RNA–Protein interactions for RNA: ENST00000489850.5

NOM1-208, Transcript of nucleolar protein with MIF4G domain 1, humanhuman

TSL 1 (best)

Gene NOM1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOM1-208ENST00000489850 HIGD2AQ9BW72 106 aa12.24□□□□□ -0.45
NOM1-208ENST00000489850 KRTAP4-16G5E9R7 235 aaPredicted RBP12.23□□□□□ -0.45
NOM1-208ENST00000489850 LINC00518Q8N0U6 118 aa12.23□□□□□ -0.45
NOM1-208ENST00000489850 CRYGAP11844 174 aa12.22□□□□□ -0.45
NOM1-208ENST00000489850 TRAV23DV6A0A075B6W5 121 aa12.21□□□□□ -0.45
NOM1-208ENST00000489850 FAM229BQ4G0N7 80 aa12.21□□□□□ -0.45
NOM1-208ENST00000489850 ZNF706Q9Y5V0 76 aaPredicted RBP12.2□□□□□ -0.46
NOM1-208ENST00000489850 OR13C6PQ8NH95 151 aa12.18□□□□□ -0.46
NOM1-208ENST00000489850 KRTAP3-3Q9BYR6 98 aa12.18□□□□□ -0.46
NOM1-208ENST00000489850 KRTAP3-2Q9BYR7 98 aa12.18□□□□□ -0.46
NOM1-208ENST00000489850 B5MCH6 92 aa12.17□□□□□ -0.46
NOM1-208ENST00000489850 ZNF73O43830 326 aaPredicted RBP12.17□□□□□ -0.46
NOM1-208ENST00000489850 HINT1P49773 126 aaPredicted RBP12.16□□□□□ -0.46
NOM1-208ENST00000489850 JOSD1Q15040 202 aaPredicted RBP12.16□□□□□ -0.46
NOM1-208ENST00000489850 Q6ZRX8 168 aa12.16□□□□□ -0.46
NOM1-208ENST00000489850 A0A087X002 238 aa12.15□□□□□ -0.46
NOM1-208ENST00000489850 MUSTN1Q8IVN3 82 aa12.14□□□□□ -0.47
NOM1-208ENST00000489850 HMCN2Q8NDA2 5059 aa12.14□□□□□ -0.47
NOM1-208ENST00000489850 TYMSOSQ8TAI1 123 aa12.13□□□□□ -0.47
NOM1-208ENST00000489850 SMCR5Q8TEV8 140 aa12.13□□□□□ -0.47
NOM1-208ENST00000489850 SPRR4Q96PI1 79 aa12.13□□□□□ -0.47
NOM1-208ENST00000489850 ANAPC11Q9NYG5 84 aa12.13□□□□□ -0.47
NOM1-208ENST00000489850 COX8AP10176 69 aa12.11□□□□□ -0.47
NOM1-208ENST00000489850 DLEU1O43261 78 aa12.09□□□□□ -0.47
NOM1-208ENST00000489850 Q9BRP9 147 aa12.09□□□□□ -0.47
NOM1-208ENST00000489850 VAMP8Q9BV40 100 aa12.09□□□□□ -0.47
NOM1-208ENST00000489850 TRAV13-2A0A0B4J235 113 aa12.08□□□□□ -0.48
NOM1-208ENST00000489850 A6NDN8 102 aa12.07□□□□□ -0.48
NOM1-208ENST00000489850 KRTAP13-2Q52LG2 175 aa12.07□□□□□ -0.48
NOM1-208ENST00000489850 PAM16Q9Y3D7 125 aa12.07□□□□□ -0.48
NOM1-208ENST00000489850 SPATA45Q537H7 98 aa12.06□□□□□ -0.48
NOM1-208ENST00000489850 TMA7Q9Y2S6 64 aaKnown RBP12.06□□□□□ -0.48
NOM1-208ENST00000489850 DHRS4-AS1Q9P1J3 65 aa12.05□□□□□ -0.48
NOM1-208ENST00000489850 ERC2-IT1O76042 136 aa12.04□□□□□ -0.48
NOM1-208ENST00000489850 LINC00483Q53H64 154 aa12.04□□□□□ -0.48
NOM1-208ENST00000489850 TRBV7-6A0A0J9YX20 115 aa12.03□□□□□ -0.48
NOM1-208ENST00000489850 C6orf99Q4VX62 202 aa12.03□□□□□ -0.48
NOM1-208ENST00000489850 HIST1H4GQ99525 98 aa12.03□□□□□ -0.48
NOM1-208ENST00000489850 COX7BP24311 80 aa12.02□□□□□ -0.49
NOM1-208ENST00000489850 ELOF1P60002 83 aaKnown RBP12.02□□□□□ -0.49
NOM1-208ENST00000489850 GAGE2AQ6NT46 116 aa12.02□□□□□ -0.49
NOM1-208ENST00000489850 C14orf144Q96I85 54 aa12.02□□□□□ -0.49
NOM1-208ENST00000489850 A4D1N5 150 aa12□□□□□ -0.49
NOM1-208ENST00000489850 SLC25A34Q6PIV7 304 aa12□□□□□ -0.49
NOM1-208ENST00000489850 LINC00304Q8N9R0 145 aa12□□□□□ -0.49
NOM1-208ENST00000489850 HIGD1BQ9P298 99 aa12□□□□□ -0.49
NOM1-208ENST00000489850 A0A1B0GWB2 263 aa11.99□□□□□ -0.49
NOM1-208ENST00000489850 CTAG1AP78358 180 aa11.98□□□□□ -0.49
NOM1-208ENST00000489850 C3orf22Q8N5N4 141 aa11.98□□□□□ -0.49
NOM1-208ENST00000489850 PYY3Q5JQD4 70 aa11.97□□□□□ -0.49
NOM1-208ENST00000489850 TSPAN13O95857 204 aa11.95□□□□□ -0.5
NOM1-208ENST00000489850 SMIM11BQ8TCY0 68 aa11.95□□□□□ -0.5
NOM1-208ENST00000489850 SPAG11AQ6PDA7 123 aa11.94□□□□□ -0.5
NOM1-208ENST00000489850 VAMP3Q15836 100 aa11.92□□□□□ -0.5
NOM1-208ENST00000489850 ST20-AS1Q8NBB2 130 aa11.92□□□□□ -0.5
NOM1-208ENST00000489850 NHP2Q9NX24 153 aaKnown RBP11.92□□□□□ -0.5
NOM1-208ENST00000489850 C4orf48Q5BLP8 95 aa11.91□□□□□ -0.5
NOM1-208ENST00000489850 IGLV9-49A0A0B4J1Y8 123 aa11.9□□□□□ -0.5
NOM1-208ENST00000489850 TAL2Q16559 108 aa11.9□□□□□ -0.5
NOM1-208ENST00000489850 C2orf91Q6ZV80 131 aa11.9□□□□□ -0.5
NOM1-208ENST00000489850 SPRR1BP22528 89 aa11.89□□□□□ -0.51
NOM1-208ENST00000489850 SSBP3-AS1Q7Z2R9 100 aa11.89□□□□□ -0.51
NOM1-208ENST00000489850 Q8NBF4 154 aa11.89□□□□□ -0.51
NOM1-208ENST00000489850 MOBPQ13875 183 aa11.88□□□□□ -0.51
NOM1-208ENST00000489850 C12orf57Q99622 126 aa11.88□□□□□ -0.51
NOM1-208ENST00000489850 SLC25A20O43772 301 aa11.87□□□□□ -0.51
NOM1-208ENST00000489850 PRR4Q16378 134 aa11.86□□□□□ -0.51
NOM1-208ENST00000489850 TMEM238LA0A1B0GVL6 79 aa11.85□□□□□ -0.51
NOM1-208ENST00000489850 A6NJY4 79 aa11.85□□□□□ -0.51
NOM1-208ENST00000489850 C9orf153Q5TBE3 101 aa11.85□□□□□ -0.51
NOM1-208ENST00000489850 RAB37Q96AX2 223 aa11.85□□□□□ -0.51
NOM1-208ENST00000489850 TEX49A0A1B0GTD5 131 aa11.84□□□□□ -0.51
NOM1-208ENST00000489850 CEND1Q8N111 149 aa11.84□□□□□ -0.51
NOM1-208ENST00000489850 LAMTOR3Q9UHA4 124 aa11.84□□□□□ -0.51
NOM1-208ENST00000489850 A0A0B4J2C4 111 aa11.83□□□□□ -0.52
NOM1-208ENST00000489850 SPINK1P00995 79 aa11.83□□□□□ -0.52
NOM1-208ENST00000489850 CFC1BP0CG36 223 aa11.83□□□□□ -0.52
NOM1-208ENST00000489850 CFC1P0CG37 223 aa11.83□□□□□ -0.52
NOM1-208ENST00000489850 BVES-AS1Q5T3Y7 98 aa11.83□□□□□ -0.52
NOM1-208ENST00000489850 LRP2P98164 4655 aa11.83□□□□□ -0.52
NOM1-208ENST00000489850 DEFB105AQ8NG35 78 aa11.81□□□□□ -0.52
NOM1-208ENST00000489850 IGLV5-48A0A075B6I7 105 aa11.8□□□□□ -0.52
NOM1-208ENST00000489850 LINC00575Q6W349 94 aa11.8□□□□□ -0.52
NOM1-208ENST00000489850 UQCR10Q9UDW1 63 aa11.8□□□□□ -0.52
NOM1-208ENST00000489850 RPS29P62273 56 aaKnown RBP11.79□□□□□ -0.52
NOM1-208ENST00000489850 UBR4Q5T4S7 5183 aa11.79□□□□□ -0.52
NOM1-208ENST00000489850 HSD52Q0P140 79 aa11.78□□□□□ -0.52
NOM1-208ENST00000489850 hADV29S1A0JD25 119 aa11.77□□□□□ -0.53
NOM1-208ENST00000489850 H7C2G1 150 aa11.77□□□□□ -0.53
NOM1-208ENST00000489850 LINC01547P58512 204 aaPredicted RBP11.75□□□□□ -0.53
NOM1-208ENST00000489850 PRO1854Q9UHT4 67 aa11.75□□□□□ -0.53
NOM1-208ENST00000489850 SNCGO76070 127 aa11.74□□□□□ -0.53
NOM1-208ENST00000489850 FXYD2P54710 66 aa11.74□□□□□ -0.53
NOM1-208ENST00000489850 Q1RN00 199 aa11.74□□□□□ -0.53
NOM1-208ENST00000489850 RETNLBQ9BQ08 111 aa11.74□□□□□ -0.53
NOM1-208ENST00000489850 H0YGX0 51 aa11.71□□□□□ -0.53
NOM1-208ENST00000489850 Q6ZQY7 126 aa11.71□□□□□ -0.53
NOM1-208ENST00000489850 SMIM29Q86T20 159 aa11.71□□□□□ -0.53
NOM1-208ENST00000489850 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.7□□□□□ -0.54
NOM1-208ENST00000489850 FP248Q71RG6 208 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms