RNA–Protein interactions for RNA: ENST00000489443.2

LMX1A-204, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

TSL 1 (best)

Gene LMX1A, Length 1,255 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-204ENST00000489443 FAM229BQ4G0N7 80 aa9.3□□□□□ -0.92
LMX1A-204ENST00000489443 OR13C6PQ8NH95 151 aa9.3□□□□□ -0.92
LMX1A-204ENST00000489443 TRAV23DV6A0A075B6W5 121 aa9.29□□□□□ -0.92
LMX1A-204ENST00000489443 B5MCH6 92 aa9.29□□□□□ -0.92
LMX1A-204ENST00000489443 SCGB1D1O95968 90 aa9.29□□□□□ -0.92
LMX1A-204ENST00000489443 KRTAP13-2Q52LG2 175 aa9.29□□□□□ -0.92
LMX1A-204ENST00000489443 SMCR5Q8TEV8 140 aa9.29□□□□□ -0.92
LMX1A-204ENST00000489443 SPANXDQ9BXN6 97 aa9.29□□□□□ -0.92
LMX1A-204ENST00000489443 SPRR4Q96PI1 79 aa9.27□□□□□ -0.93
LMX1A-204ENST00000489443 ZNF706Q9Y5V0 76 aaPredicted RBP9.27□□□□□ -0.93
LMX1A-204ENST00000489443 ZNF73O43830 326 aaPredicted RBP9.26□□□□□ -0.93
LMX1A-204ENST00000489443 COPS9Q8WXC6 57 aa9.26□□□□□ -0.93
LMX1A-204ENST00000489443 IFITM1P13164 125 aa9.25□□□□□ -0.93
LMX1A-204ENST00000489443 Q6ZRX8 168 aa9.25□□□□□ -0.93
LMX1A-204ENST00000489443 LINC00518Q8N0U6 118 aa9.25□□□□□ -0.93
LMX1A-204ENST00000489443 CBY1Q9Y3M2 126 aa9.25□□□□□ -0.93
LMX1A-204ENST00000489443 TSPAN13O95857 204 aa9.24□□□□□ -0.93
LMX1A-204ENST00000489443 Q6ZVH6 145 aa9.24□□□□□ -0.93
LMX1A-204ENST00000489443 MUSTN1Q8IVN3 82 aa9.24□□□□□ -0.93
LMX1A-204ENST00000489443 Q9BRP9 147 aa9.24□□□□□ -0.93
LMX1A-204ENST00000489443 PPDPFQ9H3Y8 114 aa9.24□□□□□ -0.93
LMX1A-204ENST00000489443 ERC2-IT1O76042 136 aa9.23□□□□□ -0.93
LMX1A-204ENST00000489443 HINT1P49773 126 aaPredicted RBP9.22□□□□□ -0.93
LMX1A-204ENST00000489443 JOSD1Q15040 202 aaPredicted RBP9.22□□□□□ -0.93
LMX1A-204ENST00000489443 C3orf22Q8N5N4 141 aa9.22□□□□□ -0.93
LMX1A-204ENST00000489443 GAGE2AQ6NT46 116 aa9.21□□□□□ -0.94
LMX1A-204ENST00000489443 UBR4Q5T4S7 5183 aa9.2□□□□□ -0.94
LMX1A-204ENST00000489443 LINC00304Q8N9R0 145 aa9.2□□□□□ -0.94
LMX1A-204ENST00000489443 LRP2P98164 4655 aa9.2□□□□□ -0.94
LMX1A-204ENST00000489443 A6NDN8 102 aa9.19□□□□□ -0.94
LMX1A-204ENST00000489443 C6orf99Q4VX62 202 aa9.17□□□□□ -0.94
LMX1A-204ENST00000489443 LINC00483Q53H64 154 aa9.17□□□□□ -0.94
LMX1A-204ENST00000489443 PRR4Q16378 134 aa9.16□□□□□ -0.94
LMX1A-204ENST00000489443 COX8AP10176 69 aa9.15□□□□□ -0.94
LMX1A-204ENST00000489443 COX7BP24311 80 aa9.15□□□□□ -0.94
LMX1A-204ENST00000489443 ST20-AS1Q8NBB2 130 aa9.14□□□□□ -0.95
LMX1A-204ENST00000489443 DHRS4-AS1Q9P1J3 65 aa9.14□□□□□ -0.95
LMX1A-204ENST00000489443 IGLV9-49A0A0B4J1Y8 123 aa9.13□□□□□ -0.95
LMX1A-204ENST00000489443 TRAV13-2A0A0B4J235 113 aa9.13□□□□□ -0.95
LMX1A-204ENST00000489443 ELOF1P60002 83 aaKnown RBP9.13□□□□□ -0.95
LMX1A-204ENST00000489443 PAM16Q9Y3D7 125 aa9.13□□□□□ -0.95
LMX1A-204ENST00000489443 SPATA45Q537H7 98 aa9.12□□□□□ -0.95
LMX1A-204ENST00000489443 Q8NBF4 154 aa9.12□□□□□ -0.95
LMX1A-204ENST00000489443 C14orf144Q96I85 54 aa9.12□□□□□ -0.95
LMX1A-204ENST00000489443 HIST1H4GQ99525 98 aa9.12□□□□□ -0.95
LMX1A-204ENST00000489443 VAMP8Q9BV40 100 aa9.12□□□□□ -0.95
LMX1A-204ENST00000489443 TMA7Q9Y2S6 64 aaKnown RBP9.12□□□□□ -0.95
LMX1A-204ENST00000489443 A4D1N5 150 aa9.11□□□□□ -0.95
LMX1A-204ENST00000489443 C4orf48Q5BLP8 95 aa9.11□□□□□ -0.95
LMX1A-204ENST00000489443 TRBV7-6A0A0J9YX20 115 aa9.1□□□□□ -0.95
LMX1A-204ENST00000489443 DLEU1O43261 78 aa9.1□□□□□ -0.95
LMX1A-204ENST00000489443 MOBPQ13875 183 aa9.1□□□□□ -0.95
LMX1A-204ENST00000489443 SPAG11AQ6PDA7 123 aa9.09□□□□□ -0.95
LMX1A-204ENST00000489443 SMIM11BQ8TCY0 68 aa9.09□□□□□ -0.95
LMX1A-204ENST00000489443 RETNLBQ9BQ08 111 aa9.09□□□□□ -0.95
LMX1A-204ENST00000489443 LPAP08519 4548 aa9.08□□□□□ -0.96
LMX1A-204ENST00000489443 A0A1B0GWB2 263 aa9.08□□□□□ -0.96
LMX1A-204ENST00000489443 CTAG1AP78358 180 aa9.06□□□□□ -0.96
LMX1A-204ENST00000489443 C9orf153Q5TBE3 101 aa9.06□□□□□ -0.96
LMX1A-204ENST00000489443 SLC25A34Q6PIV7 304 aa9.06□□□□□ -0.96
LMX1A-204ENST00000489443 SSBP3-AS1Q7Z2R9 100 aa9.06□□□□□ -0.96
LMX1A-204ENST00000489443 DEFB105AQ8NG35 78 aa9.06□□□□□ -0.96
LMX1A-204ENST00000489443 C12orf57Q99622 126 aa9.06□□□□□ -0.96
LMX1A-204ENST00000489443 TAL2Q16559 108 aa9.05□□□□□ -0.96
LMX1A-204ENST00000489443 SPRR1BP22528 89 aa9.03□□□□□ -0.96
LMX1A-204ENST00000489443 VAMP3Q15836 100 aa9.03□□□□□ -0.96
LMX1A-204ENST00000489443 PYY3Q5JQD4 70 aa9.03□□□□□ -0.96
LMX1A-204ENST00000489443 HIGD1BQ9P298 99 aa9.03□□□□□ -0.96
LMX1A-204ENST00000489443 SPINK1P00995 79 aa9.02□□□□□ -0.97
LMX1A-204ENST00000489443 C2orf91Q6ZV80 131 aa9.01□□□□□ -0.97
LMX1A-204ENST00000489443 LAMTOR3Q9UHA4 124 aa9.01□□□□□ -0.97
LMX1A-204ENST00000489443 TEX49A0A1B0GTD5 131 aa9□□□□□ -0.97
LMX1A-204ENST00000489443 Q1RN00 199 aa9□□□□□ -0.97
LMX1A-204ENST00000489443 NHP2Q9NX24 153 aaKnown RBP9□□□□□ -0.97
LMX1A-204ENST00000489443 RNF213Q63HN8 5207 aa8.99□□□□□ -0.97
LMX1A-204ENST00000489443 SLC25A20O43772 301 aa8.99□□□□□ -0.97
LMX1A-204ENST00000489443 H7C2G1 150 aa8.98□□□□□ -0.97
LMX1A-204ENST00000489443 CFC1BP0CG36 223 aa8.98□□□□□ -0.97
LMX1A-204ENST00000489443 CFC1P0CG37 223 aa8.98□□□□□ -0.97
LMX1A-204ENST00000489443 IGLV7-46A0A075B6I9 117 aa8.97□□□□□ -0.97
LMX1A-204ENST00000489443 RAB37Q96AX2 223 aa8.97□□□□□ -0.97
LMX1A-204ENST00000489443 LINC01547P58512 204 aaPredicted RBP8.96□□□□□ -0.98
LMX1A-204ENST00000489443 LINC00575Q6W349 94 aa8.96□□□□□ -0.98
LMX1A-204ENST00000489443 IGLV5-48A0A075B6I7 105 aa8.95□□□□□ -0.98
LMX1A-204ENST00000489443 CEND1Q8N111 149 aa8.95□□□□□ -0.98
LMX1A-204ENST00000489443 hADV29S1A0JD25 119 aa8.94□□□□□ -0.98
LMX1A-204ENST00000489443 SMIM29Q86T20 159 aa8.94□□□□□ -0.98
LMX1A-204ENST00000489443 RPS29P62273 56 aaKnown RBP8.93□□□□□ -0.98
LMX1A-204ENST00000489443 BVES-AS1Q5T3Y7 98 aa8.93□□□□□ -0.98
LMX1A-204ENST00000489443 HRCT1Q6UXD1 115 aa8.93□□□□□ -0.98
LMX1A-204ENST00000489443 Q8N377 158 aa8.93□□□□□ -0.98
LMX1A-204ENST00000489443 A0A0B4J2C4 111 aa8.92□□□□□ -0.98
LMX1A-204ENST00000489443 TMEM238LA0A1B0GVL6 79 aa8.91□□□□□ -0.98
LMX1A-204ENST00000489443 A6NJY4 79 aa8.91□□□□□ -0.98
LMX1A-204ENST00000489443 Q6ZQY7 126 aa8.91□□□□□ -0.98
LMX1A-204ENST00000489443 FP248Q71RG6 208 aaPredicted RBP8.91□□□□□ -0.98
LMX1A-204ENST00000489443 FXYD2P54710 66 aa8.9□□□□□ -0.98
LMX1A-204ENST00000489443 TPRXLQ17RH7 258 aa8.9□□□□□ -0.98
LMX1A-204ENST00000489443 PRO1933Q9H354 126 aa8.9□□□□□ -0.98
LMX1A-204ENST00000489443 KRTAP3-3Q9BYR6 98 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms