RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 Q8NDZ9 215 aa8.16□□□□□ -1.1
SPTLC1-207ENST00000488921 M0R378 163 aa8.15□□□□□ -1.1
SPTLC1-207ENST00000488921 DAND5Q8N907 189 aa8.15□□□□□ -1.1
SPTLC1-207ENST00000488921 UQCR10Q9UDW1 63 aa8.15□□□□□ -1.1
SPTLC1-207ENST00000488921 PRR4Q16378 134 aa8.14□□□□□ -1.11
SPTLC1-207ENST00000488921 ADAMTSL4-AS1Q5T5F5 129 aa8.14□□□□□ -1.11
SPTLC1-207ENST00000488921 LINC00518Q8N0U6 118 aa8.13□□□□□ -1.11
SPTLC1-207ENST00000488921 SPANXDQ9BXN6 97 aa8.13□□□□□ -1.11
SPTLC1-207ENST00000488921 SPANXCQ9NY87 97 aa8.13□□□□□ -1.11
SPTLC1-207ENST00000488921 TSTD3H0UI37 97 aa8.12□□□□□ -1.11
SPTLC1-207ENST00000488921 PRYO14603 147 aa8.12□□□□□ -1.11
SPTLC1-207ENST00000488921 IFITM1P13164 125 aa8.12□□□□□ -1.11
SPTLC1-207ENST00000488921 NPC2P61916 151 aa8.12□□□□□ -1.11
SPTLC1-207ENST00000488921 HIST1H4GQ99525 98 aa8.12□□□□□ -1.11
SPTLC1-207ENST00000488921 LITAFQ99732 161 aa8.12□□□□□ -1.11
SPTLC1-207ENST00000488921 PRO1933Q9H354 126 aa8.12□□□□□ -1.11
SPTLC1-207ENST00000488921 HIGD1BQ9P298 99 aa8.12□□□□□ -1.11
SPTLC1-207ENST00000488921 TSPAN13O95857 204 aa8.11□□□□□ -1.11
SPTLC1-207ENST00000488921 LINC00308Q8TCZ7 52 aa8.11□□□□□ -1.11
SPTLC1-207ENST00000488921 HIGD2AQ9BW72 106 aa8.11□□□□□ -1.11
SPTLC1-207ENST00000488921 SPANXB1Q9NS25 103 aaPredicted RBP8.11□□□□□ -1.11
SPTLC1-207ENST00000488921 ANAPC11Q9NYG5 84 aa8.11□□□□□ -1.11
SPTLC1-207ENST00000488921 NCR3O14931 201 aa8.1□□□□□ -1.11
SPTLC1-207ENST00000488921 KRTAP13-2Q52LG2 175 aa8.1□□□□□ -1.11
SPTLC1-207ENST00000488921 RNF213Q63HN8 5207 aa8.1□□□□□ -1.11
SPTLC1-207ENST00000488921 LOC107984156A0A0G2JMH3 177 aa8.09□□□□□ -1.11
SPTLC1-207ENST00000488921 MUSTN1Q8IVN3 82 aa8.09□□□□□ -1.11
SPTLC1-207ENST00000488921 ARL17AQ8IVW1 177 aa8.09□□□□□ -1.11
SPTLC1-207ENST00000488921 LINC00304Q8N9R0 145 aa8.09□□□□□ -1.11
SPTLC1-207ENST00000488921 ZNF706Q9Y5V0 76 aaPredicted RBP8.09□□□□□ -1.11
SPTLC1-207ENST00000488921 TAL2Q16559 108 aa8.08□□□□□ -1.12
SPTLC1-207ENST00000488921 LINC00337Q8N6G1 96 aa8.08□□□□□ -1.12
SPTLC1-207ENST00000488921 LOC100996750A0A140TA64 210 aa8.07□□□□□ -1.12
SPTLC1-207ENST00000488921 CTAG1AP78358 180 aa8.07□□□□□ -1.12
SPTLC1-207ENST00000488921 C2orf91Q6ZV80 131 aa8.07□□□□□ -1.12
SPTLC1-207ENST00000488921 KRTAP4-6Q9BYQ5 205 aa8.07□□□□□ -1.12
SPTLC1-207ENST00000488921 PPDPFQ9H3Y8 114 aa8.07□□□□□ -1.12
SPTLC1-207ENST00000488921 KCNQ1DNQ9H478 68 aa8.07□□□□□ -1.12
SPTLC1-207ENST00000488921 ETDCA0A1B0GVM5 59 aa8.06□□□□□ -1.12
SPTLC1-207ENST00000488921 NDUFC2O95298 119 aa8.06□□□□□ -1.12
SPTLC1-207ENST00000488921 SPRR1AP35321 89 aa8.06□□□□□ -1.12
SPTLC1-207ENST00000488921 TRBV10-3A0A0K0K1G6 114 aa8.05□□□□□ -1.12
SPTLC1-207ENST00000488921 TRBV10-2A0A0K0K1G8 114 aa8.05□□□□□ -1.12
SPTLC1-207ENST00000488921 SOSTDC1Q6X4U4 206 aa8.05□□□□□ -1.12
SPTLC1-207ENST00000488921 SPRR4Q96PI1 79 aa8.05□□□□□ -1.12
SPTLC1-207ENST00000488921 HSD52Q0P140 79 aa8.04□□□□□ -1.12
SPTLC1-207ENST00000488921 TMEM238LA0A1B0GVL6 79 aa8.03□□□□□ -1.12
SPTLC1-207ENST00000488921 A6NJY4 79 aa8.03□□□□□ -1.12
SPTLC1-207ENST00000488921 DDTP30046 118 aa8.03□□□□□ -1.12
SPTLC1-207ENST00000488921 S100A7L2Q5SY68 101 aa8.03□□□□□ -1.12
SPTLC1-207ENST00000488921 CEND1Q8N111 149 aa8.03□□□□□ -1.12
SPTLC1-207ENST00000488921 KRTAP4-16G5E9R7 235 aaPredicted RBP8.02□□□□□ -1.13
SPTLC1-207ENST00000488921 EIF4EBP3O60516 100 aaPredicted RBP8.02□□□□□ -1.13
SPTLC1-207ENST00000488921 C3orf22Q8N5N4 141 aa8.02□□□□□ -1.13
SPTLC1-207ENST00000488921 OR13C6PQ8NH95 151 aa8.02□□□□□ -1.13
SPTLC1-207ENST00000488921 CBY1Q9Y3M2 126 aa8.02□□□□□ -1.13
SPTLC1-207ENST00000488921 A4D1N5 150 aa8.01□□□□□ -1.13
SPTLC1-207ENST00000488921 SPAG11AQ6PDA7 123 aa8.01□□□□□ -1.13
SPTLC1-207ENST00000488921 TRAV13-2A0A0B4J235 113 aa8□□□□□ -1.13
SPTLC1-207ENST00000488921 A6NDN8 102 aa8□□□□□ -1.13
SPTLC1-207ENST00000488921 SMCR5Q8TEV8 140 aa8□□□□□ -1.13
SPTLC1-207ENST00000488921 B5MCH6 92 aa7.99□□□□□ -1.13
SPTLC1-207ENST00000488921 RAB37Q96AX2 223 aa7.99□□□□□ -1.13
SPTLC1-207ENST00000488921 M0R143 59 aa7.98□□□□□ -1.13
SPTLC1-207ENST00000488921 RETNLBQ9BQ08 111 aa7.98□□□□□ -1.13
SPTLC1-207ENST00000488921 IGLV6-57P01721 117 aa7.97□□□□□ -1.13
SPTLC1-207ENST00000488921 Q6ZRX8 168 aa7.97□□□□□ -1.13
SPTLC1-207ENST00000488921 TRAV23DV6A0A075B6W5 121 aa7.96□□□□□ -1.14
SPTLC1-207ENST00000488921 LINC00483Q53H64 154 aa7.96□□□□□ -1.14
SPTLC1-207ENST00000488921 HINT1P49773 126 aaPredicted RBP7.95□□□□□ -1.14
SPTLC1-207ENST00000488921 FXYD2P54710 66 aa7.95□□□□□ -1.14
SPTLC1-207ENST00000488921 TPRXLQ17RH7 258 aa7.95□□□□□ -1.14
SPTLC1-207ENST00000488921 A0A0B4J2C4 111 aa7.94□□□□□ -1.14
SPTLC1-207ENST00000488921 CFC1BP0CG36 223 aa7.94□□□□□ -1.14
SPTLC1-207ENST00000488921 CFC1P0CG37 223 aa7.94□□□□□ -1.14
SPTLC1-207ENST00000488921 BVES-AS1Q5T3Y7 98 aa7.94□□□□□ -1.14
SPTLC1-207ENST00000488921 GAGE2AQ6NT46 116 aa7.94□□□□□ -1.14
SPTLC1-207ENST00000488921 Q8NBF4 154 aa7.94□□□□□ -1.14
SPTLC1-207ENST00000488921 NHP2Q9NX24 153 aaKnown RBP7.94□□□□□ -1.14
SPTLC1-207ENST00000488921 IGLV7-46A0A075B6I9 117 aa7.93□□□□□ -1.14
SPTLC1-207ENST00000488921 Q9BRP9 147 aa7.93□□□□□ -1.14
SPTLC1-207ENST00000488921 PCP4L1A6NKN8 68 aa7.92□□□□□ -1.14
SPTLC1-207ENST00000488921 ZNF73O43830 326 aaPredicted RBP7.92□□□□□ -1.14
SPTLC1-207ENST00000488921 CDIP1Q9H305 208 aa7.92□□□□□ -1.14
SPTLC1-207ENST00000488921 PRO1854Q9UHT4 67 aa7.92□□□□□ -1.14
SPTLC1-207ENST00000488921 A0A0U1RQV1 116 aa7.91□□□□□ -1.14
SPTLC1-207ENST00000488921 ERC2-IT1O76042 136 aa7.91□□□□□ -1.14
SPTLC1-207ENST00000488921 SPINK1P00995 79 aa7.91□□□□□ -1.14
SPTLC1-207ENST00000488921 BATFQ16520 125 aa7.91□□□□□ -1.14
SPTLC1-207ENST00000488921 Q1RN00 199 aa7.91□□□□□ -1.14
SPTLC1-207ENST00000488921 FP248Q71RG6 208 aaPredicted RBP7.91□□□□□ -1.14
SPTLC1-207ENST00000488921 H7C2G1 150 aa7.9□□□□□ -1.14
SPTLC1-207ENST00000488921 VAMP3Q15836 100 aa7.9□□□□□ -1.14
SPTLC1-207ENST00000488921 IGLV9-49A0A0B4J1Y8 123 aa7.89□□□□□ -1.15
SPTLC1-207ENST00000488921 MOBPQ13875 183 aa7.89□□□□□ -1.15
SPTLC1-207ENST00000488921 SSBP3-AS1Q7Z2R9 100 aa7.89□□□□□ -1.15
SPTLC1-207ENST00000488921 RPS29P62273 56 aaKnown RBP7.88□□□□□ -1.15
SPTLC1-207ENST00000488921 SMIM11BQ8TCY0 68 aa7.88□□□□□ -1.15
SPTLC1-207ENST00000488921 MUC2Q02817 5179 aa7.87□□□□□ -1.15
SPTLC1-207ENST00000488921 A0A1B0GWB2 263 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms