RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 SPINT4Q6UDR6 99 aa5.86□□□□□ -1.47
LSAMP-205ENST00000490035 BPTFQ12830 3046 aa5.86□□□□□ -1.47
LSAMP-205ENST00000490035 SRCAPQ6ZRS2 3230 aa5.86□□□□□ -1.47
LSAMP-205ENST00000490035 LINC00304Q8N9R0 145 aa5.86□□□□□ -1.47
LSAMP-205ENST00000490035 MIR22HGQ0VDD5 57 aa5.85□□□□□ -1.47
LSAMP-205ENST00000490035 CNBPP62633 177 aaKnown RBP5.85□□□□□ -1.47
LSAMP-205ENST00000490035 LINC00336Q6ZUF6 198 aa5.85□□□□□ -1.47
LSAMP-205ENST00000490035 POLQO75417 2590 aa5.85□□□□□ -1.47
LSAMP-205ENST00000490035 CHTF8P0CG12 524 aa5.85□□□□□ -1.47
LSAMP-205ENST00000490035 Q8N377 158 aa5.85□□□□□ -1.47
LSAMP-205ENST00000490035 C9orf163Q8N9P6 203 aa5.84□□□□□ -1.47
LSAMP-205ENST00000490035 IGLV5-37A0A075B6J1 123 aa5.84□□□□□ -1.47
LSAMP-205ENST00000490035 C15orf56Q8N910 161 aa5.84□□□□□ -1.47
LSAMP-205ENST00000490035 CD164Q04900 197 aa5.83□□□□□ -1.48
LSAMP-205ENST00000490035 PRRC2CQ9Y520 2896 aaKnown RBP5.83□□□□□ -1.48
LSAMP-205ENST00000490035 A8MUN3 132 aa5.82□□□□□ -1.48
LSAMP-205ENST00000490035 USP24Q9UPU5 2620 aa5.82□□□□□ -1.48
LSAMP-205ENST00000490035 RBM12B-AS1Q9P1G2 102 aa5.82□□□□□ -1.48
LSAMP-205ENST00000490035 H7BZZ5 65 aa5.81□□□□□ -1.48
LSAMP-205ENST00000490035 FAM168BA1KXE4 195 aa5.8□□□□□ -1.48
LSAMP-205ENST00000490035 KTN1-AS1Q86SY8 53 aa5.8□□□□□ -1.48
LSAMP-205ENST00000490035 IGLV5-48A0A075B6I7 105 aa5.8□□□□□ -1.48
LSAMP-205ENST00000490035 C9orf129Q5T035 196 aaKnown RBP5.79□□□□□ -1.48
LSAMP-205ENST00000490035 A0A087WTM6 91 aa5.79□□□□□ -1.48
LSAMP-205ENST00000490035 FAM104AQ969W3 186 aa5.78□□□□□ -1.48
LSAMP-205ENST00000490035 OBSCN-AS1Q96MR7 158 aa5.78□□□□□ -1.48
LSAMP-205ENST00000490035 IGLV7-43P04211 117 aa5.78□□□□□ -1.48
LSAMP-205ENST00000490035 FLG2Q5D862 2391 aaPredicted RBP5.77□□□□□ -1.49
LSAMP-205ENST00000490035 J3QL48 77 aa5.77□□□□□ -1.49
LSAMP-205ENST00000490035 A0A096LNT2 108 aa5.77□□□□□ -1.49
LSAMP-205ENST00000490035 IGLV8-61A0A075B6I0 122 aa5.76□□□□□ -1.49
LSAMP-205ENST00000490035 LCA10Q71F78 164 aa5.76□□□□□ -1.49
LSAMP-205ENST00000490035 SPRR4Q96PI1 79 aa5.76□□□□□ -1.49
LSAMP-205ENST00000490035 CDC42SE1Q9NRR8 79 aa5.76□□□□□ -1.49
LSAMP-205ENST00000490035 GIG44P09565 113 aaPredicted RBP5.75□□□□□ -1.49
LSAMP-205ENST00000490035 Q1T7F1 81 aa5.75□□□□□ -1.49
LSAMP-205ENST00000490035 K7EIL1 84 aa5.75□□□□□ -1.49
LSAMP-205ENST00000490035 ZNF575Q86XF7 245 aa5.75□□□□□ -1.49
LSAMP-205ENST00000490035 DSCR10P59022 87 aa5.74□□□□□ -1.49
LSAMP-205ENST00000490035 COX6B2Q6YFQ2 88 aa5.73□□□□□ -1.49
LSAMP-205ENST00000490035 KRTAP10-11P60412 298 aa5.72□□□□□ -1.49
LSAMP-205ENST00000490035 FAM229BQ4G0N7 80 aa5.71□□□□□ -1.5
LSAMP-205ENST00000490035 PSORS1C2Q9UIG4 136 aa5.71□□□□□ -1.5
LSAMP-205ENST00000490035 APLNQ9ULZ1 77 aa5.7□□□□□ -1.5
LSAMP-205ENST00000490035 LUZP6Q538Z0 58 aa5.69□□□□□ -1.5
LSAMP-205ENST00000490035 OCR1Q9BZK8 76 aa5.69□□□□□ -1.5
LSAMP-205ENST00000490035 IGLV7-46A0A075B6I9 117 aa5.67□□□□□ -1.5
LSAMP-205ENST00000490035 EIF4EBP3O60516 100 aaPredicted RBP5.67□□□□□ -1.5
LSAMP-205ENST00000490035 A0A1W2PNM2 257 aa5.67□□□□□ -1.5
LSAMP-205ENST00000490035 WIPF1O43516 503 aa5.67□□□□□ -1.5
LSAMP-205ENST00000490035 KMT2BQ9UMN6 2715 aaPredicted RBP5.66□□□□□ -1.5
LSAMP-205ENST00000490035 FLNAP21333 2647 aaKnown RBP5.66□□□□□ -1.5
LSAMP-205ENST00000490035 A0A1W2PNN7 141 aa5.65□□□□□ -1.51
LSAMP-205ENST00000490035 Q75L30 129 aa5.64□□□□□ -1.51
LSAMP-205ENST00000490035 DNAH12Q6ZR08 3092 aa5.64□□□□□ -1.51
LSAMP-205ENST00000490035 ITPR3Q14573 2671 aa5.63□□□□□ -1.51
LSAMP-205ENST00000490035 EPG5Q9HCE0 2579 aa5.61□□□□□ -1.51
LSAMP-205ENST00000490035 C9orf92A6NGG3 77 aa5.61□□□□□ -1.51
LSAMP-205ENST00000490035 KRTAP10-3P60369 221 aa5.6□□□□□ -1.51
LSAMP-205ENST00000490035 LINC00483Q53H64 154 aa5.6□□□□□ -1.51
LSAMP-205ENST00000490035 TNP2Q05952 138 aa5.59□□□□□ -1.51
LSAMP-205ENST00000490035 DMAC1Q96GE9 116 aa5.59□□□□□ -1.51
LSAMP-205ENST00000490035 HRES1P13985 223 aa5.58□□□□□ -1.52
LSAMP-205ENST00000490035 KRTAP1-3Q8IUG1 177 aa5.58□□□□□ -1.52
LSAMP-205ENST00000490035 MGAM2Q2M2H8 2515 aa5.58□□□□□ -1.52
LSAMP-205ENST00000490035 A0A1B0GU33 70 aa5.57□□□□□ -1.52
LSAMP-205ENST00000490035 SPRR1AP35321 89 aa5.57□□□□□ -1.52
LSAMP-205ENST00000490035 Q6ZSA8 131 aa5.57□□□□□ -1.52
LSAMP-205ENST00000490035 HELZ2Q9BYK8 2649 aaKnown RBP5.56□□□□□ -1.52
LSAMP-205ENST00000490035 CFAP46Q8IYW2 2715 aa5.56□□□□□ -1.52
LSAMP-205ENST00000490035 AKAP13Q12802 2813 aa5.56□□□□□ -1.52
LSAMP-205ENST00000490035 PLAC8Q9NZF1 115 aa5.56□□□□□ -1.52
LSAMP-205ENST00000490035 ATRQ13535 2644 aa5.56□□□□□ -1.52
LSAMP-205ENST00000490035 SPRR1BP22528 89 aa5.56□□□□□ -1.52
LSAMP-205ENST00000490035 LINC01558Q9Y6Z2 57 aa5.55□□□□□ -1.52
LSAMP-205ENST00000490035 GOLGB1Q14789 3259 aaKnown RBP5.55□□□□□ -1.52
LSAMP-205ENST00000490035 LINC01554Q52M75 96 aa5.53□□□□□ -1.52
LSAMP-205ENST00000490035 KRTAP1-1Q07627 177 aa5.52□□□□□ -1.53
LSAMP-205ENST00000490035 ASB16-AS1Q495Z4 193 aa5.52□□□□□ -1.53
LSAMP-205ENST00000490035 Q8N1X5 172 aa5.52□□□□□ -1.53
LSAMP-205ENST00000490035 ZCCHC13Q8WW36 166 aaKnown RBP5.52□□□□□ -1.53
LSAMP-205ENST00000490035 MAST4O15021 2626 aa5.51□□□□□ -1.53
LSAMP-205ENST00000490035 CSAG1Q6PB30 78 aa5.51□□□□□ -1.53
LSAMP-205ENST00000490035 ANAPC11Q9NYG5 84 aa5.5□□□□□ -1.53
LSAMP-205ENST00000490035 FLNBO75369 2602 aaKnown RBP5.5□□□□□ -1.53
LSAMP-205ENST00000490035 MMP24-AS1A0A0U1RRL7 71 aa5.49□□□□□ -1.53
LSAMP-205ENST00000490035 CAMK2N1Q7Z7J9 78 aa5.49□□□□□ -1.53
LSAMP-205ENST00000490035 CASC10Q5T4H9 136 aa5.48□□□□□ -1.53
LSAMP-205ENST00000490035 PRR26Q8N8Z3 221 aa5.48□□□□□ -1.53
LSAMP-205ENST00000490035 Q8N9P0 234 aaPredicted RBP5.48□□□□□ -1.53
LSAMP-205ENST00000490035 HECTD1Q9ULT8 2610 aa5.48□□□□□ -1.53
LSAMP-205ENST00000490035 A0A0D9SG42 100 aa5.48□□□□□ -1.53
LSAMP-205ENST00000490035 SMR3BP02814 79 aaPredicted RBP5.48□□□□□ -1.53
LSAMP-205ENST00000490035 A0A0G2JQZ4 141 aa5.48□□□□□ -1.53
LSAMP-205ENST00000490035 LINC00472Q9H8W2 130 aa5.48□□□□□ -1.53
LSAMP-205ENST00000490035 S4R3F8 94 aa5.47□□□□□ -1.53
LSAMP-205ENST00000490035 CENPEQ02224 2701 aa5.47□□□□□ -1.53
LSAMP-205ENST00000490035 NBEAL1Q6ZS30 2694 aa5.47□□□□□ -1.53
LSAMP-205ENST00000490035 SEC61BP60468 96 aaKnown RBP5.44□□□□□ -1.54
LSAMP-205ENST00000490035 STAB1Q9NY15 2570 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms