RNA–Protein interactions for RNA: ENST00000490733.1

EPCAM-206, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-206ENST00000490733 IGKV2-28A0A075B6P5 120 aa3.08□□□□□ -1.92
EPCAM-206ENST00000490733 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.08□□□□□ -1.92
EPCAM-206ENST00000490733 LOC107984640A0A0U1RRK4 108 aa3.08□□□□□ -1.92
EPCAM-206ENST00000490733 FAM168BA1KXE4 195 aa3.08□□□□□ -1.92
EPCAM-206ENST00000490733 IGKV2D-28P01615 120 aa3.08□□□□□ -1.92
EPCAM-206ENST00000490733 CHTF8P0CG12 524 aa3.08□□□□□ -1.92
EPCAM-206ENST00000490733 IFITM1P13164 125 aa3.08□□□□□ -1.92
EPCAM-206ENST00000490733 SEC61BP60468 96 aaKnown RBP3.08□□□□□ -1.92
EPCAM-206ENST00000490733 PRR3P79522 188 aaKnown RBP3.08□□□□□ -1.92
EPCAM-206ENST00000490733 RPL18AQ02543 176 aaKnown RBP3.08□□□□□ -1.92
EPCAM-206ENST00000490733 PPDPFQ9H3Y8 114 aa3.08□□□□□ -1.92
EPCAM-206ENST00000490733 HSPG2P98160 4391 aa3.07□□□□□ -1.92
EPCAM-206ENST00000490733 IGLV5-52A0A0A0MRZ9 124 aa3.07□□□□□ -1.92
EPCAM-206ENST00000490733 A0A1B0GWB2 263 aa3.07□□□□□ -1.92
EPCAM-206ENST00000490733 A0A1W2PNN7 141 aa3.07□□□□□ -1.92
EPCAM-206ENST00000490733 C16orf90A8MZG2 172 aa3.07□□□□□ -1.92
EPCAM-206ENST00000490733 K7ERJ3 54 aa3.07□□□□□ -1.92
EPCAM-206ENST00000490733 CFC1BP0CG36 223 aa3.07□□□□□ -1.92
EPCAM-206ENST00000490733 CFC1P0CG37 223 aa3.07□□□□□ -1.92
EPCAM-206ENST00000490733 LINC00336Q6ZUF6 198 aa3.07□□□□□ -1.92
EPCAM-206ENST00000490733 PRR26Q8N8Z3 221 aa3.07□□□□□ -1.92
EPCAM-206ENST00000490733 FAT1Q14517 4588 aa3.07□□□□□ -1.92
EPCAM-206ENST00000490733 IGKV2-24A0A0C4DH68 120 aa3.06□□□□□ -1.92
EPCAM-206ENST00000490733 M0R143 59 aa3.06□□□□□ -1.92
EPCAM-206ENST00000490733 NDUFC2O95298 119 aa3.06□□□□□ -1.92
EPCAM-206ENST00000490733 KRTAP10-1P60331 282 aa3.06□□□□□ -1.92
EPCAM-206ENST00000490733 RPL24P83731 157 aaKnown RBP3.06□□□□□ -1.92
EPCAM-206ENST00000490733 BATFQ16520 125 aa3.06□□□□□ -1.92
EPCAM-206ENST00000490733 LINC00337Q8N6G1 96 aa3.06□□□□□ -1.92
EPCAM-206ENST00000490733 SPACA4Q8TDM5 124 aa3.06□□□□□ -1.92
EPCAM-206ENST00000490733 NHP2Q9NX24 153 aaKnown RBP3.06□□□□□ -1.92
EPCAM-206ENST00000490733 IGLV5-37A0A075B6J1 123 aa3.05□□□□□ -1.92
EPCAM-206ENST00000490733 A0A0B4J2C4 111 aa3.05□□□□□ -1.92
EPCAM-206ENST00000490733 EPM2AB3EWF7 344 aa3.05□□□□□ -1.92
EPCAM-206ENST00000490733 NCR3O14931 201 aa3.05□□□□□ -1.92
EPCAM-206ENST00000490733 Q6ZSA8 131 aa3.05□□□□□ -1.92
EPCAM-206ENST00000490733 KRTAP11-1Q8IUC1 163 aa3.05□□□□□ -1.92
EPCAM-206ENST00000490733 A0A087WYN8 130 aa3.04□□□□□ -1.92
EPCAM-206ENST00000490733 TAX1BP3O14907 124 aa3.04□□□□□ -1.92
EPCAM-206ENST00000490733 TSPAN13O95857 204 aa3.04□□□□□ -1.92
EPCAM-206ENST00000490733 IGLV6-57P01721 117 aa3.04□□□□□ -1.92
EPCAM-206ENST00000490733 FAM19A5Q7Z5A7 132 aaPredicted RBP3.04□□□□□ -1.92
EPCAM-206ENST00000490733 C7orf33Q8WU49 177 aa3.04□□□□□ -1.92
EPCAM-206ENST00000490733 COPS9Q8WXC6 57 aa3.04□□□□□ -1.92
EPCAM-206ENST00000490733 C22orf24Q9Y442 160 aa3.04□□□□□ -1.92
EPCAM-206ENST00000490733 RYR1P21817 5038 aa3.04□□□□□ -1.92
EPCAM-206ENST00000490733 TRBV10-3A0A0K0K1G6 114 aa3.03□□□□□ -1.92
EPCAM-206ENST00000490733 TRBV10-2A0A0K0K1G8 114 aa3.03□□□□□ -1.92
EPCAM-206ENST00000490733 A6NDN8 102 aa3.03□□□□□ -1.92
EPCAM-206ENST00000490733 M0R378 163 aa3.03□□□□□ -1.92
EPCAM-206ENST00000490733 RPL13AP40429 203 aaKnown RBP3.03□□□□□ -1.92
EPCAM-206ENST00000490733 HAMPP81172 84 aa3.03□□□□□ -1.92
EPCAM-206ENST00000490733 PHF5AQ7RTV0 110 aaKnown RBP3.03□□□□□ -1.92
EPCAM-206ENST00000490733 RAB37Q96AX2 223 aa3.03□□□□□ -1.92
EPCAM-206ENST00000490733 LINC00167Q96N53 147 aa3.03□□□□□ -1.92
EPCAM-206ENST00000490733 NAA38Q9BRA0 125 aaKnown RBP3.03□□□□□ -1.92
EPCAM-206ENST00000490733 PLAC8Q9NZF1 115 aa3.03□□□□□ -1.92
EPCAM-206ENST00000490733 PRO1854Q9UHT4 67 aa3.03□□□□□ -1.92
EPCAM-206ENST00000490733 PKHD1L1Q86WI1 4243 aa3.03□□□□□ -1.92
EPCAM-206ENST00000490733 SRRM2Q9UQ35 2752 aaKnown RBP3.03□□□□□ -1.92
EPCAM-206ENST00000490733 IGLV1-50A0A075B6I6 118 aa3.02□□□□□ -1.93
EPCAM-206ENST00000490733 TRAV13-2A0A0B4J235 113 aa3.02□□□□□ -1.93
EPCAM-206ENST00000490733 RPL37AP8A6NKH3 93 aa3.02□□□□□ -1.93
EPCAM-206ENST00000490733 H7C2G1 150 aa3.02□□□□□ -1.93
EPCAM-206ENST00000490733 M0QXV9 152 aa3.02□□□□□ -1.93
EPCAM-206ENST00000490733 COL5A1-AS1Q5SY13 56 aa3.02□□□□□ -1.93
EPCAM-206ENST00000490733 SCXQ7RTU7 201 aa3.02□□□□□ -1.93
EPCAM-206ENST00000490733 MRPL55Q7Z7F7 128 aaKnown RBP3.02□□□□□ -1.93
EPCAM-206ENST00000490733 CIRBP-AS1Q8TBR5 109 aa3.02□□□□□ -1.93
EPCAM-206ENST00000490733 SMIM11BQ8TCY0 68 aa3.02□□□□□ -1.93
EPCAM-206ENST00000490733 LINC00474Q9P2X8 69 aa3.02□□□□□ -1.93
EPCAM-206ENST00000490733 PKIGQ9Y2B9 76 aa3.02□□□□□ -1.93
EPCAM-206ENST00000490733 KIAA1109Q2LD37 5005 aa3.01□□□□□ -1.93
EPCAM-206ENST00000490733 KRTAP4-16G5E9R7 235 aaPredicted RBP3.01□□□□□ -1.93
EPCAM-206ENST00000490733 RPL28P46779 137 aaKnown RBP3.01□□□□□ -1.93
EPCAM-206ENST00000490733 XGP55808 180 aa3.01□□□□□ -1.93
EPCAM-206ENST00000490733 C5orf47Q569G3 176 aa3.01□□□□□ -1.93
EPCAM-206ENST00000490733 NKAPP1Q8N9T2 125 aa3.01□□□□□ -1.93
EPCAM-206ENST00000490733 OR13C6PQ8NH95 151 aa3.01□□□□□ -1.93
EPCAM-206ENST00000490733 TMEM126AQ9H061 195 aa3.01□□□□□ -1.93
EPCAM-206ENST00000490733 KCNQ1DNQ9H478 68 aa3.01□□□□□ -1.93
EPCAM-206ENST00000490733 OBSCNQ5VST9 7968 aa3.01□□□□□ -1.93
EPCAM-206ENST00000490733 TRAV23DV6A0A075B6W5 121 aa3□□□□□ -1.93
EPCAM-206ENST00000490733 H3BUT2 72 aa3□□□□□ -1.93
EPCAM-206ENST00000490733 SPRR1AP35321 89 aa3□□□□□ -1.93
EPCAM-206ENST00000490733 S100A7L2Q5SY68 101 aa3□□□□□ -1.93
EPCAM-206ENST00000490733 DPH3Q96FX2 82 aa3□□□□□ -1.93
EPCAM-206ENST00000490733 A0A1W2PPM0 123 aa2.99□□□□□ -1.93
EPCAM-206ENST00000490733 ZNF73O43830 326 aaPredicted RBP2.99□□□□□ -1.93
EPCAM-206ENST00000490733 C6orf99Q4VX62 202 aa2.99□□□□□ -1.93
EPCAM-206ENST00000490733 FAM218AQ96MZ4 157 aa2.99□□□□□ -1.93
EPCAM-206ENST00000490733 A0A1B0GV90 55 aa2.98□□□□□ -1.93
EPCAM-206ENST00000490733 UBE2BP63146 152 aa2.98□□□□□ -1.93
EPCAM-206ENST00000490733 Q1RN00 199 aa2.98□□□□□ -1.93
EPCAM-206ENST00000490733 REG3GQ6UW15 175 aa2.98□□□□□ -1.93
EPCAM-206ENST00000490733 KRTAP13-1Q8IUC0 172 aa2.98□□□□□ -1.93
EPCAM-206ENST00000490733 CLEC2BQ92478 149 aa2.98□□□□□ -1.93
EPCAM-206ENST00000490733 PSORS1C2Q9UIG4 136 aa2.98□□□□□ -1.93
EPCAM-206ENST00000490733 BIRC6Q9NR09 4857 aa2.98□□□□□ -1.93
EPCAM-206ENST00000490733 TCL1BO95988 128 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms