RNA–Protein interactions for RNA: ENST00000491915.1

COL6A4P1-203, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 5

Gene COL6A4P1, Length 1,251 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-203ENST00000491915 RNF213Q63HN8 5207 aa5.14□□□□□ -1.59
COL6A4P1-203ENST00000491915 B5MCH6 92 aa5.13□□□□□ -1.59
COL6A4P1-203ENST00000491915 E9PLD3 99 aa5.13□□□□□ -1.59
COL6A4P1-203ENST00000491915 HERVK_113P61574 105 aa5.13□□□□□ -1.59
COL6A4P1-203ENST00000491915 LCE2DQ5TA82 110 aaPredicted RBP5.13□□□□□ -1.59
COL6A4P1-203ENST00000491915 PPDPFQ9H3Y8 114 aa5.13□□□□□ -1.59
COL6A4P1-203ENST00000491915 TRBV10-2A0A0K0K1G8 114 aa5.12□□□□□ -1.59
COL6A4P1-203ENST00000491915 ETDCA0A1B0GVM5 59 aa5.12□□□□□ -1.59
COL6A4P1-203ENST00000491915 NMUP48645 174 aa5.12□□□□□ -1.59
COL6A4P1-203ENST00000491915 NPC2P61916 151 aa5.12□□□□□ -1.59
COL6A4P1-203ENST00000491915 LINC01545Q5VT33 79 aa5.12□□□□□ -1.59
COL6A4P1-203ENST00000491915 C12orf57Q99622 126 aa5.12□□□□□ -1.59
COL6A4P1-203ENST00000491915 A0A1B0GV72 72 aa5.11□□□□□ -1.59
COL6A4P1-203ENST00000491915 IGLV6-57P01721 117 aa5.11□□□□□ -1.59
COL6A4P1-203ENST00000491915 C3orf79P0CE67 100 aa5.11□□□□□ -1.59
COL6A4P1-203ENST00000491915 DDTP30046 118 aa5.11□□□□□ -1.59
COL6A4P1-203ENST00000491915 LITAFQ99732 161 aa5.11□□□□□ -1.59
COL6A4P1-203ENST00000491915 Q9BRP9 147 aa5.11□□□□□ -1.59
COL6A4P1-203ENST00000491915 TTTY13Q9BZ97 58 aa5.11□□□□□ -1.59
COL6A4P1-203ENST00000491915 NDUFC2O95298 119 aa5.1□□□□□ -1.59
COL6A4P1-203ENST00000491915 COA6Q5JTJ3 125 aaKnown RBP5.1□□□□□ -1.59
COL6A4P1-203ENST00000491915 GAGE2AQ6NT46 116 aa5.1□□□□□ -1.59
COL6A4P1-203ENST00000491915 KRTAP3-3Q9BYR6 98 aa5.1□□□□□ -1.59
COL6A4P1-203ENST00000491915 KRTAP3-2Q9BYR7 98 aa5.1□□□□□ -1.59
COL6A4P1-203ENST00000491915 LINC00483Q53H64 154 aa5.09□□□□□ -1.59
COL6A4P1-203ENST00000491915 SPANXB1Q9NS25 103 aaPredicted RBP5.09□□□□□ -1.59
COL6A4P1-203ENST00000491915 IGLV7-46A0A075B6I9 117 aa5.08□□□□□ -1.6
COL6A4P1-203ENST00000491915 Q8NBF4 154 aa5.08□□□□□ -1.6
COL6A4P1-203ENST00000491915 LINC00308Q8TCZ7 52 aa5.08□□□□□ -1.6
COL6A4P1-203ENST00000491915 ZNF706Q9Y5V0 76 aaPredicted RBP5.08□□□□□ -1.6
COL6A4P1-203ENST00000491915 A0A1B0GV90 55 aa5.07□□□□□ -1.6
COL6A4P1-203ENST00000491915 KRTDAPP60985 99 aa5.07□□□□□ -1.6
COL6A4P1-203ENST00000491915 S100A7L2Q5SY68 101 aa5.07□□□□□ -1.6
COL6A4P1-203ENST00000491915 SPAG11AQ6PDA7 123 aa5.07□□□□□ -1.6
COL6A4P1-203ENST00000491915 Q6ZRX8 168 aa5.07□□□□□ -1.6
COL6A4P1-203ENST00000491915 MIEN1Q9BRT3 115 aa5.07□□□□□ -1.6
COL6A4P1-203ENST00000491915 ZNF815PA8K554 130 aa5.06□□□□□ -1.6
COL6A4P1-203ENST00000491915 TIMM17BO60830 172 aa5.06□□□□□ -1.6
COL6A4P1-203ENST00000491915 ST20-AS1Q8NBB2 130 aa5.06□□□□□ -1.6
COL6A4P1-203ENST00000491915 TRAV23DV6A0A075B6W5 121 aa5.05□□□□□ -1.6
COL6A4P1-203ENST00000491915 ZNF73O43830 326 aaPredicted RBP5.05□□□□□ -1.6
COL6A4P1-203ENST00000491915 SMIM6P0DI80 62 aa5.05□□□□□ -1.6
COL6A4P1-203ENST00000491915 MTURNQ8N3F0 131 aa5.05□□□□□ -1.6
COL6A4P1-203ENST00000491915 IGLV9-49A0A0B4J1Y8 123 aa5.04□□□□□ -1.6
COL6A4P1-203ENST00000491915 MOBPQ13875 183 aa5.04□□□□□ -1.6
COL6A4P1-203ENST00000491915 SSBP3-AS1Q7Z2R9 100 aa5.04□□□□□ -1.6
COL6A4P1-203ENST00000491915 ATOH7Q8N100 152 aa5.04□□□□□ -1.6
COL6A4P1-203ENST00000491915 OR13C6PQ8NH95 151 aa5.04□□□□□ -1.6
COL6A4P1-203ENST00000491915 MUC17Q685J3 4493 aa5.03□□□□□ -1.6
COL6A4P1-203ENST00000491915 SCGB1A1P11684 91 aa5.03□□□□□ -1.6
COL6A4P1-203ENST00000491915 TPRXLQ17RH7 258 aa5.03□□□□□ -1.6
COL6A4P1-203ENST00000491915 SPANXCQ9NY87 97 aa5.03□□□□□ -1.6
COL6A4P1-203ENST00000491915 PCP2Q8IVA1 136 aa5.02□□□□□ -1.61
COL6A4P1-203ENST00000491915 TSTD3H0UI37 97 aa5.01□□□□□ -1.61
COL6A4P1-203ENST00000491915 SPINK1P00995 79 aa5.01□□□□□ -1.61
COL6A4P1-203ENST00000491915 JOSD1Q15040 202 aaPredicted RBP5.01□□□□□ -1.61
COL6A4P1-203ENST00000491915 KRTAP13-3Q3SY46 172 aa5□□□□□ -1.61
COL6A4P1-203ENST00000491915 MUSTN1Q8IVN3 82 aa5□□□□□ -1.61
COL6A4P1-203ENST00000491915 Q8N377 158 aa5□□□□□ -1.61
COL6A4P1-203ENST00000491915 SPANXDQ9BXN6 97 aa5□□□□□ -1.61
COL6A4P1-203ENST00000491915 V9GYY9 64 aa5□□□□□ -1.61
COL6A4P1-203ENST00000491915 SPRR1BP22528 89 aa4.99□□□□□ -1.61
COL6A4P1-203ENST00000491915 HINT1P49773 126 aaPredicted RBP4.99□□□□□ -1.61
COL6A4P1-203ENST00000491915 C6orf99Q4VX62 202 aa4.99□□□□□ -1.61
COL6A4P1-203ENST00000491915 SCGB1D4Q6XE38 83 aa4.99□□□□□ -1.61
COL6A4P1-203ENST00000491915 FP248Q71RG6 208 aaPredicted RBP4.99□□□□□ -1.61
COL6A4P1-203ENST00000491915 HIST3H2BBQ8N257 126 aa4.99□□□□□ -1.61
COL6A4P1-203ENST00000491915 MUC2Q02817 5179 aa4.99□□□□□ -1.61
COL6A4P1-203ENST00000491915 C20orf202A1L168 122 aa4.98□□□□□ -1.61
COL6A4P1-203ENST00000491915 COX7BP24311 80 aa4.98□□□□□ -1.61
COL6A4P1-203ENST00000491915 HIST1H2BLQ99880 126 aa4.98□□□□□ -1.61
COL6A4P1-203ENST00000491915 IFITM1P13164 125 aa4.97□□□□□ -1.61
COL6A4P1-203ENST00000491915 ELOF1P60002 83 aaKnown RBP4.97□□□□□ -1.61
COL6A4P1-203ENST00000491915 C9orf153Q5TBE3 101 aa4.97□□□□□ -1.61
COL6A4P1-203ENST00000491915 DHRS4-AS1Q9P1J3 65 aa4.97□□□□□ -1.61
COL6A4P1-203ENST00000491915 DLEU1O43261 78 aa4.96□□□□□ -1.62
COL6A4P1-203ENST00000491915 RPS29P62273 56 aaKnown RBP4.96□□□□□ -1.62
COL6A4P1-203ENST00000491915 DEFB105AQ8NG35 78 aa4.96□□□□□ -1.62
COL6A4P1-203ENST00000491915 A6NDN8 102 aa4.95□□□□□ -1.62
COL6A4P1-203ENST00000491915 SLC25A20O43772 301 aa4.95□□□□□ -1.62
COL6A4P1-203ENST00000491915 AKR1D1P51857 326 aa4.95□□□□□ -1.62
COL6A4P1-203ENST00000491915 LINC01547P58512 204 aaPredicted RBP4.95□□□□□ -1.62
COL6A4P1-203ENST00000491915 TAL2Q16559 108 aa4.95□□□□□ -1.62
COL6A4P1-203ENST00000491915 HRCT1Q6UXD1 115 aa4.95□□□□□ -1.62
COL6A4P1-203ENST00000491915 Q6ZVH6 145 aa4.95□□□□□ -1.62
COL6A4P1-203ENST00000491915 SMIM29Q86T20 159 aa4.95□□□□□ -1.62
COL6A4P1-203ENST00000491915 KRTAP4-1Q9BYQ7 146 aa4.95□□□□□ -1.62
COL6A4P1-203ENST00000491915 A0A0G2JQZ4 141 aa4.94□□□□□ -1.62
COL6A4P1-203ENST00000491915 TRBV7-6A0A0J9YX20 115 aa4.94□□□□□ -1.62
COL6A4P1-203ENST00000491915 LCE2AQ5TA79 106 aaPredicted RBP4.94□□□□□ -1.62
COL6A4P1-203ENST00000491915 SMIM11BQ8TCY0 68 aa4.94□□□□□ -1.62
COL6A4P1-203ENST00000491915 LAMTOR3Q9UHA4 124 aa4.94□□□□□ -1.62
COL6A4P1-203ENST00000491915 S100A2P29034 98 aa4.93□□□□□ -1.62
COL6A4P1-203ENST00000491915 SNRPEP62304 92 aaKnown RBP4.93□□□□□ -1.62
COL6A4P1-203ENST00000491915 Q1RN00 199 aa4.93□□□□□ -1.62
COL6A4P1-203ENST00000491915 ASB16-AS1Q495Z4 193 aa4.93□□□□□ -1.62
COL6A4P1-203ENST00000491915 FAT4Q6V0I7 4981 aa4.93□□□□□ -1.62
COL6A4P1-203ENST00000491915 TEX49A0A1B0GTD5 131 aa4.92□□□□□ -1.62
COL6A4P1-203ENST00000491915 A0A1B0GWB2 263 aa4.92□□□□□ -1.62
COL6A4P1-203ENST00000491915 VPS25Q9BRG1 176 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms