RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 PSPHP1O15172 72 aa3.08□□□□□ -1.92
TRA2B-215ENST00000492417 CRYGAP11844 174 aa3.08□□□□□ -1.92
TRA2B-215ENST00000492417 TSPEAR-AS2P59090 65 aa3.08□□□□□ -1.92
TRA2B-215ENST00000492417 PRO0461Q9UI25 63 aa3.08□□□□□ -1.92
TRA2B-215ENST00000492417 SYCNQ0VAF6 134 aa3.08□□□□□ -1.92
TRA2B-215ENST00000492417 FAM19A1Q7Z5A9 133 aa3.08□□□□□ -1.92
TRA2B-215ENST00000492417 ZNF469Q96JG9 3925 aaPredicted RBP3.07□□□□□ -1.92
TRA2B-215ENST00000492417 UBE2AP49459 152 aa3.07□□□□□ -1.92
TRA2B-215ENST00000492417 C14orf177Q52M58 125 aa3.07□□□□□ -1.92
TRA2B-215ENST00000492417 TRBV7-6A0A0J9YX20 115 aa3.07□□□□□ -1.92
TRA2B-215ENST00000492417 WFDC13Q8IUB5 93 aa3.07□□□□□ -1.92
TRA2B-215ENST00000492417 LINC00846Q9NV44 126 aa3.07□□□□□ -1.92
TRA2B-215ENST00000492417 IGLV4-69A0A075B6H9 119 aa3.07□□□□□ -1.92
TRA2B-215ENST00000492417 NBDYA0A0U1RRE5 68 aa3.07□□□□□ -1.92
TRA2B-215ENST00000492417 KRTAP21-3Q3LHN1 58 aa3.07□□□□□ -1.92
TRA2B-215ENST00000492417 RPL28P46779 137 aaKnown RBP3.06□□□□□ -1.92
TRA2B-215ENST00000492417 COX6A2Q02221 97 aa3.06□□□□□ -1.92
TRA2B-215ENST00000492417 C9orf116Q5BN46 136 aaPredicted RBP3.06□□□□□ -1.92
TRA2B-215ENST00000492417 CASC10Q5T4H9 136 aa3.06□□□□□ -1.92
TRA2B-215ENST00000492417 C6orf223Q8N319 242 aa3.06□□□□□ -1.92
TRA2B-215ENST00000492417 IGLV5-52A0A0A0MRZ9 124 aa3.06□□□□□ -1.92
TRA2B-215ENST00000492417 PRYO14603 147 aa3.06□□□□□ -1.92
TRA2B-215ENST00000492417 ADAMTSL4-AS1Q5T5F5 129 aa3.06□□□□□ -1.92
TRA2B-215ENST00000492417 LINC00242Q5T6M2 205 aa3.06□□□□□ -1.92
TRA2B-215ENST00000492417 UNQ6190/PRO20217Q6UXQ8 127 aa3.06□□□□□ -1.92
TRA2B-215ENST00000492417 FAM30AQ9NZY2 134 aa3.06□□□□□ -1.92
TRA2B-215ENST00000492417 PRR15LQ9BU68 103 aa3.06□□□□□ -1.92
TRA2B-215ENST00000492417 LINC01556Q5JQF7 62 aa3.05□□□□□ -1.92
TRA2B-215ENST00000492417 Q8N9L7 120 aa3.05□□□□□ -1.92
TRA2B-215ENST00000492417 TMEM254Q8TBM7 123 aa3.05□□□□□ -1.92
TRA2B-215ENST00000492417 TENM3Q9P273 2699 aa3.05□□□□□ -1.92
TRA2B-215ENST00000492417 A0A087WZ39 114 aa3.05□□□□□ -1.92
TRA2B-215ENST00000492417 A0A096LNI7 61 aa3.05□□□□□ -1.92
TRA2B-215ENST00000492417 DNAH10OSP0CZ25 163 aa3.05□□□□□ -1.92
TRA2B-215ENST00000492417 HIGD2AQ9BW72 106 aa3.05□□□□□ -1.92
TRA2B-215ENST00000492417 APLNQ9ULZ1 77 aa3.05□□□□□ -1.92
TRA2B-215ENST00000492417 ANK3Q12955 4377 aaKnown RBP3.05□□□□□ -1.92
TRA2B-215ENST00000492417 LINC00336Q6ZUF6 198 aa3.05□□□□□ -1.92
TRA2B-215ENST00000492417 LINC00208Q96KT6 92 aa3.05□□□□□ -1.92
TRA2B-215ENST00000492417 TRRAPQ9Y4A5 3859 aa3.04□□□□□ -1.92
TRA2B-215ENST00000492417 H3BNG1 76 aa3.04□□□□□ -1.92
TRA2B-215ENST00000492417 A0A087WYN8 130 aa3.04□□□□□ -1.92
TRA2B-215ENST00000492417 A0A1B0GUV1 79 aa3.04□□□□□ -1.92
TRA2B-215ENST00000492417 K7ERS5 55 aa3.04□□□□□ -1.92
TRA2B-215ENST00000492417 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.04□□□□□ -1.92
TRA2B-215ENST00000492417 LINC00612Q8N6U2 182 aa3.04□□□□□ -1.92
TRA2B-215ENST00000492417 Q8N814 137 aa3.04□□□□□ -1.92
TRA2B-215ENST00000492417 CASC2Q6XLA1 102 aa3.03□□□□□ -1.92
TRA2B-215ENST00000492417 IGKV2-28A0A075B6P5 120 aa3.03□□□□□ -1.92
TRA2B-215ENST00000492417 SMIM1B2RUZ4 78 aa3.03□□□□□ -1.92
TRA2B-215ENST00000492417 IGKV2D-28P01615 120 aa3.03□□□□□ -1.92
TRA2B-215ENST00000492417 C16orf90A8MZG2 172 aa3.03□□□□□ -1.93
TRA2B-215ENST00000492417 Q6ZVQ6 151 aa3.03□□□□□ -1.93
TRA2B-215ENST00000492417 LINC00476Q8WZB0 136 aa3.03□□□□□ -1.93
TRA2B-215ENST00000492417 TENM2Q9NT68 2774 aa3.02□□□□□ -1.93
TRA2B-215ENST00000492417 ANK2Q01484 3957 aa3.02□□□□□ -1.93
TRA2B-215ENST00000492417 TRBV10-3A0A0K0K1G6 114 aa3.02□□□□□ -1.93
TRA2B-215ENST00000492417 RPL37AP8A6NKH3 93 aa3.02□□□□□ -1.93
TRA2B-215ENST00000492417 ZNF575Q86XF7 245 aa3.02□□□□□ -1.93
TRA2B-215ENST00000492417 Q6ZRU5 148 aa3.02□□□□□ -1.93
TRA2B-215ENST00000492417 ZNF73O43830 326 aaPredicted RBP3.02□□□□□ -1.93
TRA2B-215ENST00000492417 AMELXQ99217 191 aa3.02□□□□□ -1.93
TRA2B-215ENST00000492417 LINC01547P58512 204 aaPredicted RBP3.01□□□□□ -1.93
TRA2B-215ENST00000492417 PRR3P79522 188 aaKnown RBP3.01□□□□□ -1.93
TRA2B-215ENST00000492417 M0R378 163 aa3.01□□□□□ -1.93
TRA2B-215ENST00000492417 CHTF8P0CG12 524 aa3□□□□□ -1.93
TRA2B-215ENST00000492417 Q8IZM0 81 aa3□□□□□ -1.93
TRA2B-215ENST00000492417 IGHV3OR16-9A0A0B4J2B5 98 aa3□□□□□ -1.93
TRA2B-215ENST00000492417 BCE1O60756 84 aa3□□□□□ -1.93
TRA2B-215ENST00000492417 CXCL6P80162 114 aa3□□□□□ -1.93
TRA2B-215ENST00000492417 LINC00575Q6W349 94 aa3□□□□□ -1.93
TRA2B-215ENST00000492417 C7orf33Q8WU49 177 aa3□□□□□ -1.93
TRA2B-215ENST00000492417 COX17Q14061 63 aa3□□□□□ -1.93
TRA2B-215ENST00000492417 C10orf25Q5T742 122 aa3□□□□□ -1.93
TRA2B-215ENST00000492417 LINC00337Q8N6G1 96 aa3□□□□□ -1.93
TRA2B-215ENST00000492417 RTL8CO15255 209 aa3□□□□□ -1.93
TRA2B-215ENST00000492417 LCE2DQ5TA82 110 aaPredicted RBP3□□□□□ -1.93
TRA2B-215ENST00000492417 DHRS4-AS1Q9P1J3 65 aa3□□□□□ -1.93
TRA2B-215ENST00000492417 LIMD2Q9BT23 127 aa2.99□□□□□ -1.93
TRA2B-215ENST00000492417 SMR3BP02814 79 aaPredicted RBP2.99□□□□□ -1.93
TRA2B-215ENST00000492417 C1orf137Q5JT78 98 aa2.99□□□□□ -1.93
TRA2B-215ENST00000492417 PCOTHQ58A44 107 aa2.98□□□□□ -1.93
TRA2B-215ENST00000492417 A0A087WTM6 91 aa2.98□□□□□ -1.93
TRA2B-215ENST00000492417 PLA2G2DQ9UNK4 145 aa2.98□□□□□ -1.93
TRA2B-215ENST00000492417 hDV103S1A0JD37 113 aa2.97□□□□□ -1.93
TRA2B-215ENST00000492417 LINC01546A6NGU7 62 aa2.97□□□□□ -1.93
TRA2B-215ENST00000492417 SPINK6Q6UWN8 80 aa2.97□□□□□ -1.93
TRA2B-215ENST00000492417 C6orf48Q9UBA6 75 aa2.97□□□□□ -1.93
TRA2B-215ENST00000492417 H0Y9P7 68 aa2.97□□□□□ -1.93
TRA2B-215ENST00000492417 FAM218AQ96MZ4 157 aa2.97□□□□□ -1.93
TRA2B-215ENST00000492417 KRTAP1-5Q9BYS1 174 aa2.97□□□□□ -1.93
TRA2B-215ENST00000492417 C2orf48Q96LS8 159 aa2.96□□□□□ -1.94
TRA2B-215ENST00000492417 IGLV5-39A0A0G2JS06 123 aa2.96□□□□□ -1.94
TRA2B-215ENST00000492417 LINC00474Q9P2X8 69 aa2.96□□□□□ -1.94
TRA2B-215ENST00000492417 DEFB116Q30KQ4 102 aa2.95□□□□□ -1.94
TRA2B-215ENST00000492417 PRR34Q9NV39 138 aa2.95□□□□□ -1.94
TRA2B-215ENST00000492417 LCE6AA0A183 80 aa2.95□□□□□ -1.94
TRA2B-215ENST00000492417 SMCR5Q8TEV8 140 aa2.95□□□□□ -1.94
TRA2B-215ENST00000492417 PHF5AQ7RTV0 110 aaKnown RBP2.95□□□□□ -1.94
TRA2B-215ENST00000492417 SMIM29Q86T20 159 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms