00000492859 DEFB105AQ8NG35 78 aa1.89□□□□□ -2.11
BRCA1-220ENST00000492859 REV3LO60673 3130 aa1.89□□□□□ -2.11
BRCA1-220ENST00000492859 K7EIL1 84 aa1.89□□□□□ -2.11
BRCA1-220ENST00000492859 SPRR1AP35321 89 aa1.89□□□□□ -2.11
BRCA1-220ENST00000492859 APLNQ9ULZ1 77 aa1.89□□□□□ -2.11
BRCA1-220ENST00000492859 ZNF462Q96JM2 2506 aa1.88□□□□□ -2.11
BRCA1-220ENST00000492859 ROS1P08922 2347 aa1.88□□□□□ -2.11
BRCA1-220ENST00000492859 KRTAP10-3P60369 221 aa1.88□□□□□ -2.11
BRCA1-220ENST00000492859 BAHCC1Q9P281 2608 aa1.88□□□□□ -2.11
BRCA1-220ENST00000492859 NOTCH3Q9UM47 2321 aa1.87□□□□□ -2.11
BRCA1-220ENST00000492859 KRTAP10-5P60370 271 aa1.86□□□□□ -2.11
BRCA1-220ENST00000492859 DSPP15924 2871 aaKnown RBP1.86□□□□□ -2.11
BRCA1-220ENST00000492859 PRO0255Q9UI72 69 aa1.85□□□□□ -2.11
BRCA1-220ENST00000492859 CSPG4Q6UVK1 2322 aa1.85□□□□□ -2.11
BRCA1-220ENST00000492859 CHD7Q9P2D1 2997 aa1.85□□□□□ -2.11
BRCA1-220ENST00000492859 PRLHP81277 87 aa1.85□□□□□ -2.11
BRCA1-220ENST00000492859 H3BUA1 57 aa1.84□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 147.5 ms