RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 SPTBN2O15020 2390 aa1.21□□□□□ -2.22
HMGB1P38-201ENST00000490557 C2CD3Q4AC94 2353 aa1.2□□□□□ -2.22
HMGB1P38-201ENST00000490557 K7EMI3 77 aa1.2□□□□□ -2.22
HMGB1P38-201ENST00000490557 Q5VSD8 79 aa1.2□□□□□ -2.22
HMGB1P38-201ENST00000490557 NCBP2-AS2Q69YL0 99 aa1.2□□□□□ -2.22
HMGB1P38-201ENST00000490557 SYCP2Q9BX26 1530 aa1.2□□□□□ -2.22
HMGB1P38-201ENST00000490557 CNOT1A5YKK6 2376 aaKnown RBP1.19□□□□□ -2.22
HMGB1P38-201ENST00000490557 CACNA1HO95180 2353 aa1.19□□□□□ -2.22
HMGB1P38-201ENST00000490557 TSC2P49815 1807 aa1.19□□□□□ -2.22
HMGB1P38-201ENST00000490557 ASH1LQ9NR48 2969 aaKnown RBP1.19□□□□□ -2.22
HMGB1P38-201ENST00000490557 UGGT1Q9NYU2 1555 aa1.18□□□□□ -2.22
HMGB1P38-201ENST00000490557 M0R1W7 72 aa1.18□□□□□ -2.22
HMGB1P38-201ENST00000490557 SPRR1AP35321 89 aa1.18□□□□□ -2.22
HMGB1P38-201ENST00000490557 CDKN2A-AS1Q9UH64 79 aa1.18□□□□□ -2.22
HMGB1P38-201ENST00000490557 APLNQ9ULZ1 77 aa1.18□□□□□ -2.22
HMGB1P38-201ENST00000490557 PTPRZ1P23471 2315 aaPredicted RBP1.18□□□□□ -2.22
HMGB1P38-201ENST00000490557 PTPRQQ9UMZ3 2332 aa1.18□□□□□ -2.22
HMGB1P38-201ENST00000490557 ZNF462Q96JM2 2506 aa1.18□□□□□ -2.22
HMGB1P38-201ENST00000490557 FANCD2Q9BXW9 1451 aa1.18□□□□□ -2.22
HMGB1P38-201ENST00000490557 USF3Q68DE3 2245 aa1.17□□□□□ -2.22
HMGB1P38-201ENST00000490557 NDUFA3O95167 84 aa1.17□□□□□ -2.22
HMGB1P38-201ENST00000490557 CLASP1Q7Z460 1538 aa1.16□□□□□ -2.22
HMGB1P38-201ENST00000490557 SPRR1BP22528 89 aa1.16□□□□□ -2.22
HMGB1P38-201ENST00000490557 PRB3Q04118 309 aaPredicted RBP1.16□□□□□ -2.22
HMGB1P38-201ENST00000490557 DEFB105AQ8NG35 78 aa1.16□□□□□ -2.22
HMGB1P38-201ENST00000490557 CRIP1P50238 77 aa1.15□□□□□ -2.23
HMGB1P38-201ENST00000490557 PRO3102Q9H379 93 aa1.15□□□□□ -2.23
HMGB1P38-201ENST00000490557 MROH2AA6NES4 1674 aa1.15□□□□□ -2.23
HMGB1P38-201ENST00000490557 KIF1AQ12756 1690 aa1.15□□□□□ -2.23
HMGB1P38-201ENST00000490557 TNRC6CQ9HCJ0 1690 aaKnown RBP1.15□□□□□ -2.23
HMGB1P38-201ENST00000490557 ITSN2Q9NZM3 1697 aa1.14□□□□□ -2.23
HMGB1P38-201ENST00000490557 DDX60LQ5H9U9 1706 aaKnown RBP1.14□□□□□ -2.23
HMGB1P38-201ENST00000490557 BIVM-ERCC5R4GMW8 1640 aa1.14□□□□□ -2.23
HMGB1P38-201ENST00000490557 SPTBN1Q01082 2364 aaKnown RBP1.13□□□□□ -2.23
HMGB1P38-201ENST00000490557 PRH1P02810 166 aa1.13□□□□□ -2.23
HMGB1P38-201ENST00000490557 LINC00158P58513 81 aa1.13□□□□□ -2.23
HMGB1P38-201ENST00000490557 H1FX-AS1Q4G0G2 97 aa1.13□□□□□ -2.23
HMGB1P38-201ENST00000490557 CROCC2H7BZ55 1655 aa1.13□□□□□ -2.23
HMGB1P38-201ENST00000490557 LY75O60449 1722 aa1.12□□□□□ -2.23
HMGB1P38-201ENST00000490557 TTC28Q96AY4 2481 aa1.12□□□□□ -2.23
HMGB1P38-201ENST00000490557 IGIPA6NJ69 53 aa1.12□□□□□ -2.23
HMGB1P38-201ENST00000490557 CMC2Q9NRP2 79 aa1.12□□□□□ -2.23
HMGB1P38-201ENST00000490557 ADCY10Q96PN6 1610 aa1.11□□□□□ -2.23
HMGB1P38-201ENST00000490557 C3P01024 1663 aa1.11□□□□□ -2.23
HMGB1P38-201ENST00000490557 F8P00451 2351 aa1.11□□□□□ -2.23
HMGB1P38-201ENST00000490557 PLNP26678 52 aa1.11□□□□□ -2.23
HMGB1P38-201ENST00000490557 LELP1Q5T871 98 aa1.11□□□□□ -2.23
HMGB1P38-201ENST00000490557 EFCAB6Q5THR3 1501 aa1.1□□□□□ -2.23
HMGB1P38-201ENST00000490557 TJP1Q07157 1748 aa1.1□□□□□ -2.23
HMGB1P38-201ENST00000490557 SPINK4O60575 86 aa1.1□□□□□ -2.23
HMGB1P38-201ENST00000490557 WFDC13Q8IUB5 93 aa1.1□□□□□ -2.23
HMGB1P38-201ENST00000490557 PIEZO2Q9H5I5 2752 aa1.1□□□□□ -2.23
HMGB1P38-201ENST00000490557 KLK9Q2XQG4 91 aa1.09□□□□□ -2.23
HMGB1P38-201ENST00000490557 H0YAA0 97 aa1.07□□□□□ -2.24
HMGB1P38-201ENST00000490557 H0YGX0 51 aa1.07□□□□□ -2.24
HMGB1P38-201ENST00000490557 LYNX1G3V0Z9 82 aa1.06□□□□□ -2.24
HMGB1P38-201ENST00000490557 TOMM5Q8N4H5 51 aa1.06□□□□□ -2.24
HMGB1P38-201ENST00000490557 WNK2Q9Y3S1 2297 aa1.06□□□□□ -2.24
HMGB1P38-201ENST00000490557 MINOS1Q5TGZ0 78 aa1.05□□□□□ -2.24
HMGB1P38-201ENST00000490557 ABCC8Q09428 1581 aa1.04□□□□□ -2.24
HMGB1P38-201ENST00000490557 PKDREJQ9NTG1 2253 aa1.04□□□□□ -2.24
HMGB1P38-201ENST00000490557 DEFB109BQ30KR1 87 aa1.04□□□□□ -2.24
HMGB1P38-201ENST00000490557 TMEM167BQ9NRX6 74 aa1.04□□□□□ -2.24
HMGB1P38-201ENST00000490557 ABRACLQ9P1F3 81 aa1.04□□□□□ -2.24
HMGB1P38-201ENST00000490557 AGLP35573 1532 aa1.04□□□□□ -2.24
HMGB1P38-201ENST00000490557 DEPDC5O75140 1603 aa1.04□□□□□ -2.24
HMGB1P38-201ENST00000490557 LOC730098B7Z3J9 87 aa1.03□□□□□ -2.24
HMGB1P38-201ENST00000490557 IAPPP10997 89 aa1.03□□□□□ -2.24
HMGB1P38-201ENST00000490557 ABCA12Q86UK0 2595 aa1.03□□□□□ -2.24
HMGB1P38-201ENST00000490557 KIAA0586Q9BVV6 1533 aa1.03□□□□□ -2.24
HMGB1P38-201ENST00000490557 HMCN1Q96RW7 5635 aa1.03□□□□□ -2.25
HMGB1P38-201ENST00000490557 GVINP1Q7Z2Y8 2422 aa1.03□□□□□ -2.25
HMGB1P38-201ENST00000490557 POLQO75417 2590 aa1.02□□□□□ -2.25
HMGB1P38-201ENST00000490557 AKAP6Q13023 2319 aa1.02□□□□□ -2.25
HMGB1P38-201ENST00000490557 SPINK6Q6UWN8 80 aa1.02□□□□□ -2.25
HMGB1P38-201ENST00000490557 SMIM27A0A1W2PRY6 76 aa1.01□□□□□ -2.25
HMGB1P38-201ENST00000490557 C6orf48Q9UBA6 75 aa1.01□□□□□ -2.25
HMGB1P38-201ENST00000490557 A0A1B0GUL6 1792 aa1.01□□□□□ -2.25
HMGB1P38-201ENST00000490557 ANKRD36CQ5JPF3 1778 aa1.01□□□□□ -2.25
HMGB1P38-201ENST00000490557 C4AP0C0L4 1744 aa1.01□□□□□ -2.25
HMGB1P38-201ENST00000490557 C4BP0C0L5 1744 aa1.01□□□□□ -2.25
HMGB1P38-201ENST00000490557 NOTCH1P46531 2555 aa1□□□□□ -2.25
HMGB1P38-201ENST00000490557 ABCA5Q8WWZ7 1642 aa1□□□□□ -2.25
HMGB1P38-201ENST00000490557 MEGF8Q7Z7M0 2845 aa0.99□□□□□ -2.25
HMGB1P38-201ENST00000490557 KNL1Q8NG31 2342 aa0.99□□□□□ -2.25
HMGB1P38-201ENST00000490557 BPTFQ12830 3046 aa0.99□□□□□ -2.25
HMGB1P38-201ENST00000490557 DEFB130BP0DP73 79 aa0.99□□□□□ -2.25
HMGB1P38-201ENST00000490557 DEFB130AP0DP74 79 aa0.99□□□□□ -2.25
HMGB1P38-201ENST00000490557 KRTAP5-10Q6L8G5 202 aa0.99□□□□□ -2.25
HMGB1P38-201ENST00000490557 LINC00308Q8TCZ7 52 aa0.99□□□□□ -2.25
HMGB1P38-201ENST00000490557 TIMM8BQ9Y5J9 83 aaPredicted RBP0.99□□□□□ -2.25
HMGB1P38-201ENST00000490557 ZNF292O60281 2723 aa0.98□□□□□ -2.25
HMGB1P38-201ENST00000490557 NRXN3Q9Y4C0 1643 aa0.97□□□□□ -2.25
HMGB1P38-201ENST00000490557 BDP1A6H8Y1 2624 aa0.97□□□□□ -2.25
HMGB1P38-201ENST00000490557 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
HMGB1P38-201ENST00000490557 TPRP12270 2363 aaKnown RBP0.96□□□□□ -2.26
HMGB1P38-201ENST00000490557 LINC01546A6NGU7 62 aa0.96□□□□□ -2.26
HMGB1P38-201ENST00000490557 IQGAP2Q13576 1575 aa0.96□□□□□ -2.26
HMGB1P38-201ENST00000490557 SPINK1P00995 79 aa0.95□□□□□ -2.26
HMGB1P38-201ENST00000490557 PIEZO1Q92508 2521 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms