RNA–Protein interactions for RNA: ENST00000488032.1

PCGF3-212, Transcript of polycomb group ring finger 3, humanhuman

TSL 4

Gene PCGF3, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-212ENST00000488032 LY6EQ16553 131 aa2.55□□□□□ -2
PCGF3-212ENST00000488032 DEFB110Q30KQ9 67 aa2.55□□□□□ -2
PCGF3-212ENST00000488032 KRTAP11-1Q8IUC1 163 aa2.55□□□□□ -2
PCGF3-212ENST00000488032 LINC00304Q8N9R0 145 aa2.55□□□□□ -2
PCGF3-212ENST00000488032 TYMSOSQ8TAI1 123 aa2.55□□□□□ -2
PCGF3-212ENST00000488032 Q9Y3F1 56 aa2.55□□□□□ -2
PCGF3-212ENST00000488032 GVQW2A0A096LPI5 108 aaPredicted RBP2.54□□□□□ -2
PCGF3-212ENST00000488032 PCOTHQ58A44 107 aa2.54□□□□□ -2
PCGF3-212ENST00000488032 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.54□□□□□ -2
PCGF3-212ENST00000488032 COX6B2Q6YFQ2 88 aa2.54□□□□□ -2
PCGF3-212ENST00000488032 PRO3102Q9H379 93 aa2.54□□□□□ -2
PCGF3-212ENST00000488032 KRTAP10-3P60369 221 aa2.53□□□□□ -2
PCGF3-212ENST00000488032 H3BUA1 57 aa2.52□□□□□ -2.01
PCGF3-212ENST00000488032 CRIPTQ9P021 101 aa2.51□□□□□ -2.01
PCGF3-212ENST00000488032 PLCE1Q9P212 2302 aa2.51□□□□□ -2.01
PCGF3-212ENST00000488032 APELAP0DMC3 54 aa2.5□□□□□ -2.01
PCGF3-212ENST00000488032 DEFB104AQ8WTQ1 72 aa2.5□□□□□ -2.01
PCGF3-212ENST00000488032 MRPL34Q9BQ48 92 aaKnown RBP2.5□□□□□ -2.01
PCGF3-212ENST00000488032 USMG5Q96IX5 58 aa2.49□□□□□ -2.01
PCGF3-212ENST00000488032 CUL9Q8IWT3 2517 aa2.48□□□□□ -2.01
PCGF3-212ENST00000488032 MMP24-AS1A0A0U1RRL7 71 aa2.48□□□□□ -2.01
PCGF3-212ENST00000488032 GIG44P09565 113 aaPredicted RBP2.48□□□□□ -2.01
PCGF3-212ENST00000488032 KRTAP1-4P0C5Y4 121 aa2.48□□□□□ -2.01
PCGF3-212ENST00000488032 DEFB109BQ30KR1 87 aa2.48□□□□□ -2.01
PCGF3-212ENST00000488032 TECTAO75443 2155 aa2.47□□□□□ -2.01
PCGF3-212ENST00000488032 INE1O15225 51 aa2.47□□□□□ -2.01
PCGF3-212ENST00000488032 CD52P31358 61 aa2.47□□□□□ -2.01
PCGF3-212ENST00000488032 Q6ZRX8 168 aa2.47□□□□□ -2.01
PCGF3-212ENST00000488032 AHCTF1Q8WYP5 2266 aa2.46□□□□□ -2.02
PCGF3-212ENST00000488032 A8MTW9 85 aa2.46□□□□□ -2.02
PCGF3-212ENST00000488032 KRTAP9-6A8MVA2 160 aa2.46□□□□□ -2.02
PCGF3-212ENST00000488032 PLAC4Q8WY50 150 aa2.46□□□□□ -2.02
PCGF3-212ENST00000488032 CNOT1A5YKK6 2376 aaKnown RBP2.45□□□□□ -2.02
PCGF3-212ENST00000488032 BRWD1Q9NSI6 2320 aa2.45□□□□□ -2.02
PCGF3-212ENST00000488032 RHPN1-AS1Q9BWJ2 59 aa2.44□□□□□ -2.02
PCGF3-212ENST00000488032 R4GN34 69 aa2.44□□□□□ -2.02
PCGF3-212ENST00000488032 G3V318 75 aa2.43□□□□□ -2.02
PCGF3-212ENST00000488032 H3BUX3 64 aa2.43□□□□□ -2.02
PCGF3-212ENST00000488032 SPINK13Q1W4C9 94 aa2.43□□□□□ -2.02
PCGF3-212ENST00000488032 C10orf99Q6UWK7 81 aa2.43□□□□□ -2.02
PCGF3-212ENST00000488032 CACNA1BQ00975 2339 aa2.43□□□□□ -2.02
PCGF3-212ENST00000488032 WNK2Q9Y3S1 2297 aa2.43□□□□□ -2.02
PCGF3-212ENST00000488032 DEFB108BQ8NET1 73 aa2.42□□□□□ -2.02
PCGF3-212ENST00000488032 DEFB105AQ8NG35 78 aa2.42□□□□□ -2.02
PCGF3-212ENST00000488032 IGFL1Q6UW32 110 aa2.41□□□□□ -2.02
PCGF3-212ENST00000488032 CLPSL2Q6UWE3 100 aa2.41□□□□□ -2.02
PCGF3-212ENST00000488032 H0YAA0 97 aa2.4□□□□□ -2.03
PCGF3-212ENST00000488032 TRIOBPQ9H2D6 2365 aa2.4□□□□□ -2.03
PCGF3-212ENST00000488032 ABCA1O95477 2261 aa2.39□□□□□ -2.03
PCGF3-212ENST00000488032 SPRR1AP35321 89 aa2.39□□□□□ -2.03
PCGF3-212ENST00000488032 RPL37P61927 97 aaKnown RBP2.39□□□□□ -2.03
PCGF3-212ENST00000488032 H1FX-AS1Q4G0G2 97 aa2.39□□□□□ -2.03
PCGF3-212ENST00000488032 ALMS1Q8TCU4 4167 aa2.39□□□□□ -2.03
PCGF3-212ENST00000488032 COL6A6A6NMZ7 2263 aa2.38□□□□□ -2.03
PCGF3-212ENST00000488032 UBE2DNLQ8IWF7 75 aa2.38□□□□□ -2.03
PCGF3-212ENST00000488032 ZFHX2Q9C0A1 2572 aaPredicted RBP2.38□□□□□ -2.03
PCGF3-212ENST00000488032 SPACA4Q8TDM5 124 aa2.37□□□□□ -2.03
PCGF3-212ENST00000488032 CACNA1EQ15878 2313 aa2.37□□□□□ -2.03
PCGF3-212ENST00000488032 HTN1P15515 57 aa2.36□□□□□ -2.03
PCGF3-212ENST00000488032 SPRR1BP22528 89 aa2.36□□□□□ -2.03
PCGF3-212ENST00000488032 TPRXLQ17RH7 258 aa2.36□□□□□ -2.03
PCGF3-212ENST00000488032 Q6ZSA8 131 aa2.36□□□□□ -2.03
PCGF3-212ENST00000488032 SPTBN1Q01082 2364 aaKnown RBP2.35□□□□□ -2.03
PCGF3-212ENST00000488032 LCE3EQ5T5B0 92 aa2.35□□□□□ -2.03
PCGF3-212ENST00000488032 UNQ6190/PRO20217Q6UXQ8 127 aa2.35□□□□□ -2.03
PCGF3-212ENST00000488032 PP632Q6XCG6 107 aa2.35□□□□□ -2.03
PCGF3-212ENST00000488032 ATRXP46100 2492 aa2.35□□□□□ -2.03
PCGF3-212ENST00000488032 ANKRD17O75179 2603 aaKnown RBP2.34□□□□□ -2.03
PCGF3-212ENST00000488032 TPRP12270 2363 aaKnown RBP2.34□□□□□ -2.03
PCGF3-212ENST00000488032 Q6ZRN7 208 aaPredicted RBP2.34□□□□□ -2.03
PCGF3-212ENST00000488032 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.33□□□□□ -2.04
PCGF3-212ENST00000488032 KRTAP12-2P59991 146 aa2.33□□□□□ -2.04
PCGF3-212ENST00000488032 KRTAP13-3Q3SY46 172 aa2.33□□□□□ -2.04
PCGF3-212ENST00000488032 DEFB119Q8N690 84 aa2.33□□□□□ -2.04
PCGF3-212ENST00000488032 CACNA1GO43497 2377 aa2.33□□□□□ -2.04
PCGF3-212ENST00000488032 A0A0C4DFX4 3053 aa2.32□□□□□ -2.04
PCGF3-212ENST00000488032 DEFB1P60022 68 aa2.32□□□□□ -2.04
PCGF3-212ENST00000488032 DEFB123Q8N688 67 aa2.31□□□□□ -2.04
PCGF3-212ENST00000488032 WNK1Q9H4A3 2382 aa2.31□□□□□ -2.04
PCGF3-212ENST00000488032 DEFB130BP0DP73 79 aa2.3□□□□□ -2.04
PCGF3-212ENST00000488032 DEFB130AP0DP74 79 aa2.3□□□□□ -2.04
PCGF3-212ENST00000488032 NOP10Q9NPE3 64 aaKnown RBP2.3□□□□□ -2.04
PCGF3-212ENST00000488032 PRO0255Q9UI72 69 aa2.3□□□□□ -2.04
PCGF3-212ENST00000488032 K7EIL1 84 aa2.29□□□□□ -2.04
PCGF3-212ENST00000488032 BRD3OSQ6XYD6 125 aa2.29□□□□□ -2.04
PCGF3-212ENST00000488032 PRLHP81277 87 aa2.28□□□□□ -2.04
PCGF3-212ENST00000488032 LELP1Q5T871 98 aa2.28□□□□□ -2.04
PCGF3-212ENST00000488032 LYNX1P0DP58 116 aa2.27□□□□□ -2.05
PCGF3-212ENST00000488032 DEFB133Q30KQ1 61 aa2.27□□□□□ -2.05
PCGF3-212ENST00000488032 ZDBF2Q9HCK1 2354 aa2.27□□□□□ -2.05
PCGF3-212ENST00000488032 AKAP6Q13023 2319 aa2.25□□□□□ -2.05
PCGF3-212ENST00000488032 WDR87Q6ZQQ6 2873 aa2.24□□□□□ -2.05
PCGF3-212ENST00000488032 ACACAQ13085 2346 aa2.23□□□□□ -2.05
PCGF3-212ENST00000488032 KRTAP5-1Q6L8H4 278 aa2.22□□□□□ -2.05
PCGF3-212ENST00000488032 FN1P02751 2386 aaKnown RBP2.22□□□□□ -2.05
PCGF3-212ENST00000488032 SPINK1P00995 79 aa2.21□□□□□ -2.06
PCGF3-212ENST00000488032 MAP1BP46821 2468 aaKnown RBP2.21□□□□□ -2.06
PCGF3-212ENST00000488032 C10orf95Q9H7T3 257 aa2.21□□□□□ -2.06
PCGF3-212ENST00000488032 IGF2RP11717 2491 aa2.2□□□□□ -2.06
PCGF3-212ENST00000488032 PCNX1Q96RV3 2341 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms