RNA–Protein interactions for RNA: ENST00000487952.1

NUP188-207, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-207ENST00000487952 RPL13AP40429 203 aaKnown RBP8.65□□□□□ -1.02
NUP188-207ENST00000487952 HINT1P49773 126 aaPredicted RBP8.65□□□□□ -1.02
NUP188-207ENST00000487952 ZNF73O43830 326 aaPredicted RBP8.64□□□□□ -1.03
NUP188-207ENST00000487952 CFC1BP0CG36 223 aa8.64□□□□□ -1.03
NUP188-207ENST00000487952 CFC1P0CG37 223 aa8.64□□□□□ -1.03
NUP188-207ENST00000487952 DIRC1Q969H9 104 aa8.64□□□□□ -1.03
NUP188-207ENST00000487952 NHP2Q9NX24 153 aaKnown RBP8.64□□□□□ -1.03
NUP188-207ENST00000487952 RPL28P46779 137 aaKnown RBP8.63□□□□□ -1.03
NUP188-207ENST00000487952 BVES-AS1Q5T3Y7 98 aa8.63□□□□□ -1.03
NUP188-207ENST00000487952 SPRR1AP35321 89 aa8.62□□□□□ -1.03
NUP188-207ENST00000487952 KRTAP10-4P60372 401 aaPredicted RBP8.62□□□□□ -1.03
NUP188-207ENST00000487952 KRTAP17-1Q9BYP8 105 aa8.62□□□□□ -1.03
NUP188-207ENST00000487952 H7C2G1 150 aa8.61□□□□□ -1.03
NUP188-207ENST00000487952 ZNF861PO60384 105 aa8.61□□□□□ -1.03
NUP188-207ENST00000487952 PRLHP81277 87 aa8.61□□□□□ -1.03
NUP188-207ENST00000487952 Q1RN00 199 aa8.61□□□□□ -1.03
NUP188-207ENST00000487952 C6orf99Q4VX62 202 aa8.6□□□□□ -1.03
NUP188-207ENST00000487952 SMIM11BQ8TCY0 68 aa8.6□□□□□ -1.03
NUP188-207ENST00000487952 PRO1854Q9UHT4 67 aa8.6□□□□□ -1.03
NUP188-207ENST00000487952 SPINK6Q6UWN8 80 aa8.59□□□□□ -1.03
NUP188-207ENST00000487952 B5MCH6 92 aa8.58□□□□□ -1.04
NUP188-207ENST00000487952 KRTAP4-16G5E9R7 235 aaPredicted RBP8.58□□□□□ -1.04
NUP188-207ENST00000487952 COX7BP24311 80 aa8.58□□□□□ -1.04
NUP188-207ENST00000487952 VAMP3Q15836 100 aa8.58□□□□□ -1.04
NUP188-207ENST00000487952 FAT1Q14517 4588 aa8.58□□□□□ -1.04
NUP188-207ENST00000487952 A0A1B0GWB2 263 aa8.57□□□□□ -1.04
NUP188-207ENST00000487952 H0Y9J4 135 aa8.57□□□□□ -1.04
NUP188-207ENST00000487952 K7ERJ3 54 aa8.57□□□□□ -1.04
NUP188-207ENST00000487952 INAFM2P0DMQ5 153 aa8.57□□□□□ -1.04
NUP188-207ENST00000487952 BATFQ16520 125 aa8.57□□□□□ -1.04
NUP188-207ENST00000487952 Q6ZRX8 168 aa8.57□□□□□ -1.04
NUP188-207ENST00000487952 HIGD2AQ9BW72 106 aa8.57□□□□□ -1.04
NUP188-207ENST00000487952 HERC2O95714 4834 aa8.57□□□□□ -1.04
NUP188-207ENST00000487952 TRBV7-6A0A0J9YX20 115 aa8.56□□□□□ -1.04
NUP188-207ENST00000487952 KRTAP13-1Q8IUC0 172 aa8.56□□□□□ -1.04
NUP188-207ENST00000487952 VPS13BQ7Z7G8 4022 aa8.56□□□□□ -1.04
NUP188-207ENST00000487952 KRTAP4-5Q9BYR2 181 aa8.55□□□□□ -1.04
NUP188-207ENST00000487952 PCP4L1A6NKN8 68 aa8.54□□□□□ -1.04
NUP188-207ENST00000487952 ELOF1P60002 83 aaKnown RBP8.54□□□□□ -1.04
NUP188-207ENST00000487952 DHRS4-AS1Q9P1J3 65 aa8.53□□□□□ -1.04
NUP188-207ENST00000487952 SRRM2Q9UQ35 2752 aaKnown RBP8.53□□□□□ -1.04
NUP188-207ENST00000487952 PSMB2P49721 201 aa8.52□□□□□ -1.05
NUP188-207ENST00000487952 SMCR5Q8TEV8 140 aa8.52□□□□□ -1.05
NUP188-207ENST00000487952 SLC25A20O43772 301 aa8.51□□□□□ -1.05
NUP188-207ENST00000487952 Q9BRP9 147 aa8.51□□□□□ -1.05
NUP188-207ENST00000487952 ZNF706Q9Y5V0 76 aaPredicted RBP8.51□□□□□ -1.05
NUP188-207ENST00000487952 TSPAN13O95857 204 aa8.5□□□□□ -1.05
NUP188-207ENST00000487952 H0YGX0 51 aa8.49□□□□□ -1.05
NUP188-207ENST00000487952 COX6CP09669 75 aa8.49□□□□□ -1.05
NUP188-207ENST00000487952 TRIAP1O43715 76 aa8.48□□□□□ -1.05
NUP188-207ENST00000487952 SNCGO76070 127 aa8.48□□□□□ -1.05
NUP188-207ENST00000487952 ERC2-IT1O76042 136 aa8.47□□□□□ -1.05
NUP188-207ENST00000487952 SCGB1C2P0DMR2 95 aa8.46□□□□□ -1.06
NUP188-207ENST00000487952 LINC00575Q6W349 94 aa8.46□□□□□ -1.06
NUP188-207ENST00000487952 FLG2Q5D862 2391 aaPredicted RBP8.46□□□□□ -1.06
NUP188-207ENST00000487952 hADV29S1A0JD25 119 aa8.45□□□□□ -1.06
NUP188-207ENST00000487952 SPRR4Q96PI1 79 aa8.45□□□□□ -1.06
NUP188-207ENST00000487952 SNHG12Q9BXW3 62 aa8.45□□□□□ -1.06
NUP188-207ENST00000487952 GAGE2AQ6NT46 116 aa8.43□□□□□ -1.06
NUP188-207ENST00000487952 LYRM7Q5U5X0 104 aa8.42□□□□□ -1.06
NUP188-207ENST00000487952 ST20-AS1Q8NBB2 130 aa8.42□□□□□ -1.06
NUP188-207ENST00000487952 NAA38Q9BRA0 125 aaKnown RBP8.42□□□□□ -1.06
NUP188-207ENST00000487952 A0A1B0GX51 115 aa8.41□□□□□ -1.06
NUP188-207ENST00000487952 OXTP01178 125 aa8.41□□□□□ -1.06
NUP188-207ENST00000487952 KRTAP1-4P0C5Y4 121 aa8.41□□□□□ -1.06
NUP188-207ENST00000487952 COL5A1-AS1Q5SY13 56 aa8.41□□□□□ -1.06
NUP188-207ENST00000487952 DEFB105AQ8NG35 78 aa8.41□□□□□ -1.06
NUP188-207ENST00000487952 CLEC2BQ92478 149 aa8.41□□□□□ -1.06
NUP188-207ENST00000487952 FAM229BQ4G0N7 80 aa8.4□□□□□ -1.06
NUP188-207ENST00000487952 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.4□□□□□ -1.06
NUP188-207ENST00000487952 Q6ZQY7 126 aa8.4□□□□□ -1.06
NUP188-207ENST00000487952 FAM218AQ96MZ4 157 aa8.4□□□□□ -1.06
NUP188-207ENST00000487952 ANAPC11Q9NYG5 84 aa8.4□□□□□ -1.06
NUP188-207ENST00000487952 H3BUT2 72 aa8.39□□□□□ -1.07
NUP188-207ENST00000487952 TAX1BP3O14907 124 aa8.39□□□□□ -1.07
NUP188-207ENST00000487952 DNAL4O96015 105 aa8.39□□□□□ -1.07
NUP188-207ENST00000487952 CRYGAP11844 174 aa8.39□□□□□ -1.07
NUP188-207ENST00000487952 LINC01600Q96MT4 127 aa8.39□□□□□ -1.07
NUP188-207ENST00000487952 PKHD1L1Q86WI1 4243 aa8.39□□□□□ -1.07
NUP188-207ENST00000487952 TEX49A0A1B0GTD5 131 aa8.38□□□□□ -1.07
NUP188-207ENST00000487952 C9orf118A6NHY6 69 aa8.38□□□□□ -1.07
NUP188-207ENST00000487952 LINC00483Q53H64 154 aa8.38□□□□□ -1.07
NUP188-207ENST00000487952 PRR26Q8N8Z3 221 aa8.37□□□□□ -1.07
NUP188-207ENST00000487952 KRTAP29-1A8MX34 341 aaPredicted RBP8.36□□□□□ -1.07
NUP188-207ENST00000487952 GHRHP01286 108 aa8.36□□□□□ -1.07
NUP188-207ENST00000487952 OCIAD2Q56VL3 154 aa8.36□□□□□ -1.07
NUP188-207ENST00000487952 ABCA13Q86UQ4 5058 aa8.36□□□□□ -1.07
NUP188-207ENST00000487952 IGLV5-48A0A075B6I7 105 aa8.35□□□□□ -1.07
NUP188-207ENST00000487952 J3QL48 77 aa8.35□□□□□ -1.07
NUP188-207ENST00000487952 LST1O00453 97 aa8.35□□□□□ -1.07
NUP188-207ENST00000487952 SPRR1BP22528 89 aa8.35□□□□□ -1.07
NUP188-207ENST00000487952 LAMTOR3Q9UHA4 124 aa8.35□□□□□ -1.07
NUP188-207ENST00000487952 A0A087X002 238 aa8.34□□□□□ -1.07
NUP188-207ENST00000487952 TRACP01848 142 aa8.34□□□□□ -1.07
NUP188-207ENST00000487952 ATXN8Q156A1 80 aa8.34□□□□□ -1.07
NUP188-207ENST00000487952 TYMSOSQ8TAI1 123 aa8.34□□□□□ -1.07
NUP188-207ENST00000487952 IGLV9-49A0A0B4J1Y8 123 aa8.33□□□□□ -1.08
NUP188-207ENST00000487952 A0A1W2PPM0 123 aa8.33□□□□□ -1.08
NUP188-207ENST00000487952 FABP2P12104 132 aa8.33□□□□□ -1.08
NUP188-207ENST00000487952 LINC01547P58512 204 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms